BRENDA - Enzyme Database

Agmatine deiminase in rice seedlings

Chaudhuri, M.M.; Ghosh, B.; Phytochemistry 24, 2433-2435 (1985)
No PubMed abstract available

Data extracted from this reference:

Inhibitors
EC Number
Inhibitors
Commentary
Organism
Structure
3.5.3.12
Ba2+
-
Oryza sativa
3.5.3.12
Ca2+
-
Oryza sativa
3.5.3.12
Ca2+
-
Zea mays
3.5.3.12
cadaverine
-
Arachis hypogaea
3.5.3.12
Mg2+
-
Oryza sativa
3.5.3.12
Mg2+
-
Zea mays
3.5.3.12
Mn2+
-
Oryza sativa
3.5.3.12
putrescine
-
Arachis hypogaea
3.5.3.12
spermidine
-
Arachis hypogaea
3.5.3.12
spermidine
-
Oryza sativa
3.5.3.12
spermine
-
Arachis hypogaea
3.5.3.12
spermine
-
Oryza sativa
3.5.3.12
tryptamine
-
Arachis hypogaea
KM Value [mM]
EC Number
KM Value [mM]
KM Value Maximum [mM]
Substrate
Commentary
Organism
Structure
3.5.3.12
15
-
agmatine
-
Oryza sativa
Molecular Weight [Da]
EC Number
Molecular Weight [Da]
Molecular Weight Maximum [Da]
Commentary
Organism
3.5.3.12
95000
-
2 * 95000, SDS-PAGE
Oryza sativa
3.5.3.12
183000
-
gel filtration
Oryza sativa
Natural Substrates/ Products (Substrates)
EC Number
Natural Substrates
Organism
Commentary (Nat. Sub.)
Natural Products
Commentary (Nat. Pro.)
Organism (Nat. Pro.)
Reversibility
3.5.3.12
agmatine + H2O
Hordeum vulgare
-
N-carbamoylputrescine + NH3
-
-
?
3.5.3.12
agmatine + H2O
Zea mays
-
N-carbamoylputrescine + NH3
-
-
?
3.5.3.12
agmatine + H2O
Nicotiana tabacum
-
N-carbamoylputrescine + NH3
-
-
?
3.5.3.12
agmatine + H2O
Arachis hypogaea
-
N-carbamoylputrescine + NH3
-
-
?
3.5.3.12
agmatine + H2O
Helianthus annuus
-
N-carbamoylputrescine + NH3
-
-
?
3.5.3.12
agmatine + H2O
Oryza sativa
-
N-carbamoylputrescine + NH3
-
-
?
Organism
EC Number
Organism
Primary Accession No. (UniProt)
Commentary
Textmining
3.5.3.12
Arachis hypogaea
-
-
-
3.5.3.12
Helianthus annuus
-
-
-
3.5.3.12
Hordeum vulgare
-
-
-
3.5.3.12
Nicotiana tabacum
-
-
-
3.5.3.12
Oryza sativa
-
rice
-
3.5.3.12
Zea mays
-
-
-
Purification (Commentary)
EC Number
Commentary
Organism
3.5.3.12
-
Oryza sativa
3.5.3.12
-
Zea mays
Source Tissue
EC Number
Source Tissue
Commentary
Organism
Textmining
3.5.3.12
cotyledon
-
Arachis hypogaea
-
3.5.3.12
embryo
-
Oryza sativa
-
3.5.3.12
leaf
-
Arachis hypogaea
-
3.5.3.12
leaf
-
Zea mays
-
3.5.3.12
seedling
-
Helianthus annuus
-
3.5.3.12
seedling
-
Oryza sativa
-
3.5.3.12
seedling
-
Zea mays
-
Specific Activity [micromol/min/mg]
EC Number
Specific Activity Minimum [µmol/min/mg]
Specific Activity Maximum [µmol/min/mg]
Commentary
Organism
3.5.3.12
47.31
-
-
Oryza sativa
Storage Stability
EC Number
Storage Stability
Organism
3.5.3.12
-20°C purified enzyme lost 40% activity within 15 days
Oryza sativa
Substrates and Products (Substrate)
EC Number
Substrates
Commentary Substrates
Literature (Substrates)
Organism
Products
Commentary (Products)
Literature (Products)
Organism (Products)
Reversibility
3.5.3.12
agmatine + H2O
-
209402
Hordeum vulgare
N-carbamoylputrescine + NH3
-
-
-
?
3.5.3.12
agmatine + H2O
-
209402
Zea mays
N-carbamoylputrescine + NH3
-
-
-
?
3.5.3.12
agmatine + H2O
-
209402
Nicotiana tabacum
N-carbamoylputrescine + NH3
-
-
-
?
3.5.3.12
agmatine + H2O
-
209402
Arachis hypogaea
N-carbamoylputrescine + NH3
-
-
-
?
3.5.3.12
agmatine + H2O
-
209402
Helianthus annuus
N-carbamoylputrescine + NH3
-
-
-
?
3.5.3.12
agmatine + H2O
-
209402
Oryza sativa
N-carbamoylputrescine + NH3
-
-
-
?
Subunits
EC Number
Subunits
Commentary
Organism
3.5.3.12
dimer
2 * 95000, SDS-PAGE
Oryza sativa
3.5.3.12
dimer
-
Zea mays
Temperature Optimum [°C]
EC Number
Temperature Optimum [°C]
Temperature Optimum Maximum [°C]
Commentary
Organism
3.5.3.12
28
-
-
Oryza sativa
pH Optimum
EC Number
pH Optimum Minimum
pH Optimum Maximum
Commentary
Organism
3.5.3.12
6
-
-
Oryza sativa
Inhibitors (protein specific)
EC Number
Inhibitors
Commentary
Organism
Structure
3.5.3.12
Ba2+
-
Oryza sativa
3.5.3.12
Ca2+
-
Oryza sativa
3.5.3.12
Ca2+
-
Zea mays
3.5.3.12
cadaverine
-
Arachis hypogaea
3.5.3.12
Mg2+
-
Oryza sativa
3.5.3.12
Mg2+
-
Zea mays
3.5.3.12
Mn2+
-
Oryza sativa
3.5.3.12
putrescine
-
Arachis hypogaea
3.5.3.12
spermidine
-
Arachis hypogaea
3.5.3.12
spermidine
-
Oryza sativa
3.5.3.12
spermine
-
Arachis hypogaea
3.5.3.12
spermine
-
Oryza sativa
3.5.3.12
tryptamine
-
Arachis hypogaea
KM Value [mM] (protein specific)
EC Number
KM Value [mM]
KM Value Maximum [mM]
Substrate
Commentary
Organism
Structure
3.5.3.12
15
-
agmatine
-
Oryza sativa
Molecular Weight [Da] (protein specific)
EC Number
Molecular Weight [Da]
Molecular Weight Maximum [Da]
Commentary
Organism
3.5.3.12
95000
-
2 * 95000, SDS-PAGE
Oryza sativa
3.5.3.12
183000
-
gel filtration
Oryza sativa
Natural Substrates/ Products (Substrates) (protein specific)
EC Number
Natural Substrates
Organism
Commentary (Nat. Sub.)
Natural Products
Commentary (Nat. Pro.)
Organism (Nat. Pro.)
Reversibility
3.5.3.12
agmatine + H2O
Hordeum vulgare
-
N-carbamoylputrescine + NH3
-
-
?
3.5.3.12
agmatine + H2O
Zea mays
-
N-carbamoylputrescine + NH3
-
-
?
3.5.3.12
agmatine + H2O
Nicotiana tabacum
-
N-carbamoylputrescine + NH3
-
-
?
3.5.3.12
agmatine + H2O
Arachis hypogaea
-
N-carbamoylputrescine + NH3
-
-
?
3.5.3.12
agmatine + H2O
Helianthus annuus
-
N-carbamoylputrescine + NH3
-
-
?
3.5.3.12
agmatine + H2O
Oryza sativa
-
N-carbamoylputrescine + NH3
-
-
?
Purification (Commentary) (protein specific)
EC Number
Commentary
Organism
3.5.3.12
-
Oryza sativa
3.5.3.12
-
Zea mays
Source Tissue (protein specific)
EC Number
Source Tissue
Commentary
Organism
Textmining
3.5.3.12
cotyledon
-
Arachis hypogaea
-
3.5.3.12
embryo
-
Oryza sativa
-
3.5.3.12
leaf
-
Arachis hypogaea
-
3.5.3.12
leaf
-
Zea mays
-
3.5.3.12
seedling
-
Helianthus annuus
-
3.5.3.12
seedling
-
Oryza sativa
-
3.5.3.12
seedling
-
Zea mays
-
Specific Activity [micromol/min/mg] (protein specific)
EC Number
Specific Activity Minimum [µmol/min/mg]
Specific Activity Maximum [µmol/min/mg]
Commentary
Organism
3.5.3.12
47.31
-
-
Oryza sativa
Storage Stability (protein specific)
EC Number
Storage Stability
Organism
3.5.3.12
-20°C purified enzyme lost 40% activity within 15 days
Oryza sativa
Substrates and Products (Substrate) (protein specific)
EC Number
Substrates
Commentary Substrates
Literature (Substrates)
Organism
Products
Commentary (Products)
Literature (Products)
Organism (Products)
Reversibility
3.5.3.12
agmatine + H2O
-
209402
Hordeum vulgare
N-carbamoylputrescine + NH3
-
-
-
?
3.5.3.12
agmatine + H2O
-
209402
Zea mays
N-carbamoylputrescine + NH3
-
-
-
?
3.5.3.12
agmatine + H2O
-
209402
Nicotiana tabacum
N-carbamoylputrescine + NH3
-
-
-
?
3.5.3.12
agmatine + H2O
-
209402
Arachis hypogaea
N-carbamoylputrescine + NH3
-
-
-
?
3.5.3.12
agmatine + H2O
-
209402
Helianthus annuus
N-carbamoylputrescine + NH3
-
-
-
?
3.5.3.12
agmatine + H2O
-
209402
Oryza sativa
N-carbamoylputrescine + NH3
-
-
-
?
Subunits (protein specific)
EC Number
Subunits
Commentary
Organism
3.5.3.12
dimer
2 * 95000, SDS-PAGE
Oryza sativa
3.5.3.12
dimer
-
Zea mays
Temperature Optimum [°C] (protein specific)
EC Number
Temperature Optimum [°C]
Temperature Optimum Maximum [°C]
Commentary
Organism
3.5.3.12
28
-
-
Oryza sativa
pH Optimum (protein specific)
EC Number
pH Optimum Minimum
pH Optimum Maximum
Commentary
Organism
3.5.3.12
6
-
-
Oryza sativa