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Literature summary for 4.3.99.3 extracted from

  • Bruender, N.A.; Grell, T.A.; Dowling, D.P.; McCarty, R.M.; Drennan, C.L.; Bandarian, V.
    7-Carboxy-7-deazaguanine synthase a radical S-adenosyl-L-methionine enzyme with polar tendencies (2017), J. Am. Chem. Soc., 139, 1912-1920 .
    View publication on PubMedView publication on EuropePMC

Crystallization (Commentary)

Crystallization (Comment) Organism
X-ray crystal structure of dimeric His6 tagged enzyme is determined to 2.55 A resolution by Multiwavelength Anomalous Dispersion Bacillus subtilis

Metals/Ions

Metals/Ions Comment Organism Structure
Mg2+ Mg2+ provides key contacts with the substrate 6-carboxy-5,6,7,8-tetrahydropterin and the product 7-carboxy-7-carbaguanine, thus anchoring the molecules in the active site. The formation of either 6-carboxypterin product is not enhanced by the presence of Mg2+ Bacillus subtilis

Natural Substrates/ Products (Substrates)

Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
6-carboxy-5,6,7,8-tetrahydropterin Bacillus subtilis the enzyme catalyzes a key step in the biosynthesis of 7-deazapurine containing natural products 7-carboxy-7-carbaguanine + NH3
-
?
6-carboxy-5,6,7,8-tetrahydropterin Bacillus subtilis 168 the enzyme catalyzes a key step in the biosynthesis of 7-deazapurine containing natural products 7-carboxy-7-carbaguanine + NH3
-
?

Organism

Organism UniProt Comment Textmining
Bacillus subtilis O31677
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-
Bacillus subtilis 168 O31677
-
-

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
6-carboxy-5,6,7,8-tetrahydropterin
-
Bacillus subtilis 7-carboxy-7-carbaguanine + NH3
-
?
6-carboxy-5,6,7,8-tetrahydropterin the enzyme catalyzes a key step in the biosynthesis of 7-deazapurine containing natural products Bacillus subtilis 7-carboxy-7-carbaguanine + NH3
-
?
6-carboxy-5,6,7,8-tetrahydropterin
-
Bacillus subtilis 168 7-carboxy-7-carbaguanine + NH3
-
?
6-carboxy-5,6,7,8-tetrahydropterin the enzyme catalyzes a key step in the biosynthesis of 7-deazapurine containing natural products Bacillus subtilis 168 7-carboxy-7-carbaguanine + NH3
-
?
6-carboxypterin under reducing conditions that would promote the reductive cleavage of S-adenosyl-L-methionine, 6-carboxypterin is turned over to 6-deoxyadenosylpterin, presumably by radical addition of the 5'-deoxyadenosine followed by oxidative decarboxylation to the product. In the absence of the strong reductant, dithionite, the carboxylate of 6-carboxypterin is esterified to generate 6-carboxypterin-5'-deoxyadenosyl ester Bacillus subtilis ?
-
?
6-carboxypterin under reducing conditions that would promote the reductive cleavage of S-adenosyl-L-methionine, 6-carboxypterin is turned over to 6-deoxyadenosylpterin, presumably by radical addition of the 5'-deoxyadenosine followed by oxidative decarboxylation to the product. In the absence of the strong reductant, dithionite, the carboxylate of 6-carboxypterin is esterified to generate 6-carboxypterin-5'-deoxyadenosyl ester Bacillus subtilis 168 ?
-
?

Synonyms

Synonyms Comment Organism
CDG synthase
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Bacillus subtilis
queE
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Bacillus subtilis

Cofactor

Cofactor Comment Organism Structure
4Fe-4S-center S-adenosyl-L-methionine binds to the unique iron atom of a site-differentiated [4Fe-4S] cluster and is reductively cleaved to generate a 5'-deoxyadenosyl radical, which initiates turnover Bacillus subtilis
S-adenosyl-L-methionine S-adenosyl-L-methionine-dependent radical enzyme Bacillus subtilis

General Information

General Information Comment Organism
metabolism the enzyme catalyzes a key step in the biosynthesis of 7-deazapurine containing natural products Bacillus subtilis