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Literature summary extracted from

  • Johal, S.; Bourque, D.P.; Smith, W.W.; Suh, S.W.; Eisenberg, D.
    Crystallization and characterization of ribulose 1,5-bisphosphate carboxylase/oxygenase from eight plant species (1980), J. Biol. Chem., 255, 8873-8880.
    View publication on PubMed

Crystallization (Commentary)

EC Number Crystallization (Comment) Organism
4.1.1.39
-
 Spinacia oleracea
4.1.1.39
-
 Zea mays
4.1.1.39
-
 Solanum tuberosum
4.1.1.39
-
 Nicotiana tabacum
4.1.1.39
-
 Medicago sativa
4.1.1.39
-
 Solanum lycopersicum
4.1.1.39
-
 Gossypium hirsutum
4.1.1.39
-
 Nicotiana sylvestris

Natural Substrates/ Products (Substrates)

EC Number Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
4.1.1.39 D-Ribulose 1,5-bisphosphate + CO2 Spinacia oleracea
-
 ?
-
 ?
4.1.1.39 D-Ribulose 1,5-bisphosphate + CO2 Zea mays
-
 ?
-
 ?
4.1.1.39 D-Ribulose 1,5-bisphosphate + CO2 Solanum tuberosum
-
 ?
-
 ?
4.1.1.39 D-Ribulose 1,5-bisphosphate + CO2 Nicotiana tabacum
-
 ?
-
 ?
4.1.1.39 D-Ribulose 1,5-bisphosphate + CO2 Medicago sativa
-
 ?
-
 ?
4.1.1.39 D-Ribulose 1,5-bisphosphate + CO2 Solanum lycopersicum
-
 ?
-
 ?
4.1.1.39 D-Ribulose 1,5-bisphosphate + CO2 Gossypium hirsutum
-
 ?
-
 ?
4.1.1.39 D-Ribulose 1,5-bisphosphate + CO2 Nicotiana sylvestris
-
 ?
-
 ?

Organism

EC Number Organism UniProt Comment Textmining
4.1.1.39 Gossypium hirsutum
-
 cotton
-
4.1.1.39 Medicago sativa
-
 alfalfa
-
4.1.1.39 Nicotiana sylvestris
-
-
-
4.1.1.39 Nicotiana tabacum
-
-
-
4.1.1.39 Solanum lycopersicum
-
-
-
4.1.1.39 Solanum tuberosum
-
 potato
-
4.1.1.39 Spinacia oleracea
-
 spinach
-
4.1.1.39 Zea mays
-
 corn
-

Reaction

EC Number Reaction Comment Organism Reaction ID
4.1.1.39 2 3-phospho-D-glycerate + 2 H+ = D-ribulose 1,5-bisphosphate + CO2 + H2O D-ribulose 1,5-bisphosphate + CO2 = 2 3-phospho-D-glycerate, carboxylase reaction Spinacia oleracea
a
4.1.1.39 2 3-phospho-D-glycerate + 2 H+ = D-ribulose 1,5-bisphosphate + CO2 + H2O D-ribulose 1,5-bisphosphate + CO2 = 2 3-phospho-D-glycerate, carboxylase reaction Zea mays
a
4.1.1.39 2 3-phospho-D-glycerate + 2 H+ = D-ribulose 1,5-bisphosphate + CO2 + H2O D-ribulose 1,5-bisphosphate + CO2 = 2 3-phospho-D-glycerate, carboxylase reaction Solanum tuberosum
a
4.1.1.39 2 3-phospho-D-glycerate + 2 H+ = D-ribulose 1,5-bisphosphate + CO2 + H2O D-ribulose 1,5-bisphosphate + CO2 = 2 3-phospho-D-glycerate, carboxylase reaction Nicotiana tabacum
a
4.1.1.39 2 3-phospho-D-glycerate + 2 H+ = D-ribulose 1,5-bisphosphate + CO2 + H2O D-ribulose 1,5-bisphosphate + CO2 = 2 3-phospho-D-glycerate, carboxylase reaction Medicago sativa
a
4.1.1.39 2 3-phospho-D-glycerate + 2 H+ = D-ribulose 1,5-bisphosphate + CO2 + H2O D-ribulose 1,5-bisphosphate + CO2 = 2 3-phospho-D-glycerate, carboxylase reaction Solanum lycopersicum
a
4.1.1.39 2 3-phospho-D-glycerate + 2 H+ = D-ribulose 1,5-bisphosphate + CO2 + H2O D-ribulose 1,5-bisphosphate + CO2 = 2 3-phospho-D-glycerate, carboxylase reaction Gossypium hirsutum
a
4.1.1.39 2 3-phospho-D-glycerate + 2 H+ = D-ribulose 1,5-bisphosphate + CO2 + H2O D-ribulose 1,5-bisphosphate + CO2 = 2 3-phospho-D-glycerate, carboxylase reaction Nicotiana sylvestris
a
4.1.1.39 2 3-phospho-D-glycerate + 2 H+ = D-ribulose 1,5-bisphosphate + CO2 + H2O D-Ribulose 1,5-bisphosphate + O2 = D-3-phosphoglycerate + 2-phosphoglycolate, oxygenase reaction Spinacia oleracea
a
4.1.1.39 2 3-phospho-D-glycerate + 2 H+ = D-ribulose 1,5-bisphosphate + CO2 + H2O D-Ribulose 1,5-bisphosphate + O2 = D-3-phosphoglycerate + 2-phosphoglycolate, oxygenase reaction Zea mays
a
4.1.1.39 2 3-phospho-D-glycerate + 2 H+ = D-ribulose 1,5-bisphosphate + CO2 + H2O D-Ribulose 1,5-bisphosphate + O2 = D-3-phosphoglycerate + 2-phosphoglycolate, oxygenase reaction Solanum tuberosum
a
4.1.1.39 2 3-phospho-D-glycerate + 2 H+ = D-ribulose 1,5-bisphosphate + CO2 + H2O D-Ribulose 1,5-bisphosphate + O2 = D-3-phosphoglycerate + 2-phosphoglycolate, oxygenase reaction Nicotiana tabacum
a
4.1.1.39 2 3-phospho-D-glycerate + 2 H+ = D-ribulose 1,5-bisphosphate + CO2 + H2O D-Ribulose 1,5-bisphosphate + O2 = D-3-phosphoglycerate + 2-phosphoglycolate, oxygenase reaction Medicago sativa
a
4.1.1.39 2 3-phospho-D-glycerate + 2 H+ = D-ribulose 1,5-bisphosphate + CO2 + H2O D-Ribulose 1,5-bisphosphate + O2 = D-3-phosphoglycerate + 2-phosphoglycolate, oxygenase reaction Solanum lycopersicum
a
4.1.1.39 2 3-phospho-D-glycerate + 2 H+ = D-ribulose 1,5-bisphosphate + CO2 + H2O D-Ribulose 1,5-bisphosphate + O2 = D-3-phosphoglycerate + 2-phosphoglycolate, oxygenase reaction Gossypium hirsutum
a
4.1.1.39 2 3-phospho-D-glycerate + 2 H+ = D-ribulose 1,5-bisphosphate + CO2 + H2O D-Ribulose 1,5-bisphosphate + O2 = D-3-phosphoglycerate + 2-phosphoglycolate, oxygenase reaction Nicotiana sylvestris
a

Source Tissue

EC Number Source Tissue Comment Organism Textmining
4.1.1.39 leaf
-
 Spinacia oleracea
-
4.1.1.39 leaf
-
 Zea mays
-
4.1.1.39 leaf
-
 Solanum tuberosum
-
4.1.1.39 leaf
-
 Nicotiana tabacum
-
4.1.1.39 leaf
-
 Medicago sativa
-
4.1.1.39 leaf
-
 Solanum lycopersicum
-
4.1.1.39 leaf
-
 Gossypium hirsutum
-
4.1.1.39 leaf
-
 Nicotiana sylvestris
-

Specific Activity [micromol/min/mg]

EC Number Specific Activity Minimum [µmol/min/mg] Specific Activity Maximum [µmol/min/mg] Comment Organism
4.1.1.39 0.01
-
 oxygenase Gossypium hirsutum
4.1.1.39 0.02
-
 oxygenase Nicotiana tabacum
4.1.1.39 0.02
-
 oxygenase Solanum lycopersicum
4.1.1.39 0.03
-
 oxygenase Solanum tuberosum
4.1.1.39 0.04
-
 oxygenase Medicago sativa
4.1.1.39 0.08
-
 oxygenase Spinacia oleracea
4.1.1.39 0.08
-
 carboxylase Solanum lycopersicum
4.1.1.39 0.08
-
 carboxylase Gossypium hirsutum
4.1.1.39 0.17
-
 carboxylase Medicago sativa
4.1.1.39 0.18
-
 carboxylase Solanum tuberosum
4.1.1.39 0.19
-
 carboxylase Nicotiana tabacum
4.1.1.39 0.85
-
 carboxylase Spinacia oleracea

Substrates and Products (Substrate)

EC Number Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
4.1.1.39 D-Ribulose 1,5-bisphosphate + CO2
-
 Spinacia oleracea D-3-Phosphoglycerate
-
 ?
4.1.1.39 D-Ribulose 1,5-bisphosphate + CO2
-
 Zea mays D-3-Phosphoglycerate
-
 ?
4.1.1.39 D-Ribulose 1,5-bisphosphate + CO2
-
 Solanum tuberosum D-3-Phosphoglycerate
-
 ?
4.1.1.39 D-Ribulose 1,5-bisphosphate + CO2
-
 Nicotiana tabacum D-3-Phosphoglycerate
-
 ?
4.1.1.39 D-Ribulose 1,5-bisphosphate + CO2
-
 Medicago sativa D-3-Phosphoglycerate
-
 ?
4.1.1.39 D-Ribulose 1,5-bisphosphate + CO2
-
 Solanum lycopersicum D-3-Phosphoglycerate
-
 ?
4.1.1.39 D-Ribulose 1,5-bisphosphate + CO2
-
 Gossypium hirsutum D-3-Phosphoglycerate
-
 ?
4.1.1.39 D-Ribulose 1,5-bisphosphate + CO2
-
 Nicotiana sylvestris D-3-Phosphoglycerate
-
 ?
4.1.1.39 D-Ribulose 1,5-bisphosphate + CO2
-
 Spinacia oleracea ?
-
 ?
4.1.1.39 D-Ribulose 1,5-bisphosphate + CO2
-
 Zea mays ?
-
 ?
4.1.1.39 D-Ribulose 1,5-bisphosphate + CO2
-
 Solanum tuberosum ?
-
 ?
4.1.1.39 D-Ribulose 1,5-bisphosphate + CO2
-
 Nicotiana tabacum ?
-
 ?
4.1.1.39 D-Ribulose 1,5-bisphosphate + CO2
-
 Medicago sativa ?
-
 ?
4.1.1.39 D-Ribulose 1,5-bisphosphate + CO2
-
 Solanum lycopersicum ?
-
 ?
4.1.1.39 D-Ribulose 1,5-bisphosphate + CO2
-
 Gossypium hirsutum ?
-
 ?
4.1.1.39 D-Ribulose 1,5-bisphosphate + CO2
-
 Nicotiana sylvestris ?
-
 ?
4.1.1.39 D-Ribulose 1,5-bisphosphate + O2
-
 Spinacia oleracea D-3-Phosphoglycerate + 2-phosphoglycolate
-
 ?
4.1.1.39 D-Ribulose 1,5-bisphosphate + O2
-
 Zea mays D-3-Phosphoglycerate + 2-phosphoglycolate
-
 ?
4.1.1.39 D-Ribulose 1,5-bisphosphate + O2
-
 Solanum tuberosum D-3-Phosphoglycerate + 2-phosphoglycolate
-
 ?
4.1.1.39 D-Ribulose 1,5-bisphosphate + O2
-
 Nicotiana tabacum D-3-Phosphoglycerate + 2-phosphoglycolate
-
 ?
4.1.1.39 D-Ribulose 1,5-bisphosphate + O2
-
 Medicago sativa D-3-Phosphoglycerate + 2-phosphoglycolate
-
 ?
4.1.1.39 D-Ribulose 1,5-bisphosphate + O2
-
 Solanum lycopersicum D-3-Phosphoglycerate + 2-phosphoglycolate
-
 ?
4.1.1.39 D-Ribulose 1,5-bisphosphate + O2
-
 Gossypium hirsutum D-3-Phosphoglycerate + 2-phosphoglycolate
-
 ?
4.1.1.39 D-Ribulose 1,5-bisphosphate + O2
-
 Nicotiana sylvestris D-3-Phosphoglycerate + 2-phosphoglycolate
-
 ?