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Literature summary extracted from

  • Li, C.H.; Irmer, H.; Gudjonsdottir-Planck, D.; Freese, S.; Salm, H.; Haile, S.; Estevez, A.M.; Clayton, C.
    Roles of a Trypanosoma brucei 5->3 exoribonuclease homolog in mRNA degradation (2006), RNA, 12, 2171-2186.
    View publication on PubMedView publication on EuropePMC

Application

EC Number Application Comment Organism
3.1.16.1 additional information XRNA and XRND are required for trypanosome growth Trypanosoma brucei

Cloned(Commentary)

EC Number Cloned (Comment) Organism
3.1.16.1 His-tagged XRND protein expressed in Escherichia coli by cloning into pET3A vector Trypanosoma brucei

Inhibitors

EC Number Inhibitors Comment Organism Structure
3.1.16.1 RNAi down-regulation of expression by tetracycline-inducible RNA interference Trypanosoma brucei

Localization

EC Number Localization Comment Organism GeneOntology No. Textmining
3.1.16.1 cytoplasm XRNA, XRNB and XRNC Trypanosoma brucei 5737
-
3.1.16.1 nucleus XRNA and XRND Trypanosoma brucei 5634
-

Molecular Weight [Da]

EC Number Molecular Weight [Da] Molecular Weight Maximum [Da] Comment Organism
3.1.16.1 95000
-
XRNC Trypanosoma brucei
3.1.16.1 115000
-
XRNB Trypanosoma brucei
3.1.16.1 158000
-
XRNA Trypanosoma brucei

Organism

EC Number Organism UniProt Comment Textmining
3.1.16.1 Trypanosoma brucei
-
-
-

Purification (Commentary)

EC Number Purification (Comment) Organism
3.1.16.1 XRND purified by nickel affinity chromatography Trypanosoma brucei

Source Tissue

EC Number Source Tissue Comment Organism Textmining
3.1.16.1 additional information bloodstream forms and procyclic forms of trypanosomes Trypanosoma brucei
-

Substrates and Products (Substrate)

EC Number Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
3.1.16.1 mRNA + H2O XRNA is important in the degradation of deadenylated mRNAs in trypanosomes Trypanosoma brucei ?
-
?

Synonyms

EC Number Synonyms Comment Organism
3.1.16.1 5->3 exoribonuclease
-
Trypanosoma brucei
3.1.16.1 XRNA
-
Trypanosoma brucei
3.1.16.1 XRNB
-
Trypanosoma brucei
3.1.16.1 XRNC
-
Trypanosoma brucei
3.1.16.1 XRND
-
Trypanosoma brucei