Any feedback?
Please rate this page
(literature.php)
(0/150)

BRENDA support

Literature summary for 7.4.2.6 extracted from

  • Lee, E.; Ahn, S.; Park, J.; Lee, J.; Ahn, S.; Kong, I.
    Identification of oligopeptide permease (opp) gene cluster in Vibrio fluvialis and characterization of biofilm production by oppA knockout mutation (2004), FEMS Microbiol. Lett., 240, 21-30.
    View publication on PubMed

Cloned(Commentary)

Cloned (Comment) Organism
library construction and subcloning in Escherichia coli strains XL-1 Blue and SM10, opp gene cluster encoding five isozymes OppA, OppB, OppC, OppD, and OppF, DNA and amino acid sequence determination and analysis Vibrio fluvialis
library construction and subcloning in Escherichia coli strains XL-1 Blue and SM10, opp gene cluster encoding five isozymes OppA, OppB, OppC, OppD, and OppF, DNA and amino acid sequence determination and analysis, expression in Vibrio fluvialis and Escherichia coli Vibrio fluvialis

Protein Variants

Protein Variants Comment Organism
additional information construction of an oppA knockout mutant by homologous recombination, the mutant strain produced more abundant biofilm than the wild-type strain in brain-heart infusion medium, while both strains do not produce a biofilm at all in minimal medium, the phenotype can be restored by expression of oppA ORF plus promoter, overview Vibrio fluvialis

Natural Substrates/ Products (Substrates)

Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
additional information Vibrio fluvialis isozyme OppA is involved in biofilm formation in Vibrio fluvialis ?
-
?
additional information Vibrio fluvialis KCTC 2473 / ATCC 33809 isozyme OppA is involved in biofilm formation in Vibrio fluvialis ?
-
?

Organism

Organism UniProt Comment Textmining
Vibrio fluvialis Q5V9R8 OppF; opp gene cluster encoding five isozymes including OppF
-
Vibrio fluvialis Q5V9R9 OppD; opp gene cluster encoding five isozymes including OppD
-
Vibrio fluvialis Q5V9S0 OppC; opp gene cluster encoding five isozymes including OppC
-
Vibrio fluvialis Q5V9S1 OppB; opp gene cluster encoding five isozymes including OppB
-
Vibrio fluvialis Q5V9S2 OppA; opp gene cluster encoding five isozymes including OppA
-
Vibrio fluvialis KCTC 2473 / ATCC 33809 Q5V9R8 OppF; opp gene cluster encoding five isozymes including OppF
-
Vibrio fluvialis KCTC 2473 / ATCC 33809 Q5V9R9 OppD; opp gene cluster encoding five isozymes including OppD
-
Vibrio fluvialis KCTC 2473 / ATCC 33809 Q5V9S0 OppC; opp gene cluster encoding five isozymes including OppC
-
Vibrio fluvialis KCTC 2473 / ATCC 33809 Q5V9S1 OppB; opp gene cluster encoding five isozymes including OppB
-
Vibrio fluvialis KCTC 2473 / ATCC 33809 Q5V9S2 OppA; opp gene cluster encoding five isozymes including OppA
-

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
additional information isozyme OppA is involved in biofilm formation in Vibrio fluvialis Vibrio fluvialis ?
-
?
additional information isozyme OppA is involved in biofilm formation in Vibrio fluvialis Vibrio fluvialis KCTC 2473 / ATCC 33809 ?
-
?

Synonyms

Synonyms Comment Organism
oligopeptide permease
-
Vibrio fluvialis
Opp
-
Vibrio fluvialis

Temperature Optimum [°C]

Temperature Optimum [°C] Temperature Optimum Maximum [°C] Comment Organism
37
-
biofilm assay at Vibrio fluvialis