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Literature summary for 4.2.99.18 extracted from

  • Ishchenko, A.A.; Sanz, G.; Privezentzev, C.V.; Maksimenko, A.V.; Saparbaev, M.
    Characterisation of new substrate specificities of Escherichia coli and Saccharomyces cerevisiae AP endonucleases (2003), Nucleic Acids Res., 31, 6344-6353.
    View publication on PubMedView publication on EuropePMC

KM Value [mM]

KM Value [mM] KM Value Maximum [mM] Substrate Comment Organism Structure
0.0000009
-
DNA containing tetrahydrofuranyl/G pH 7.5, 37°C Saccharomyces cerevisiae
0.0000013
-
DNA containing tetrahydrofuranyl/G pH 7.5, 37°C Escherichia coli
0.000023
-
DNA containing 5,6-dihydrothymidine/A pH 7.5, 37°C Saccharomyces cerevisiae
0.000026
-
DNA containing 5-hydroxy-2'-deoxyuridine/G pH 7.5, 37°C Saccharomyces cerevisiae
0.000038
-
DNA containing 5,6-dihydrothymidine/A pH 7.5, 37°C Escherichia coli
0.00005
-
DNA containing 2,6-diamino-4-hydroxy-5-N-methylformamidopyrimidine/C pH 7.5, 37°C Saccharomyces cerevisiae
0.000103
-
DNA containing dihydrouridine/G pH 7.5, 37°C Saccharomyces cerevisiae
0.00025
-
DNA with 2,6-diamino-4-hydroxy-5-N-methylformamidopyrimidine/C pH 7.5, 37°C Escherichia coli
0.000316
-
DNA containing 5-hydroxy-2'-deoxyuridine/G pH 7.5, 37°C Escherichia coli

Natural Substrates/ Products (Substrates)

Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
DNA Escherichia coli
-
fragments of DNA
-
?
DNA Saccharomyces cerevisiae
-
fragments of DNA
-
?

Organism

Organism UniProt Comment Textmining
Escherichia coli
-
-
-
Saccharomyces cerevisiae
-
-
-

Purification (Commentary)

Purification (Comment) Organism
-
Escherichia coli
-
Saccharomyces cerevisiae

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
DNA
-
Escherichia coli fragments of DNA
-
?
DNA
-
Saccharomyces cerevisiae fragments of DNA
-
?
DNA DNA containing dihydrouridine, 5,3-dihydrothymidine, 5-hydroxy-2'-deoxyuridine, 2,6-diamino-4-hydroxy-5-N-methylformamidopyrimidine or tetrahydrofuranyl Escherichia coli fragments of DNA
-
?
DNA DNA containing dihydrouridine, 5,3-dihydrothymidine, 5-hydroxy-2'-deoxyuridine, 2,6-diamino-4-hydroxy-5-N-methylformamidopyrimidine or tetrahydrofuranyl Saccharomyces cerevisiae fragments of DNA
-
?
DNA containing 2,6-diamino-4-hydroxy-5-N-methylformamidopyrimidine/C
-
Escherichia coli ?
-
?
DNA containing 2,6-diamino-4-hydroxy-5-N-methylformamidopyrimidine/C
-
Saccharomyces cerevisiae ?
-
?
DNA containing 5,6-dihydrothymidine/A
-
Escherichia coli ?
-
?
DNA containing 5,6-dihydrothymidine/A
-
Saccharomyces cerevisiae ?
-
?
DNA containing 5-hydroxy-2'-deoxyuridine/G
-
Escherichia coli ?
-
?
DNA containing 5-hydroxy-2'-deoxyuridine/G
-
Saccharomyces cerevisiae ?
-
?
DNA containing dihydrouridine/G
-
Saccharomyces cerevisiae ?
-
?
DNA containing tetrahydrofuranyl/G
-
Escherichia coli ?
-
?
DNA containing tetrahydrofuranyl/G
-
Saccharomyces cerevisiae ?
-
?
DNA with 2,6-diamino-4-hydroxy-5-N-methylformamidopyrimidine/C
-
Escherichia coli ?
-
?
DNA with 5,6-dihydrothymidine/A
-
Escherichia coli ?
-
?
DNA with 5-hydroxy-2'-deoxyuridine/G
-
Escherichia coli ?
-
?
DNA with dihydrouridine/G
-
Saccharomyces cerevisiae ?
-
?
DNA with tetrahydrofuranyl/G
-
Saccharomyces cerevisiae ?
-
?

Turnover Number [1/s]

Turnover Number Minimum [1/s] Turnover Number Maximum [1/s] Substrate Comment Organism Structure
0.00333
-
DNA containing 5,6-dihydrothymidine/A pH 7.5, 37°C Saccharomyces cerevisiae
0.00417
-
4-hydroxy-5-N-methylformamidopyrimidine/C pH 7.5, 37°C Escherichia coli
0.00567
-
4-hydroxy-5-N-methylformamidopyrimidine/C pH 7.5, 37°C Saccharomyces cerevisiae
0.01
-
DNA containing tetrahydrofuranyl/G pH 7.5, 37°C Saccharomyces cerevisiae
0.0117
-
DNA containing 2,6-diamino-4-hydroxy-5-N-methylformamidopyrimidine/C pH 7.5, 37°C Saccharomyces cerevisiae
0.0158
-
DNA containing 2,6-diamino-4-hydroxy-5-N-methylformamidopyrimidine/C pH 7.5, 37°C Escherichia coli
0.0267
-
DNA containing 5-hydroxy-2'-deoxyuridine/G pH 7.5, 37°C Escherichia coli
0.0283
-
DNA containing tetrahydrofuranyl/G pH 7.5, 37°C Escherichia coli