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Literature summary extracted from

  • McFadden, B.A.; Tabita, F.R.; Kuehn, G.D.
    Ribulose-diphosphate carboxylase from the hydrogen bacteria and Rhodospirillum rubrum (1975), Methods Enzymol., 42C, 461-472.
    View publication on PubMed

Metals/Ions

EC Number Metals/Ions Comment Organism Structure
4.1.1.39 Co2+ activation Cupriavidus necator
4.1.1.39 Co2+ activation Rhodospirillum rubrum
4.1.1.39 Co2+ activation Acidovorax facilis

Molecular Weight [Da]

EC Number Molecular Weight [Da] Molecular Weight Maximum [Da] Comment Organism
4.1.1.39 56000
-
2 * 56000, SDS-PAGE Rhodospirillum rubrum
4.1.1.39 114000
-
light scattering Rhodospirillum rubrum
4.1.1.39 515000
-
sedimentation equilibrium centrifugation Cupriavidus necator
4.1.1.39 551000
-
sedimentation equilibrium centrifugation Acidovorax facilis

Natural Substrates/ Products (Substrates)

EC Number Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
4.1.1.39 D-Ribulose 1,5-bisphosphate + CO2 Cupriavidus necator
-
?
-
?
4.1.1.39 D-Ribulose 1,5-bisphosphate + CO2 Rhodospirillum rubrum
-
?
-
?
4.1.1.39 D-Ribulose 1,5-bisphosphate + CO2 Acidovorax facilis
-
?
-
?

Organism

EC Number Organism UniProt Comment Textmining
4.1.1.39 Acidovorax facilis
-
-
-
4.1.1.39 Cupriavidus necator
-
-
-
4.1.1.39 Rhodospirillum rubrum
-
-
-

Purification (Commentary)

EC Number Purification (Comment) Organism
4.1.1.39
-
Cupriavidus necator
4.1.1.39
-
Rhodospirillum rubrum
4.1.1.39
-
Acidovorax facilis

Reaction

EC Number Reaction Comment Organism Reaction ID
4.1.1.39 2 3-phospho-D-glycerate + 2 H+ = D-ribulose 1,5-bisphosphate + CO2 + H2O D-ribulose 1,5-bisphosphate + CO2 = 2 3-phospho-D-glycerate, carboxylase reaction Cupriavidus necator
4.1.1.39 2 3-phospho-D-glycerate + 2 H+ = D-ribulose 1,5-bisphosphate + CO2 + H2O D-ribulose 1,5-bisphosphate + CO2 = 2 3-phospho-D-glycerate, carboxylase reaction Rhodospirillum rubrum
4.1.1.39 2 3-phospho-D-glycerate + 2 H+ = D-ribulose 1,5-bisphosphate + CO2 + H2O D-ribulose 1,5-bisphosphate + CO2 = 2 3-phospho-D-glycerate, carboxylase reaction Acidovorax facilis

Substrates and Products (Substrate)

EC Number Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
4.1.1.39 D-Ribulose 1,5-bisphosphate + CO2
-
Cupriavidus necator D-3-Phosphoglycerate
-
?
4.1.1.39 D-Ribulose 1,5-bisphosphate + CO2
-
Rhodospirillum rubrum D-3-Phosphoglycerate
-
?
4.1.1.39 D-Ribulose 1,5-bisphosphate + CO2
-
Acidovorax facilis D-3-Phosphoglycerate
-
?
4.1.1.39 D-Ribulose 1,5-bisphosphate + CO2
-
Cupriavidus necator ?
-
?
4.1.1.39 D-Ribulose 1,5-bisphosphate + CO2
-
Rhodospirillum rubrum ?
-
?
4.1.1.39 D-Ribulose 1,5-bisphosphate + CO2
-
Acidovorax facilis ?
-
?

Subunits

EC Number Subunits Comment Organism
4.1.1.39 dimer 2 * 56000, SDS-PAGE Rhodospirillum rubrum

Turnover Number [1/s]

EC Number Turnover Number Minimum [1/s] Turnover Number Maximum [1/s] Substrate Comment Organism Structure
4.1.1.39 1.04
-
CO2
-
Acidovorax facilis
4.1.1.39 1.38
-
CO2
-
Cupriavidus necator
4.1.1.39 1.69
-
CO2
-
Rhodospirillum rubrum