BRENDA - Enzyme Database show
show all sequences of 6.3.5.7

Two enzymes bound to one transfer RNA assume alternative conformations for consecutive reactions

Ito, T.; Yokoyama, S.; Nature 467, 612-616 (2010)

Data extracted from this reference:

Cloned(Commentary)
Commentary
Organism
overexpressed in Escherichia coli
Thermotoga maritima
Crystallization (Commentary)
Crystallization
Organism
the glutamine transamidosome complex consisting of tRNAGln, glutamyltRNA synthase (GluRS) and the heterotrimeric amidotransferase GatCAB is crystalyzed at 3.35 A. Crystals are grown by the sitting-drop vapour-diffusion method at 20C
Thermotoga maritima
Organism
Organism
Primary Accession No. (UniProt)
Commentary
Textmining
Thermotoga maritima
Q9X0Z9
-
-
Purification (Commentary)
Commentary
Organism
using heat treatment and column chromatography
Thermotoga maritima
Cloned(Commentary) (protein specific)
Commentary
Organism
overexpressed in Escherichia coli
Thermotoga maritima
Crystallization (Commentary) (protein specific)
Crystallization
Organism
the glutamine transamidosome complex consisting of tRNAGln, glutamyltRNA synthase (GluRS) and the heterotrimeric amidotransferase GatCAB is crystalyzed at 3.35 A. Crystals are grown by the sitting-drop vapour-diffusion method at 20C
Thermotoga maritima
Purification (Commentary) (protein specific)
Commentary
Organism
using heat treatment and column chromatography
Thermotoga maritima
General Information
General Information
Commentary
Organism
physiological function
using gel mobility shift assays it is shown that formation of the glutamine transamidosome from Thermotoga maritima, consists of tRNAGln, glutamyltRNA synthase (GluRS) and the heterotrimeric amidotransferase GatCAB. The tail body of GatCAB recognizes the outer corner of the L-shaped tRNAGln in a tRNAGln-specific manner. GatCAB is in the non-productive form: the catalytic body of GatCAB contacts that of GluRS and is located near the acceptor stem of tRNAGln, in an appropriate site to wait for the completion of Glu-tRNAGln formation by GluRS. Hinges are identified between the catalytic and anticodon-binding bodies of GluRS and between the catalytic and tail bodies of GatCAB, which allow both GluRS and GatCAB to adopt the productive and non-productive forms
Thermotoga maritima
General Information (protein specific)
General Information
Commentary
Organism
physiological function
using gel mobility shift assays it is shown that formation of the glutamine transamidosome from Thermotoga maritima, consists of tRNAGln, glutamyltRNA synthase (GluRS) and the heterotrimeric amidotransferase GatCAB. The tail body of GatCAB recognizes the outer corner of the L-shaped tRNAGln in a tRNAGln-specific manner. GatCAB is in the non-productive form: the catalytic body of GatCAB contacts that of GluRS and is located near the acceptor stem of tRNAGln, in an appropriate site to wait for the completion of Glu-tRNAGln formation by GluRS. Hinges are identified between the catalytic and anticodon-binding bodies of GluRS and between the catalytic and tail bodies of GatCAB, which allow both GluRS and GatCAB to adopt the productive and non-productive forms
Thermotoga maritima
Other publictions for EC 6.3.5.7
No.
1st author
Pub Med
title
organims
journal
volume
pages
year
Activating Compound
Application
Cloned(Commentary)
Crystallization (Commentary)
Engineering
General Stability
Inhibitors
KM Value [mM]
Localization
Metals/Ions
Molecular Weight [Da]
Natural Substrates/ Products (Substrates)
Organic Solvent Stability
Organism
Oxidation Stability
Posttranslational Modification
Purification (Commentary)
Reaction
Renatured (Commentary)
Source Tissue
Specific Activity [micromol/min/mg]
Storage Stability
Substrates and Products (Substrate)
Subunits
Temperature Optimum [C]
Temperature Range [C]
Temperature Stability [C]
Turnover Number [1/s]
pH Optimum
pH Range
pH Stability
Cofactor
Ki Value [mM]
pI Value
IC50 Value
Activating Compound (protein specific)
Application (protein specific)
Cloned(Commentary) (protein specific)
Cofactor (protein specific)
Crystallization (Commentary) (protein specific)
Engineering (protein specific)
General Stability (protein specific)
IC50 Value (protein specific)
Inhibitors (protein specific)
Ki Value [mM] (protein specific)
KM Value [mM] (protein specific)
Localization (protein specific)
Metals/Ions (protein specific)
Molecular Weight [Da] (protein specific)
Natural Substrates/ Products (Substrates) (protein specific)
Organic Solvent Stability (protein specific)
Oxidation Stability (protein specific)
Posttranslational Modification (protein specific)
Purification (Commentary) (protein specific)
Renatured (Commentary) (protein specific)
Source Tissue (protein specific)
Specific Activity [micromol/min/mg] (protein specific)
Storage Stability (protein specific)
Substrates and Products (Substrate) (protein specific)
Subunits (protein specific)
Temperature Optimum [C] (protein specific)
Temperature Range [C] (protein specific)
Temperature Stability [C] (protein specific)
Turnover Number [1/s] (protein specific)
pH Optimum (protein specific)
pH Range (protein specific)
pH Stability (protein specific)
pI Value (protein specific)
Expression
General Information
General Information (protein specific)
Expression (protein specific)
KCat/KM [mM/s]
KCat/KM [mM/s] (protein specific)
745335
Mailu
Plasmodium apicoplast Gln-tRN ...
Plasmodium berghei, Plasmodium berghei ANKA, Plasmodium falciparum
J. Biol. Chem.
290
29629-29641
2015
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745612
Dewage
Computational analysis of amm ...
Staphylococcus aureus, Staphylococcus aureus ATCC 700699
J. Phys. Chem. B
119
3669-3677
2015
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743955
Chongdar
Preliminary X-ray crystallogr ...
Escherichia coli
Acta Crystallogr. Sect. F
70
922-927
2014
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744268
Echevarria
Glutamyl-tRNAGln amidotransfe ...
Mus musculus
Biochem. J.
460
91-101
2014
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745552
Hadd
Coevolution of specificity de ...
Saccharomyces cerevisiae
J. Mol. Biol.
426
3619-3633
2014
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728154
Grant
The structure of yeast glutami ...
Thermotoga maritima
J. Mol. Biol.
425
2480-2493
2013
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728391
Huot
Gln-tRNAGln synthesis in a dyn ...
Helicobacter pylori
Nucleic Acids Res.
39
9306-9315
2011
1
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728668
O'Donoghue
Rational design of an evolutio ...
Methanothermobacter thermautotrophicus
Proc. Natl. Acad. Sci. USA
108
20485-20490
2011
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1
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1
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4
4
709508
Chatani
A simple turbidimetric method ...
Staphylococcus aureus
J. Microbiol. Methods
80
117-122
2010
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714451
Balg
Inhibition of Helicobacter pyl ...
Helicobacter pylori
Bioorg. Med. Chem.
18
7868-7872
2010
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7
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716331
Ito
Two enzymes bound to one trans ...
Thermotoga maritima
Nature
467
612-616
2010
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716371
Rampias
The archaeal transamidosome fo ...
Methanothermobacter thermautotrophicus
Nucleic Acids Res.
38
5774-5783
2010
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3
3
706514
Nagao
Biogenesis of glutaminyl-mt tR ...
Homo sapiens
Proc. Natl. Acad. Sci. USA
106
16209-16214
2009
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692759
Balg
Inhibition of Helicobacter pyl ...
Helicobacter pylori
J. Am. Chem. Soc.
130
3264-3265
2008
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8
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673689
Namgoong
Co-evolution of the archaeal t ...
Methanothermobacter thermautotrophicus
FEBS Lett.
581
309-314
2007
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674787
Sheppard
The Helicobacter pylori amidot ...
Helicobacter pylori
J. Biol. Chem.
282
11866-11873
2007
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9
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662450
Feng
Gln-tRNAGln formation from Glu ...
Methanothermobacter thermautotrophicus
J. Biol. Chem.
280
8150-8155
2005
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492304
Harpel
Mutagenesis and mechanism-base ...
Streptococcus pyogenes
Biochemistry
41
6398-6407
2002
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492305
Kwak
Expression, purification, and ...
Geobacillus stearothermophilus
Mol. Cells
14
374-381
2002
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492302
Horiuchi
Mechanistic studies of reactio ...
Streptococcus pyogenes
Biochemistry
40
6450-6457
2001
1
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492308
Salazar
A dual-specific Glu-tRNA(Gln) ...
Acidithiobacillus ferrooxidans
FEBS Lett.
500
129-131
2001
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492303
Curnow
Glu-tRNAGln amidotransferase: ...
Bacillus subtilis
Proc. Natl. Acad. Sci. USA
94
11819-11826
1997
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492291
Vothknecht
-
Charging of both, plastidial t ...
Tetradesmus obliquus
Z. Naturforsch. C
50
789-795
1995
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492306
Jahn
Purification and functional ch ...
Chlamydomonas reinhardtii
J. Biol. Chem.
265
8059-8064
1990
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492310
Strauch
Characterization of the glutam ...
Bacillus subtilis
J. Bacteriol.
170
916-920
1988
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2
2
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492307
Zalkin
Glu-tRNAGln amidotransferase ...
Bacillus subtilis
Methods Enzymol.
113
303-305
1985
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