BRENDA - Enzyme Database
show all sequences of 6.3.4.6

Urea amidolyase. I. Properties of the enzyme from Candida utilis

Roon, R.J.; Levenberg, B.; J. Biol. Chem. 247, 4107-4113 (1972)

Data extracted from this reference:

Inhibitors
Inhibitors
Commentary
Organism
Structure
ADP
-
Cyberlindnera jadinii
Avidin
-
Saccharomyces cerevisiae
Avidin
-
Chlamydomonas reinhardtii
Avidin
-
Cyberlindnera jadinii
BaCl2
-
Cyberlindnera jadinii
CaCl2
-
Cyberlindnera jadinii
CoCl2
-
Cyberlindnera jadinii
F-
-
Cyberlindnera jadinii
HgCl2
-
Cyberlindnera jadinii
iodoacetate
-
Cyberlindnera jadinii
PCMB
-
Cyberlindnera jadinii
KM Value [mM]
KM Value [mM]
KM Value Maximum [mM]
Substrate
Commentary
Organism
Structure
0.1
-
Urea
-
Cyberlindnera jadinii
0.1
-
Urea
-
Saccharomyces cerevisiae
0.25
-
ATP
-
Cyberlindnera jadinii
0.5
-
HCO3-
-
Cyberlindnera jadinii
Metals/Ions
Metals/Ions
Commentary
Organism
Structure
Cs+
monovalent cation required, K+, Rb+, Cs+, or NH4+
Cyberlindnera jadinii
K+
monovalent cation required, K+, Rb+, Cs+ or NH4+
Cyberlindnera jadinii
Mg2+
divalent cation required, Mg2+ or Mn2+, maximal activity at 8 mM
Cyberlindnera jadinii
Mn2+
divalent cation required, Mg2+ or Mn2+, maximal activity at 2 mM, much less effective than Mg2+ at the optimal level
Cyberlindnera jadinii
NH4+
monovalent cation required, K+, Rb+, Cs+, or NH4+
Cyberlindnera jadinii
Rb+
monovalent cation required, K+, Rb+, Cs+, or NH4+
Cyberlindnera jadinii
Organism
Organism
Primary Accession No. (UniProt)
Commentary
Textmining
Auxenochlorella pyrenoidosa
-
grown on urea as sole nitogen source
-
Chlamydomonas reinhardtii
-
grown on urea as sole nitrogen source
-
Cyberlindnera jadinii
-
; inducible enzyme
-
Debaryomyces subglobosus
-
grown on urea as sole nitrogen source
-
Pseudochlorella pringsheimii
-
grown on urea as sole nitogen source
-
Saccharomyces cerevisiae
-
grown on urea as sole nitrogen source
-
Substrates and Products (Substrate)
Substrates
Commentary Substrates
Literature (Substrates)
Organism
Products
Commentary (Products)
Literature (Products)
Organism (Products)
Reversibility
ATP + acetamide + HCO3-
-
1601
Cyberlindnera jadinii
?
-
-
-
-
ATP + acetamide + HCO3-
-
1601
Saccharomyces cerevisiae
?
-
-
-
-
ATP + cyanamide + HCO3-
-
1601
Cyberlindnera jadinii
?
-
-
-
-
ATP + formamide + HCO3-
-
1601
Cyberlindnera jadinii
?
-
-
-
-
ATP + formamide + HCO3-
-
1601
Saccharomyces cerevisiae
?
-
-
-
-
ATP + hydroxyurea + HCO3-
-
1601
Cyberlindnera jadinii
?
-
-
-
-
ATP + hydroxyurea + HCO3-
-
1601
Saccharomyces cerevisiae
?
-
-
-
-
ATP + imidodicarbonic acid diamide + HCO3-
iminodicarbonic acid diamide, i.e. biuret
1601
Cyberlindnera jadinii
?
-
-
-
-
ATP + N-methylurea + HCO3-
-
1601
Cyberlindnera jadinii
?
-
-
-
-
ATP + N-methylurea + HCO3-
-
1601
Saccharomyces cerevisiae
?
-
-
-
-
ATP + propionamide + HCO3-
-
1601
Cyberlindnera jadinii
?
-
-
-
-
ATP + urea + HCO3-
-
1601
Chlamydomonas reinhardtii
ADP + phosphate + NH3 + HCO3-
-
1601
Chlamydomonas reinhardtii
-
ATP + urea + HCO3-
-
1601
Cyberlindnera jadinii
ADP + phosphate + NH3 + HCO3-
-
1601
Cyberlindnera jadinii
-
ATP + urea + HCO3-
-
1601
Saccharomyces cerevisiae
ADP + phosphate + NH3 + HCO3-
-
1601
Saccharomyces cerevisiae
-
ATP + urea + HCO3-
-
1601
Pseudochlorella pringsheimii
ADP + phosphate + NH3 + HCO3-
-
1601
Pseudochlorella pringsheimii
-
ATP + urea + HCO3-
-
1601
Auxenochlorella pyrenoidosa
ADP + phosphate + NH3 + HCO3-
-
1601
Auxenochlorella pyrenoidosa
-
ATP + urea + HCO3-
-
1601
Debaryomyces subglobosus
ADP + phosphate + NH3 + HCO3-
-
1601
Debaryomyces subglobosus
-
Temperature Stability [°C]
Temperature Stability Minimum [°C]
Temperature Stability Maximum [°C]
Commentary
Organism
30
-
stable for short periods of time
Cyberlindnera jadinii
45
-
10 min, 50% loss of activity
Cyberlindnera jadinii
55
-
10 min, complete denaturation
Cyberlindnera jadinii
pH Optimum
pH Optimum Minimum
pH Optimum Maximum
Commentary
Organism
7.8
7.9
-
Cyberlindnera jadinii
pH Range
pH Minimum
pH Maximum
Commentary
Organism
7.3
8.7
about 50% of maximal activity at pH 7.3 and 8.7
Cyberlindnera jadinii
Inhibitors (protein specific)
Inhibitors
Commentary
Organism
Structure
ADP
-
Cyberlindnera jadinii
Avidin
-
Saccharomyces cerevisiae
Avidin
-
Chlamydomonas reinhardtii
Avidin
-
Cyberlindnera jadinii
BaCl2
-
Cyberlindnera jadinii
CaCl2
-
Cyberlindnera jadinii
CoCl2
-
Cyberlindnera jadinii
F-
-
Cyberlindnera jadinii
HgCl2
-
Cyberlindnera jadinii
iodoacetate
-
Cyberlindnera jadinii
PCMB
-
Cyberlindnera jadinii
KM Value [mM] (protein specific)
KM Value [mM]
KM Value Maximum [mM]
Substrate
Commentary
Organism
Structure
0.1
-
Urea
-
Cyberlindnera jadinii
0.1
-
Urea
-
Saccharomyces cerevisiae
0.25
-
ATP
-
Cyberlindnera jadinii
0.5
-
HCO3-
-
Cyberlindnera jadinii
Metals/Ions (protein specific)
Metals/Ions
Commentary
Organism
Structure
Cs+
monovalent cation required, K+, Rb+, Cs+, or NH4+
Cyberlindnera jadinii
K+
monovalent cation required, K+, Rb+, Cs+ or NH4+
Cyberlindnera jadinii
Mg2+
divalent cation required, Mg2+ or Mn2+, maximal activity at 8 mM
Cyberlindnera jadinii
Mn2+
divalent cation required, Mg2+ or Mn2+, maximal activity at 2 mM, much less effective than Mg2+ at the optimal level
Cyberlindnera jadinii
NH4+
monovalent cation required, K+, Rb+, Cs+, or NH4+
Cyberlindnera jadinii
Rb+
monovalent cation required, K+, Rb+, Cs+, or NH4+
Cyberlindnera jadinii
Substrates and Products (Substrate) (protein specific)
Substrates
Commentary Substrates
Literature (Substrates)
Organism
Products
Commentary (Products)
Literature (Products)
Organism (Products)
Reversibility
ATP + acetamide + HCO3-
-
1601
Cyberlindnera jadinii
?
-
-
-
-
ATP + acetamide + HCO3-
-
1601
Saccharomyces cerevisiae
?
-
-
-
-
ATP + cyanamide + HCO3-
-
1601
Cyberlindnera jadinii
?
-
-
-
-
ATP + formamide + HCO3-
-
1601
Cyberlindnera jadinii
?
-
-
-
-
ATP + formamide + HCO3-
-
1601
Saccharomyces cerevisiae
?
-
-
-
-
ATP + hydroxyurea + HCO3-
-
1601
Cyberlindnera jadinii
?
-
-
-
-
ATP + hydroxyurea + HCO3-
-
1601
Saccharomyces cerevisiae
?
-
-
-
-
ATP + imidodicarbonic acid diamide + HCO3-
iminodicarbonic acid diamide, i.e. biuret
1601
Cyberlindnera jadinii
?
-
-
-
-
ATP + N-methylurea + HCO3-
-
1601
Cyberlindnera jadinii
?
-
-
-
-
ATP + N-methylurea + HCO3-
-
1601
Saccharomyces cerevisiae
?
-
-
-
-
ATP + propionamide + HCO3-
-
1601
Cyberlindnera jadinii
?
-
-
-
-
ATP + urea + HCO3-
-
1601
Chlamydomonas reinhardtii
ADP + phosphate + NH3 + HCO3-
-
1601
Chlamydomonas reinhardtii
-
ATP + urea + HCO3-
-
1601
Cyberlindnera jadinii
ADP + phosphate + NH3 + HCO3-
-
1601
Cyberlindnera jadinii
-
ATP + urea + HCO3-
-
1601
Saccharomyces cerevisiae
ADP + phosphate + NH3 + HCO3-
-
1601
Saccharomyces cerevisiae
-
ATP + urea + HCO3-
-
1601
Pseudochlorella pringsheimii
ADP + phosphate + NH3 + HCO3-
-
1601
Pseudochlorella pringsheimii
-
ATP + urea + HCO3-
-
1601
Auxenochlorella pyrenoidosa
ADP + phosphate + NH3 + HCO3-
-
1601
Auxenochlorella pyrenoidosa
-
ATP + urea + HCO3-
-
1601
Debaryomyces subglobosus
ADP + phosphate + NH3 + HCO3-
-
1601
Debaryomyces subglobosus
-
Temperature Stability [°C] (protein specific)
Temperature Stability Minimum [°C]
Temperature Stability Maximum [°C]
Commentary
Organism
30
-
stable for short periods of time
Cyberlindnera jadinii
45
-
10 min, 50% loss of activity
Cyberlindnera jadinii
55
-
10 min, complete denaturation
Cyberlindnera jadinii
pH Optimum (protein specific)
pH Optimum Minimum
pH Optimum Maximum
Commentary
Organism
7.8
7.9
-
Cyberlindnera jadinii
pH Range (protein specific)
pH Minimum
pH Maximum
Commentary
Organism
7.3
8.7
about 50% of maximal activity at pH 7.3 and 8.7
Cyberlindnera jadinii
Other publictions for EC 6.3.4.6
No.
1st author
Pub Med
title
organims
journal
volume
pages
year
Activating Compound
Application
Cloned(Commentary)
Crystallization (Commentary)
Engineering
General Stability
Inhibitors
KM Value [mM]
Localization
Metals/Ions
Molecular Weight [Da]
Natural Substrates/ Products (Substrates)
Organic Solvent Stability
Organism
Oxidation Stability
Posttranslational Modification
Purification (Commentary)
Reaction
Renatured (Commentary)
Source Tissue
Specific Activity [micromol/min/mg]
Storage Stability
Substrates and Products (Substrate)
Subunits
Temperature Optimum [°C]
Temperature Range [°C]
Temperature Stability [°C]
Turnover Number [1/s]
pH Optimum
pH Range
pH Stability
Cofactor
Ki Value [mM]
pI Value
IC50 Value
Activating Compound (protein specific)
Application (protein specific)
Cloned(Commentary) (protein specific)
Cofactor (protein specific)
Crystallization (Commentary) (protein specific)
Engineering (protein specific)
General Stability (protein specific)
IC50 Value (protein specific)
Inhibitors (protein specific)
Ki Value [mM] (protein specific)
KM Value [mM] (protein specific)
Localization (protein specific)
Metals/Ions (protein specific)
Molecular Weight [Da] (protein specific)
Natural Substrates/ Products (Substrates) (protein specific)
Organic Solvent Stability (protein specific)
Oxidation Stability (protein specific)
Posttranslational Modification (protein specific)
Purification (Commentary) (protein specific)
Renatured (Commentary) (protein specific)
Source Tissue (protein specific)
Specific Activity [micromol/min/mg] (protein specific)
Storage Stability (protein specific)
Substrates and Products (Substrate) (protein specific)
Subunits (protein specific)
Temperature Optimum [°C] (protein specific)
Temperature Range [°C] (protein specific)
Temperature Stability [°C] (protein specific)
Turnover Number [1/s] (protein specific)
pH Optimum (protein specific)
pH Range (protein specific)
pH Stability (protein specific)
pI Value (protein specific)
Expression
General Information
General Information (protein specific)
Expression (protein specific)
KCat/KM [mM/s]
KCat/KM [mM/s] (protein specific)
744532
Zhao
Structure and function of ure ...
Kluyveromyces lactis, Kluyveromyces lactis DSM 70799
Biosci. Rep.
38
pii: BSR20171617
2018
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1
1
3
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6
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1
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4
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2
2
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6
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1
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1
3
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6
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1
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2
2
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6
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6
6
746393
Lin
The urea carboxylase and allo ...
Pseudomonas syringae pv. tomato, Pseudomonas syringae pv. tomato ATCC BAA-871
Protein Sci.
25
1812-1824
2016
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4
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1
1
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-
727941
Fan
Crystal structure of urea carb ...
Kluyveromyces lactis, Kluyveromyces lactis ATCC 8585
J. Biol. Chem.
287
9389-9398
2012
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1
1
6
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7
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2
2
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6
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1
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2
1
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7
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2
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1
2
1
6
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7
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2
2
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1
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2
1
-
-
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7
-
-
-
-
-
-
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7
7
716145
Navarathna
Dur3 is the major urea transpo ...
Candida albicans
Microbiology
157
270-279
2011
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4
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1
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1
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727251
Strope
Molecular evolution of urea am ...
Aspergillus fumigatus, Aspergillus nidulans, Aspergillus terreus, Bipolaris maydis, Cryptococcus neoformans, Fusarium oxysporum, Fusarium verticillioides, Nectria haematococca, Nitrosomonas europaea, Parastagonospora nodorum, Sorangium cellulosum
BMC Evol. Biol.
11
80
2011
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11
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24
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11
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11
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11
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11
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11
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708524
Navarathna
Evolutionary aspects of urea u ...
Aspergillus fumigatus, Aspergillus nidulans, Candida albicans, Candida glabrata, Clavispora lusitaniae, Eremothecium gossypii, Fusarium graminearum, Kluyveromyces lactis, Magnaporthe grisea, Parastagonospora nodorum, Saccharomyces cerevisiae
FEMS Yeast Res.
10
209-213
2010
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1
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14
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1
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1
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662011
Kanamori
Enzymatic characterization of ...
Oleomonas sagaranensis
J. Bacteriol.
186
2532-2539
2004
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1
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3
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3
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1
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5
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1
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1
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3
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3
1
1
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1
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3
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3
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1
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1
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1
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3
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3
1
1
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656365
Kimura
New enzymatic assay for serum ...
Saccharomyces cerevisiae
J. Clin. Lab. Anal.
17
52-56
2003
1
1
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1
1
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4
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2
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1
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1
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2
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1
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1
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1
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1
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1
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1
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1
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1611
Kimura
New enzymatic assay with urea ...
Saccharomyces cerevisiae
Ann. Clin. Biochem.
34
384-388
1997
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1612
Genbauffe
The urea amidolyase (DUR1,2) g ...
Saccharomyces cerevisiae
DNA Seq.
2
19-32
1991
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1609
Sumrada
Urea carboxylase and allophana ...
Saccharomyces cerevisiae
J. Biol. Chem.
257
9119-9127
1982
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1610
Rees
-
The role of nickel in urea ass ...
Chlorella fusca
Planta
156
386-387
1982
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1607
Waheed
Purification and properties of ...
Cyberlindnera jadinii
J. Biol. Chem.
252
1628-1632
1977
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1
2
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1
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1
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1
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1
1
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1
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1
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1608
Metz
Anabole und katabole Enzyme de ...
Meyerozyma guilliermondii
Z. Allg. Mikrobiol.
17
599-610
1977
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1
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1
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3
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1
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1
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1
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1
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1606
Castric
Urea amidolyase of Candida uti ...
Cyberlindnera jadinii
Biochim. Biophys. Acta
438
574-583
1976
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5
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1
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2
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1
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2
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1
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1
1
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5
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1
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1
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2
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1
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1
1
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1604
Whitney
Urea carboxylase from Saccharo ...
Saccharomyces cerevisiae
J. Biol. Chem.
248
325-330
1973
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1
1
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2
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9
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1
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9
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1605
Leftley
-
Urease and ATP: urea amidolyas ...
Ankistrodesmus braunii, Asterococcus superbus, Chlamydomonas reinhardtii, Chlorophyceae, Dunaliella primolecta, Marvania coccoides, Nannochloris bacillaris, Scenedesmus basiliensis, Tetradesmus obliquus
J. Gen. Microbiol.
77
109-115
1973
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9
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9
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9
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9
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9
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1613
Jones
-
Urease and urea amidolyase det ...
no activity in Marchantia polymorpha
Phytochemistry
12
1675-1676
1973
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1
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1600
Whitney
Urea carboxylase and allophana ...
Saccharomyces cerevisiae
J. Biol. Chem.
247
1349-1353
1972
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3
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1
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1
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1601
Roon
Urea amidolyase. I. Properties ...
Auxenochlorella pyrenoidosa, Chlamydomonas reinhardtii, Cyberlindnera jadinii, Debaryomyces subglobosus, Pseudochlorella pringsheimii, Saccharomyces cerevisiae
J. Biol. Chem.
247
4107-4113
1972
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11
4
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6
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8
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17
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3
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1
1
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11
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4
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6
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17
-
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3
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1
1
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1602
Whitney
Urea carboxylase and allophana ...
Saccharomyces cerevisiae
Biochem. Biophys. Res. Commun.
49
45-51
1972
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2
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2
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1
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1
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1
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2
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1
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1
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1
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1603
Roon
Urea amidolyase. The involveme ...
Cyberlindnera jadinii, Saccharomyces cerevisiae
J. Biol. Chem.
247
7539-7545
1972
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2
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2
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1
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2
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1
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2
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1599
Roon
An adenosine triphosphate-depe ...
Auxenochlorella pyrenoidosa, Cyberlindnera jadinii, Pseudochlorella pringsheimii
J. Biol. Chem.
243
5213-5215
1968
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4
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