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Literature summary extracted from

  • Lopez, Y.; Riano, N.; Mosquera, P.; Cadavid, A.; Arcila, J.
    Activities of phosphoenolpyruvate carboxylase and ribulose-1,5-bisphosphate carboxylase/oxygenase in leaves and fruit pericarp tissue of different coffee (Coffea sp.) genotypes (2000), Photosynthetica, 38, 215-220.
No PubMed abstract available

KM Value [mM]

EC Number KM Value [mM] KM Value Maximum [mM] Substrate Comment Organism Structure
4.1.1.39 0.00534
-
CO2 pH 7.8, 35°C Coffea arabica
4.1.1.39 0.00909
-
D-ribulose-1,5-bisphosphate pH 7.8, 35°C Coffea arabica

Natural Substrates/ Products (Substrates)

EC Number Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
4.1.1.39 D-ribulose 1,5-bisphosphate + CO2 + H2O Coffea arabica first step in net photosynthetic CO2 assimilation and photorespiratory carbon oxidation 3-phospho-D-glycerate
-
?
4.1.1.39 D-ribulose 1,5-bisphosphate + CO2 + H2O Coffea eugenioides first step in net photosynthetic CO2 assimilation and photorespiratory carbon oxidation 3-phospho-D-glycerate
-
?
4.1.1.39 D-ribulose 1,5-bisphosphate + CO2 + H2O Coffea congensis first step in net photosynthetic CO2 assimilation and photorespiratory carbon oxidation 3-phospho-D-glycerate
-
?
4.1.1.39 D-ribulose 1,5-bisphosphate + CO2 + H2O Coffea canephora first step in net photosynthetic CO2 assimilation and photorespiratory carbon oxidation 3-phospho-D-glycerate
-
?
4.1.1.39 D-ribulose 1,5-bisphosphate + CO2 + H2O Coffea stenophylla first step in net photosynthetic CO2 assimilation and photorespiratory carbon oxidation 3-phospho-D-glycerate
-
?

Organism

EC Number Organism UniProt Comment Textmining
4.1.1.39 Coffea arabica
-
coffee, cv Caturra, Colombia, Caturra erecta, San Pacho, Tipica, cv. Borbon
-
4.1.1.39 Coffea canephora
-
coffee, cv Arabusta, Coffea arabica cv Caturra x Coffea canephora and Hibrido de Timor
-
4.1.1.39 Coffea congensis
-
coffee
-
4.1.1.39 Coffea eugenioides
-
coffee
-
4.1.1.39 Coffea stenophylla
-
coffee
-

Purification (Commentary)

EC Number Purification (Comment) Organism
4.1.1.39 partial, cv Caturra Coffea arabica

Substrates and Products (Substrate)

EC Number Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
4.1.1.39 D-ribulose 1,5-bisphosphate + CO2 + H2O
-
Coffea arabica 3-phospho-D-glycerate
-
?
4.1.1.39 D-ribulose 1,5-bisphosphate + CO2 + H2O
-
Coffea eugenioides 3-phospho-D-glycerate
-
?
4.1.1.39 D-ribulose 1,5-bisphosphate + CO2 + H2O
-
Coffea congensis 3-phospho-D-glycerate
-
?
4.1.1.39 D-ribulose 1,5-bisphosphate + CO2 + H2O
-
Coffea canephora 3-phospho-D-glycerate
-
?
4.1.1.39 D-ribulose 1,5-bisphosphate + CO2 + H2O
-
Coffea stenophylla 3-phospho-D-glycerate
-
?
4.1.1.39 D-ribulose 1,5-bisphosphate + CO2 + H2O first step in net photosynthetic CO2 assimilation and photorespiratory carbon oxidation Coffea arabica 3-phospho-D-glycerate
-
?
4.1.1.39 D-ribulose 1,5-bisphosphate + CO2 + H2O first step in net photosynthetic CO2 assimilation and photorespiratory carbon oxidation Coffea eugenioides 3-phospho-D-glycerate
-
?
4.1.1.39 D-ribulose 1,5-bisphosphate + CO2 + H2O first step in net photosynthetic CO2 assimilation and photorespiratory carbon oxidation Coffea congensis 3-phospho-D-glycerate
-
?
4.1.1.39 D-ribulose 1,5-bisphosphate + CO2 + H2O first step in net photosynthetic CO2 assimilation and photorespiratory carbon oxidation Coffea canephora 3-phospho-D-glycerate
-
?
4.1.1.39 D-ribulose 1,5-bisphosphate + CO2 + H2O first step in net photosynthetic CO2 assimilation and photorespiratory carbon oxidation Coffea stenophylla 3-phospho-D-glycerate
-
?

Synonyms

EC Number Synonyms Comment Organism
4.1.1.39 ribulose-1,5-bisphosphate carboxylase/oxygenase
-
Coffea arabica
4.1.1.39 ribulose-1,5-bisphosphate carboxylase/oxygenase
-
Coffea eugenioides
4.1.1.39 ribulose-1,5-bisphosphate carboxylase/oxygenase
-
Coffea congensis
4.1.1.39 ribulose-1,5-bisphosphate carboxylase/oxygenase
-
Coffea canephora
4.1.1.39 ribulose-1,5-bisphosphate carboxylase/oxygenase
-
Coffea stenophylla
4.1.1.39 RuBPCO
-
Coffea arabica
4.1.1.39 RuBPCO
-
Coffea eugenioides
4.1.1.39 RuBPCO
-
Coffea congensis
4.1.1.39 RuBPCO
-
Coffea canephora
4.1.1.39 RuBPCO
-
Coffea stenophylla