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Literature summary for 6.1.1.12 extracted from

  • Messmer, M.; Blais, S.P.; Balg, C.; Chenevert, R.; Grenier, L.; Laguee, P.; Sauter, C.; Sissler, M.; Giege, R.; Lapointe, J.; Florentz, C.
    Peculiar inhibition of human mitochondrial aspartyl-tRNA synthetase by adenylate analogs (2009), Biochimie, 91, 596-603.
    View publication on PubMed

Application

Application Comment Organism
medicine the adaption of pathogens to antibiotics calls for new target macromolecules and new types of inhibitors Escherichia coli
medicine the adaption of pathogens to antibiotics calls for new target macromolecules and new types of inhibitors Homo sapiens
medicine the adaption of pathogens to antibiotics calls for new target macromolecules and new types of inhibitors Bos taurus
medicine the adaption of pathogens to antibiotics calls for new target macromolecules and new types of inhibitors Pseudomonas aeruginosa

Inhibitors

Inhibitors Comment Organism Structure
5'-O-[N-(L-aspartyl)sulfamoyl]adenosine ASP-AMS Bos taurus
5'-O-[N-(L-aspartyl)sulfamoyl]adenosine ASP-AMS Escherichia coli
5'-O-[N-(L-aspartyl)sulfamoyl]adenosine ASP-AMS Homo sapiens
5'-O-[N-(L-aspartyl)sulfamoyl]adenosine ASP-AMS Pseudomonas aeruginosa
L-aspartol-adenylate aspartol-AMP Bos taurus
L-aspartol-adenylate aspartol-AMP Escherichia coli
L-aspartol-adenylate aspartol-AMP Homo sapiens
L-aspartol-adenylate aspartol-AMP Pseudomonas aeruginosa

KM Value [mM]

KM Value [mM] KM Value Maximum [mM] Substrate Comment Organism Structure
0.0015
-
L-aspartate
-
Homo sapiens
0.024
-
L-aspartate
-
Homo sapiens
0.037
-
L-aspartate
-
Bos taurus
0.09
-
L-aspartate
-
Escherichia coli
0.1
-
L-aspartate
-
Pseudomonas aeruginosa

Localization

Localization Comment Organism GeneOntology No. Textmining
cytoplasm
-
Homo sapiens 5737
-
cytoplasm
-
Bos taurus 5737
-
mitochondrion
-
Homo sapiens 5739
-

Natural Substrates/ Products (Substrates)

Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
ATP + L-aspartate + tRNAAsp Escherichia coli
-
AMP + diphosphate + L-aspartyl-tRNAAsp
-
?
ATP + L-aspartate + tRNAAsp Homo sapiens
-
AMP + diphosphate + L-aspartyl-tRNAAsp
-
?
ATP + L-aspartate + tRNAAsp Bos taurus
-
AMP + diphosphate + L-aspartyl-tRNAAsp
-
?
ATP + L-aspartate + tRNAAsp Pseudomonas aeruginosa
-
AMP + diphosphate + L-aspartyl-tRNAAsp
-
?

Organism

Organism UniProt Comment Textmining
Bos taurus
-
-
-
Escherichia coli
-
-
-
Homo sapiens
-
-
-
Pseudomonas aeruginosa
-
-
-

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
ATP + L-aspartate + tRNAAsp
-
Escherichia coli AMP + diphosphate + L-aspartyl-tRNAAsp
-
?
ATP + L-aspartate + tRNAAsp
-
Homo sapiens AMP + diphosphate + L-aspartyl-tRNAAsp
-
?
ATP + L-aspartate + tRNAAsp
-
Bos taurus AMP + diphosphate + L-aspartyl-tRNAAsp
-
?
ATP + L-aspartate + tRNAAsp
-
Pseudomonas aeruginosa AMP + diphosphate + L-aspartyl-tRNAAsp
-
?

Synonyms

Synonyms Comment Organism
Aspartyl-tRNA synthetase
-
Escherichia coli
Aspartyl-tRNA synthetase
-
Homo sapiens
Aspartyl-tRNA synthetase
-
Bos taurus
Aspartyl-tRNA synthetase
-
Pseudomonas aeruginosa
Bt cyt-AspRS
-
Bos taurus
cytoplasmic aspartyl-tRNA synthetase
-
Homo sapiens
cytoplasmic aspartyl-tRNA synthetase
-
Bos taurus
Ec AspRS
-
Escherichia coli
HS cyt-AspRS
-
Homo sapiens
Hs mt-AspRS
-
Homo sapiens
mitochondrial aspartyl-tRNA synthetase
-
Homo sapiens
Pa AspRS
-
Pseudomonas aeruginosa

Temperature Optimum [°C]

Temperature Optimum [°C] Temperature Optimum Maximum [°C] Comment Organism
37
-
aspartylation and inhibition assay Escherichia coli
37
-
aspartylation and inhibition assay Homo sapiens
37
-
aspartylation and inhibition assay Bos taurus
37
-
aspartylation and inhibition assay Pseudomonas aeruginosa

pH Optimum

pH Optimum Minimum pH Optimum Maximum Comment Organism
7.5
-
aspartylation and inhibition assay Escherichia coli
7.5
-
aspartylation and inhibition assay Homo sapiens
7.5
-
aspartylation and inhibition assay Bos taurus
7.5
-
aspartylation and inhibition assay Pseudomonas aeruginosa

Cofactor

Cofactor Comment Organism Structure
ATP
-
Escherichia coli
ATP
-
Homo sapiens
ATP
-
Bos taurus
ATP
-
Pseudomonas aeruginosa

Ki Value [mM]

Ki Value [mM] Ki Value maximum [mM] Inhibitor Comment Organism Structure
0.0000098
-
5'-O-[N-(L-aspartyl)sulfamoyl]adenosine
-
Homo sapiens
0.000015
-
5'-O-[N-(L-aspartyl)sulfamoyl]adenosine
-
Escherichia coli
0.00028
-
5'-O-[N-(L-aspartyl)sulfamoyl]adenosine
-
Bos taurus
0.00039
-
5'-O-[N-(L-aspartyl)sulfamoyl]adenosine
-
Homo sapiens
0.0046
-
L-aspartol-adenylate
-
Homo sapiens
0.01
-
L-aspartol-adenylate
-
Homo sapiens
0.027
-
L-aspartol-adenylate
-
Bos taurus
0.041
-
L-aspartol-adenylate
-
Pseudomonas aeruginosa
0.045
-
L-aspartol-adenylate
-
Escherichia coli