Literature summary extracted from
Cheng, C.; Shuman, S.
Characterization of an ATP-dependent DNA ligase encoded by Haemophilus influenzae (1997), Nucleic Acids Res., 25, 1369-1374.
Cloned(Commentary)
EC Number |
Cloned (Comment) |
Organism |
---|
6.5.1.1 |
expression in Escherichia coli BL21 |
Haemophilus influenzae |
KM Value [mM]
EC Number |
KM Value [mM] |
KM Value Maximum [mM] |
Substrate |
Comment |
Organism |
Structure |
---|
6.5.1.1 |
0.0002 |
0.0015 |
ATP |
ATP |
Haemophilus influenzae |
|
Metals/Ions
EC Number |
Metals/Ions |
Comment |
Organism |
Structure |
---|
6.5.1.1 |
Mg2+ |
Mn2+ is more effective than Mg2+ at 0.5-1 mM |
Haemophilus influenzae |
|
6.5.1.1 |
Mg2+ |
Mn2+ or Mn2+ required |
Haemophilus influenzae |
|
6.5.1.1 |
Mn2+ |
Mg2+ or Mn2+ required |
Haemophilus influenzae |
|
6.5.1.1 |
Mn2+ |
Mn2+ is more effective than Mg2+ at 0.5-1 mM |
Haemophilus influenzae |
|
Organism
EC Number |
Organism |
UniProt |
Comment |
Textmining |
---|
6.5.1.1 |
Haemophilus influenzae |
- |
- |
- |
Reaction
EC Number |
Reaction |
Comment |
Organism |
Reaction ID |
---|
6.5.1.1 |
ATP + (deoxyribonucleotide)n-3'-hydroxyl + 5'-phospho-(deoxyribonucleotide)m = (deoxyribonucleotide)n+m + AMP + diphosphate |
initial step in DNA ligation is the formation of a covalent enzyme-adenylate intermediate |
Haemophilus influenzae |
|
Substrates and Products (Substrate)
EC Number |
Substrates |
Comment Substrates |
Organism |
Products |
Comment (Products) |
Rev. |
Reac. |
---|
6.5.1.1 |
ATP + (deoxyribonucleotide)n + (deoxyribonucleotide)m |
efficient strand joining on a single nicked DNA |
Haemophilus influenzae |
AMP + diphosphate + (deoxyribonucleotide)n+m |
- |
? |
|