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Literature summary extracted from

  • Keir, H.M.; Mathog, R.H.; Carter, C.E.
    Purification of a potassium ion-activated RNA, 5'-phosphodiesterase from Lactobacillus casei (1964), Biochemistry, 3, 1188-1193.
    View publication on PubMed

Application

EC Number Application Comment Organism
3.1.13.1 analysis
-
Lacticaseibacillus casei

Localization

EC Number Localization Comment Organism GeneOntology No. Textmining
3.1.13.1 ribosome
-
Lacticaseibacillus casei 5840
-

Metals/Ions

EC Number Metals/Ions Comment Organism Structure
3.1.13.1 K+ activating Lacticaseibacillus casei
3.1.13.1 K+ maximum concentration for activation: 0.15 mM at pH 7.4 and 8.0 Lacticaseibacillus casei
3.1.13.1 NH4+ can substitute for K+ to a small extend Lacticaseibacillus casei

Natural Substrates/ Products (Substrates)

EC Number Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
3.1.13.1 ss RNA + H2O Lacticaseibacillus casei
-
5'-phosphomononucleotides
-
?

Organism

EC Number Organism UniProt Comment Textmining
3.1.13.1 Lacticaseibacillus casei
-
-
-

Purification (Commentary)

EC Number Purification (Comment) Organism
3.1.13.1 28.6fold Lacticaseibacillus casei

Reaction

EC Number Reaction Comment Organism Reaction ID
3.1.13.1 Exonucleolytic cleavage in the 3'- to 5'- direction to yield nucleoside 5'-phosphates can act as a endonuclease too Lacticaseibacillus casei

Storage Stability

EC Number Storage Stability Organism
3.1.13.1 -10°C, 1.5 ml aliquots, 1 mg of protein per ml, 6 months, small decrease of activity Lacticaseibacillus casei

Substrates and Products (Substrate)

EC Number Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
3.1.13.1 ss RNA + H2O
-
Lacticaseibacillus casei 5'-phosphomononucleotides
-
?

pH Optimum

EC Number pH Optimum Minimum pH Optimum Maximum Comment Organism
3.1.13.1 7.4
-
minor pH optimum Lacticaseibacillus casei
3.1.13.1 8 8.2
-
Lacticaseibacillus casei