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Literature summary extracted from

  • Sekhar, P.N.; Amrutha, R.N.; Sangam, S.; Verma, D.P.; Kishor, P.B.
    Biochemical characterization, homology modeling and docking studies of ornithine delta-aminotransferase - an important enzyme in proline biosynthesis of plants (2007), J. Mol. Graph. Model., 26, 709-719.
    View publication on PubMed

Activating Compound

EC Number Activating Compound Comment Organism Structure
2.6.1.13 pyridoxal 5'-phosphate omission from the reaction mixture reduces the activity by 60% Vigna aconitifolia

Cloned(Commentary)

EC Number Cloned (Comment) Organism
2.6.1.13 expression in Escherichia coli Vigna aconitifolia

Crystallization (Commentary)

EC Number Crystallization (Comment) Organism
2.6.1.13 homology modeling of crystal structure and flexible docking studies. G106 and K256 are the important residues in binding Vigna aconitifolia

Inhibitors

EC Number Inhibitors Comment Organism Structure
2.6.1.13 L-isoleucine
-
Vigna aconitifolia
2.6.1.13 L-serine
-
Vigna aconitifolia
2.6.1.13 L-valine
-
Vigna aconitifolia
2.6.1.13 additional information not inhibitory: proline Vigna aconitifolia

KM Value [mM]

EC Number KM Value [mM] KM Value Maximum [mM] Substrate Comment Organism Structure
2.6.1.13 0.75
-
2-oxoglutarate 25°C, pH 8.0 Vigna aconitifolia
2.6.1.13 2
-
L-ornithine 25°C, pH 8.0 Vigna aconitifolia

Molecular Weight [Da]

EC Number Molecular Weight [Da] Molecular Weight Maximum [Da] Comment Organism
2.6.1.13 48100
-
x * 48100, calculated Vigna aconitifolia

Organism

EC Number Organism UniProt Comment Textmining
2.6.1.13 Vigna aconitifolia P31893
-
-

Purification (Commentary)

EC Number Purification (Comment) Organism
2.6.1.13 recombinant protein Vigna aconitifolia

Substrates and Products (Substrate)

EC Number Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
2.6.1.13 L-ornithine + 2-oxoglutarate
-
Vigna aconitifolia L-glutamate + DELTA1-pyrroline-5-carboxylate
-
?

Subunits

EC Number Subunits Comment Organism
2.6.1.13 ? x * 48100, calculated Vigna aconitifolia

Temperature Optimum [°C]

EC Number Temperature Optimum [°C] Temperature Optimum Maximum [°C] Comment Organism
2.6.1.13 25
-
-
Vigna aconitifolia

pH Optimum

EC Number pH Optimum Minimum pH Optimum Maximum Comment Organism
2.6.1.13 8
-
-
Vigna aconitifolia