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Literature summary extracted from
- tRNA 3' end maturation in archaea has eukaryotic features: the RNase Z from Haloferax volcanii (2002), J. Mol. Biol., 316, 895-902.
Localization
| EC Number | Localization | Comment | Organism | GeneOntology No. | Textmining |
|---|---|---|---|---|---|
| 3.1.26.11 | soluble | - |
Haloferax volcanii | - |
- |
Metals/Ions
| EC Number | Metals/Ions | Comment | Organism | Structure |
|---|---|---|---|---|
| 3.1.26.11 | K+ | - |
Triticum aestivum |  |
| 3.1.26.11 | K+ | optimum at 100 mM | Xenopus laevis | |
| 3.1.26.11 | K+ | optimum at 10-25 mM | Rattus norvegicus | |
| 3.1.26.11 | K+ | optimum at 5 mM | Haloferax volcanii | |
| 3.1.26.11 | K+ | optimum at 30 mM | Solanum tuberosum | |
| 3.1.26.11 | Mg2+ | optimum at 5 mM | Haloferax volcanii | |
| 3.1.26.11 | Mg2+ | optimum at 1-5 mM | Xenopus laevis | |
| 3.1.26.11 | Mg2+ | 5 mM, mitochondrial RNase Z | Triticum aestivum | |
| 3.1.26.11 | Mg2+ | 5 mM, mitochondrial RNase Z | Solanum tuberosum | |
| 3.1.26.11 | Mg2+ | optimum at 0-2 mM | Rattus norvegicus | |
Organism
| EC Number | Organism | UniProt | Comment | Textmining |
|---|---|---|---|---|
| 3.1.26.11 | Haloferax volcanii | - |
- |
- |
| 3.1.26.11 | Rattus norvegicus | - |
- |
- |
| 3.1.26.11 | Solanum tuberosum | - |
- |
- |
| 3.1.26.11 | Triticum aestivum | - |
- |
- |
| 3.1.26.11 | Xenopus laevis | - |
- |
- |
Purification (Commentary)
| EC Number | Purification (Comment) | Organism |
|---|---|---|
| 3.1.26.11 | - |
Haloferax volcanii |
Substrates and Products (Substrate)
| EC Number | Substrates | Comment Substrates | Organism | Products | Comment (Products) | Rev. | Reac. |
|---|---|---|---|---|---|---|---|
| 3.1.26.11 | tRNA T3 + H2O | tRNA variant without the anticodon arm | Haloferax volcanii | ? | - |
? | |
| 3.1.26.11 | tRNA T6 + H2O | tRNA variant without the anticodon arm | Haloferax volcanii | ? | - |
? | |
Temperature Optimum [°C]
| EC Number | Temperature Optimum [°C] | Temperature Optimum Maximum [°C] | Comment | Organism |
|---|---|---|---|---|
| 3.1.26.11 | 30 | - |
- |
Triticum aestivum |
| 3.1.26.11 | 30 | - |
- |
Solanum tuberosum |
| 3.1.26.11 | 35 | - |
- |
Triticum aestivum |
| 3.1.26.11 | 37 | - |
- |
Rattus norvegicus |
| 3.1.26.11 | 37 | - |
- |
Xenopus laevis |
| 3.1.26.11 | 40 | - |
- |
Haloferax volcanii |
pH Optimum
| EC Number | pH Optimum Minimum | pH Optimum Maximum | Comment | Organism |
|---|---|---|---|---|
| 3.1.26.11 | 5.5 | - |
- |
Haloferax volcanii |
| 3.1.26.11 | 6.5 | 8.5 | - |
Xenopus laevis |
| 3.1.26.11 | 7.2 | - |
- |
Rattus norvegicus |
| 3.1.26.11 | 8 | - |
- |
Triticum aestivum |
| 3.1.26.11 | 8 | - |
- |
Solanum tuberosum |
| 3.1.26.11 | 8.4 | - |
- |
Triticum aestivum |
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Release 2023.1 (January 2023)
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