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Literature summary for 7.6.2.9 extracted from

  • Pittelkow, M.; Tschapek, B.; Smits, S.H.; Schmitt, L.; Bremer, E.
    The crystal structure of the substrate-binding protein OpuBC from Bacillus subtilis in complex with choline (2011), J. Mol. Biol., 411, 53-67.
    View publication on PubMed

Crystallization (Commentary)

Crystallization (Comment) Organism
substrate-binding protein OpuBC in complex with choline, to 1.6 A resolution. The positively charged trimethylammonium head group of choline is wedged into an aromatic cage formed by four tyrosine residues and is bound via cation-pi interactions. The hydroxyl group of choline protrudes out of this aromatic cage and makes a single interaction with residue Gln19. A water network stabilizes choline within its substrate-binding site and promotes indirect interactions between the two lobes of the OpuBC protein. Disruption of this intricate water network strongly reduces choline binding affinity or abrogates ligand binding Bacillus subtilis

Protein Variants

Protein Variants Comment Organism
D149A decrease in choline binding affinity by approximately 18fold Bacillus subtilis
D149A/L155A decrease in choline binding affinity by approximately 38fold Bacillus subtilis
D74A mutant is unable to bind choline Bacillus subtilis
L155A decrease in choline binding affinity by approximately 25fold Bacillus subtilis
M21A decrease in choline binding affinity by approximately 3fold Bacillus subtilis
N115A mutant is unable to bind choline Bacillus subtilis
Q19A decrease in choline binding affinity by approximately 15fold Bacillus subtilis
Q19A/L155A mutant is unable to bind choline Bacillus subtilis

Organism

Organism UniProt Comment Textmining
Bacillus subtilis Q45462 choline-binding protein
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Bacillus subtilis JH642 Q45462 choline-binding protein
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Synonyms

Synonyms Comment Organism
OpuBC
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Bacillus subtilis