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Literature summary for 4.2.2.3 extracted from
- Alginate lyase: review of major sources and enzyme characteristics, structure-function analysis, biological roles, and applications (2000), Annu. Rev. Microbiol., 54, 289-340.
Activating Compound
| Activating Compound | Comment | Organism | Structure |
|---|---|---|---|
| alginate | stimulates the expression of extracellular isozyme, but not of the intracellular isozymes | Pseudoalteromonas distincta |  |
| Ca2+ | required | Chlorella virus | |
| Ca2+ | - |
Paradendryphiella arenariae | |
| K+ | - |
Haliotis tuberculata | |
| Mg2+ | - |
Haliotis tuberculata | |
| Mg2+ | - |
Paradendryphiella arenariae | |
| Na+ | - |
Haliotis tuberculata | |
| Na2HPO4 | - |
Paradendryphiella arenariae | |
Application
| Application | Comment | Organism |
|---|---|---|
| biotechnology | use of alginate lyase for engineering of alginate polymers for applications in various industrial, agricultural, and medical fields | Sphingomonas sp. |
| biotechnology | use of alginate lyase for engineering of alginate polymers for applications in various industrial, agricultural, and medical fields | Pseudoalteromonas distincta |
| biotechnology | use of alginate lyase for engineering of alginate polymers for applications in various industrial, agricultural, and medical fields | Pseudomonas aeruginosa |
| biotechnology | use of alginate lyase for engineering of alginate polymers for applications in various industrial, agricultural, and medical fields | Azotobacter vinelandii |
| biotechnology | use of alginate lyase for engineering of alginate polymers for applications in various industrial, agricultural, and medical fields | Pseudomonas syringae |
| biotechnology | use of alginate lyase for engineering of alginate polymers for applications in various industrial, agricultural, and medical fields | Haliotis corrugata |
| biotechnology | use of alginate lyase for engineering of alginate polymers for applications in various industrial, agricultural, and medical fields | Azotobacter chroococcum |
| biotechnology | use of alginate lyase for engineering of alginate polymers for applications in various industrial, agricultural, and medical fields | Stenotrophomonas maltophilia |
| biotechnology | use of alginate lyase for engineering of alginate polymers for applications in various industrial, agricultural, and medical fields | Chlorella virus |
| biotechnology | use of alginate lyase for engineering of alginate polymers for applications in various industrial, agricultural, and medical fields | Laminaria digitata |
| biotechnology | use of alginate lyase for engineering of alginate polymers for applications in various industrial, agricultural, and medical fields | Pelvetia canaliculata |
| biotechnology | use of alginate lyase for engineering of alginate polymers for applications in various industrial, agricultural, and medical fields | Undaria pinnatifida |
| biotechnology | use of alginate lyase for engineering of alginate polymers for applications in various industrial, agricultural, and medical fields | Turbo cornutus |
| biotechnology | use of alginate lyase for engineering of alginate polymers for applications in various industrial, agricultural, and medical fields | Littorina sp. |
| biotechnology | use of alginate lyase for engineering of alginate polymers for applications in various industrial, agricultural, and medical fields | Dollabella auricola |
| biotechnology | use of alginate lyase for engineering of alginate polymers for applications in various industrial, agricultural, and medical fields | Choromytilus meridionalis |
| biotechnology | use of alginate lyase for engineering of alginate polymers for applications in various industrial, agricultural, and medical fields | Perna perna |
| biotechnology | use of alginate lyase for engineering of alginate polymers for applications in various industrial, agricultural, and medical fields | Haliotis tuberculata |
| biotechnology | use of alginate lyase for engineering of alginate polymers for applications in various industrial, agricultural, and medical fields | Spisula solidissima |
| biotechnology | use of alginate lyase for engineering of alginate polymers for applications in various industrial, agricultural, and medical fields | Pseudomonas alginovora |
| biotechnology | use of alginate lyase for engineering of alginate polymers for applications in various industrial, agricultural, and medical fields | Colpomenia sinuosa |
| biotechnology | use of alginate lyase for engineering of alginate polymers for applications in various industrial, agricultural, and medical fields | Eisenia bicyclis |
| biotechnology | use of alginate lyase for engineering of alginate polymers for applications in various industrial, agricultural, and medical fields | Petalonia binghamiae |
| biotechnology | use of alginate lyase for engineering of alginate polymers for applications in various industrial, agricultural, and medical fields | Fucus spp. |
| biotechnology | use of alginate lyase for engineering of alginate polymers for applications in various industrial, agricultural, and medical fields | Ishige sp. |
| biotechnology | use of alginate lyase for engineering of alginate polymers for applications in various industrial, agricultural, and medical fields | Sargassum sagamianum |
| biotechnology | use of alginate lyase for engineering of alginate polymers for applications in various industrial, agricultural, and medical fields | Dictyopteris pacifica |
| biotechnology | use of alginate lyase for engineering of alginate polymers for applications in various industrial, agricultural, and medical fields | Aplysia depilans |
| biotechnology | use of alginate lyase for engineering of alginate polymers for applications in various industrial, agricultural, and medical fields | Alginovibrio aquatilis |
| biotechnology | use of alginate lyase for engineering of alginate polymers for applications in various industrial, agricultural, and medical fields | Photobacterium sp. |
| biotechnology | use of alginate lyase for engineering of alginate polymers for applications in various industrial, agricultural, and medical fields | Cobetia marina |
| biotechnology | use of alginate lyase for engineering of alginate polymers for applications in various industrial, agricultural, and medical fields | Vibrio sinaloensis |
| biotechnology | use of alginate lyase for engineering of alginate polymers for applications in various industrial, agricultural, and medical fields | Vibrio alginolyticus |
| biotechnology | use of alginate lyase for engineering of alginate polymers for applications in various industrial, agricultural, and medical fields | Pseudomonas putida |
| biotechnology | use of alginate lyase for engineering of alginate polymers for applications in various industrial, agricultural, and medical fields | Bacillus sp. (in: firmicutes) |
| biotechnology | use of alginate lyase for engineering of alginate polymers for applications in various industrial, agricultural, and medical fields | Niallia circulans |
| biotechnology | use of alginate lyase for engineering of alginate polymers for applications in various industrial, agricultural, and medical fields | Azotobacter vinelandii phage |
| biotechnology | use of alginate lyase for engineering of alginate polymers for applications in various industrial, agricultural, and medical fields | Azotobacter phage A31 |
| biotechnology | use of alginate lyase for engineering of alginate polymers for applications in various industrial, agricultural, and medical fields | Azotobacter phage A22 |
| biotechnology | use of alginate lyase for engineering of alginate polymers for applications in various industrial, agricultural, and medical fields | Asteromyces cruciatus |
| biotechnology | use of alginate lyase for engineering of alginate polymers for applications in various industrial, agricultural, and medical fields | Corollospora intermedia |
| biotechnology | use of alginate lyase for engineering of alginate polymers for applications in various industrial, agricultural, and medical fields | Paradendryphiella salina |
| biotechnology | use of alginate lyase for engineering of alginate polymers for applications in various industrial, agricultural, and medical fields | Paradendryphiella arenariae |
| medicine | enzyme is a target for design of chemotherapeutics in the treatment of cystis fibrosis caused by infection with alginate producing Pseudomonas aeruginosa | Pseudomonas aeruginosa |
Cloned(Commentary)
| Cloned (Comment) | Organism |
|---|---|
- |
Chlorella virus |
- |
Pseudomonas aeruginosa |
Inhibitors
| Inhibitors | Comment | Organism | Structure |
|---|---|---|---|
| Na+ | at 1% w/v | Paradendryphiella arenariae | |
Localization
| Localization | Comment | Organism | GeneOntology No. | Textmining |
|---|---|---|---|---|
| cell wall | bound | Fucus spp. | 5618 | - |
| cytoplasm | - |
Sphingomonas sp. | 5737 | - |
| extracellular | constitutive expression | Pseudoalteromonas distincta | - |
- |
| extracellular | secretion | Haliotis corrugata | - |
- |
| extracellular | strain 4A1M | Azotobacter chroococcum | - |
- |
| extracellular | secretion | Turbo cornutus | - |
- |
| extracellular | secretion | Littorina sp. | - |
- |
| extracellular | secretion | Dollabella auricola | - |
- |
| extracellular | secretion | Haliotis tuberculata | - |
- |
| extracellular | - |
Alginovibrio aquatilis | - |
- |
| extracellular | - |
Photobacterium sp. | - |
- |
| extracellular | - |
Vibrio sinaloensis | - |
- |
| extracellular | - |
Vibrio alginolyticus | - |
- |
| extracellular | - |
Bacillus sp. (in: firmicutes) | - |
- |
| extracellular | - |
Niallia circulans | - |
- |
| extracellular | - |
Azotobacter vinelandii phage | - |
- |
| extracellular | - |
Azotobacter phage A31 | - |
- |
| extracellular | - |
Azotobacter phage A22 | - |
- |
| extracellular | - |
Corollospora intermedia | - |
- |
| extracellular | - |
Paradendryphiella salina | - |
- |
| extracellular | - |
Paradendryphiella arenariae | - |
- |
| intracellular | constitutive expression, intracellular isozymes also show hydrolase activity on alginate | Pseudoalteromonas distincta | 5622 | - |
| intracellular | recombinant enzyme | Pseudomonas aeruginosa | 5622 | - |
| intracellular | - |
Stenotrophomonas maltophilia | 5622 | - |
| intracellular | - |
Laminaria digitata | 5622 | - |
| intracellular | - |
Pelvetia canaliculata | 5622 | - |
| intracellular | - |
Pseudomonas alginovora | 5622 | - |
| intracellular | - |
Cobetia marina | 5622 | - |
| intracellular | - |
Pseudomonas putida | 5622 | - |
| intracellular | - |
Asteromyces cruciatus | 5622 | - |
| periplasm | - |
Azotobacter vinelandii | - |
- |
| periplasm | - |
Photobacterium sp. | - |
- |
| periplasm | - |
Azotobacter chroococcum | - |
- |
| periplasm | - |
Pseudomonas aeruginosa | - |
- |
Metals/Ions
| Metals/Ions | Comment | Organism | Structure |
|---|---|---|---|
| Ba2+ | activating | Littorina sp. | |
| Ca2+ | at 1 mM, strain 4A1M | Azotobacter chroococcum | |
| Ca2+ | - |
Bacillus sp. (in: firmicutes) | |
| Ca2+ | at 7.5 mM | Littorina sp. | |
| Ca2+ | - |
Niallia circulans | |
| Ca2+ | activating | Paradendryphiella salina | |
| Ca2+ | required | Pelvetia canaliculata | |
| Ca2+ | isozyme SP2 | Turbo cornutus | |
| Ca2+ | cations are required | Undaria pinnatifida | |
| CaCl2 | optimal at 5-10 mM | Vibrio alginolyticus | |
| Co2+ | - |
Bacillus sp. (in: firmicutes) | |
| Co2+ | activating | Littorina sp. | |
| Cs+ | - |
Alginovibrio aquatilis | |
| K+ | - |
Alginovibrio aquatilis | |
| K+ | activating | Azotobacter chroococcum | |
| K+ | cations are required for activity | Haliotis corrugata | |
| K+ | extracellular isozyme | Pseudoalteromonas distincta | |
| Li+ | - |
Alginovibrio aquatilis | |
| Mg2+ | activating | Azotobacter chroococcum | |
| Mg2+ | cations are required for activity | Haliotis corrugata | |
| Mg2+ | activating | Littorina sp. | |
| Mg2+ | - |
Niallia circulans | |
| Mg2+ | activating | Paradendryphiella salina | |
| Mg2+ | extracellular isozyme | Pseudoalteromonas distincta | |
| Mg2+ | - |
Pseudomonas aeruginosa | |
| Mn2+ | - |
Bacillus sp. (in: firmicutes) | |
| Mn2+ | cations are required for activity | Haliotis corrugata | |
| Mn2+ | activating | Paradendryphiella salina | |
| additional information | no requirement for divalent cations | Alginovibrio aquatilis | |
| additional information | no metal ion requirement | Aplysia depilans | |
| additional information | no requirement for divalent cations | Azotobacter vinelandii | |
| Na+ | - |
Alginovibrio aquatilis | |
| Na+ | activating | Azotobacter chroococcum | |
| Na+ | required | Azotobacter vinelandii | |
| Na+ | cations are required for activity | Haliotis corrugata | |
| Na+ | extracellular isozyme | Pseudoalteromonas distincta | |
| Na+ | - |
Pseudomonas aeruginosa | |
| Na+ | - |
Spisula solidissima | |
| Na2HPO4 | optimal at 1% w/v | Paradendryphiella salina | |
| NaCl | 0.05-0.075 M required for activity | Haliotis corrugata | |
| NaCl | 0.1-0.2 M required for activity | Haliotis tuberculata | |
| NaCl | required for activity | Littorina sp. | |
| NaCl | 0.05-0.075 M required for activity | Spisula solidissima | |
| NaCl | 0.05-0.075 M required for activity | Turbo cornutus | |
| NaCl | 0.5 M required | Vibrio sinaloensis | |
| Rb+ | - |
Alginovibrio aquatilis | |
| Zn2+ | activating | Paradendryphiella salina | |
Molecular Weight [Da]
| Molecular Weight [Da] | Molecular Weight Maximum [Da] | Comment | Organism |
|---|---|---|---|
| 23000 | - |
about, strain 4A1M | Azotobacter chroococcum |
| 24000 | - |
- |
Pseudomonas alginovora |
| 25000 | - |
ALY-II | Sphingomonas sp. |
| 29000 | - |
- |
Vibrio sinaloensis |
| 30000 | - |
- |
Photobacterium sp. |
| 30000 | 35000 | - |
Azotobacter vinelandii phage |
| 32000 | - |
extracellular isozyme | Pseudoalteromonas distincta |
| 32000 | - |
both isozymes | Turbo cornutus |
| 34000 | - |
- |
Haliotis tuberculata |
| 35000 | 42000 | - |
Azotobacter phage A31 |
| 38000 | - |
ALY-III | Sphingomonas sp. |
| 39000 | - |
- |
Azotobacter vinelandii |
| 39000 | - |
- |
Chlorella virus |
| 39000 | - |
- |
Cobetia marina |
| 39000 | - |
from strain FRDI | Pseudomonas aeruginosa |
| 39000 | 41000 | - |
Bacillus sp. (in: firmicutes) |
| 40000 | - |
- |
Littorina sp. |
| 43000 | - |
- |
Azotobacter chroococcum |
| 43500 | - |
recombinant enzyme | Pseudomonas aeruginosa |
| 47000 | - |
- |
Vibrio alginolyticus |
| 60000 | - |
ALY-I | Sphingomonas sp. |
| 74000 | - |
- |
Undaria pinnatifida |
| 110000 | - |
- |
Alginovibrio aquatilis |
Natural Substrates/ Products (Substrates)
| Natural Substrates | Organism | Comment (Nat. Sub.) | Natural Products | Comment (Nat. Pro.) | Rev. | Reac. |
|---|---|---|---|---|---|---|
| acetyl-beta1,4-D-mannuronic acid | Azotobacter phage A22 | - |
? | - |
? | |
| alginate | Azotobacter vinelandii | a heteropolymer consisiting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | unsaturated algino-oligosaccharides | - |
? | |
| alginate | Paradendryphiella salina | a heteropolymer consisiting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | unsaturated algino-oligosaccharides | - |
? | |
| alginate | Pseudomonas aeruginosa | a heteropolymer consisiting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | unsaturated algino-oligosaccharides | - |
? | |
| alginate | Haliotis corrugata | a heteropolymer consisiting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | unsaturated algino-oligosaccharides | - |
? | |
| alginate | Petalonia binghamiae | a heteropolymer consisiting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | unsaturated algino-oligosaccharides | - |
? | |
| alginate | Pseudomonas putida | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | unsaturated algino-oligosaccharides | - |
? | |
| alginate | Azotobacter vinelandii | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | unsaturated algino-oligosaccharides | - |
? | |
| alginate | Bacillus sp. (in: firmicutes) | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | unsaturated algino-oligosaccharides | - |
? | |
| alginate | Niallia circulans | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | unsaturated algino-oligosaccharides | - |
? | |
| alginate | Pseudomonas syringae | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | unsaturated algino-oligosaccharides | - |
? | |
| alginate | Spisula solidissima | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | unsaturated algino-oligosaccharides | - |
? | |
| alginate | Azotobacter vinelandii phage | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | unsaturated algino-oligosaccharides | - |
? | |
| alginate | Turbo cornutus | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | unsaturated algino-oligosaccharides | - |
? | |
| alginate | Littorina sp. | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | unsaturated algino-oligosaccharides | - |
? | |
| alginate | Laminaria digitata | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | unsaturated algino-oligosaccharides | - |
? | |
| alginate | Azotobacter chroococcum | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | unsaturated algino-oligosaccharides | - |
? | |
| alginate | Pseudoalteromonas distincta | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | unsaturated algino-oligosaccharides | - |
? | |
| alginate | Sphingomonas sp. | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | unsaturated algino-oligosaccharides | - |
? | |
| alginate | Pseudomonas aeruginosa | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | unsaturated algino-oligosaccharides | - |
? | |
| alginate | Stenotrophomonas maltophilia | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | unsaturated algino-oligosaccharides | - |
? | |
| alginate | Chlorella virus | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | unsaturated algino-oligosaccharides | - |
? | |
| alginate | Pelvetia canaliculata | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | unsaturated algino-oligosaccharides | - |
? | |
| alginate | Undaria pinnatifida | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | unsaturated algino-oligosaccharides | - |
? | |
| alginate | Dollabella auricola | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | unsaturated algino-oligosaccharides | - |
? | |
| alginate | Choromytilus meridionalis | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | unsaturated algino-oligosaccharides | - |
? | |
| alginate | Perna perna | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | unsaturated algino-oligosaccharides | - |
? | |
| alginate | Haliotis tuberculata | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | unsaturated algino-oligosaccharides | - |
? | |
| alginate | Pseudomonas alginovora | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | unsaturated algino-oligosaccharides | - |
? | |
| alginate | Colpomenia sinuosa | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | unsaturated algino-oligosaccharides | - |
? | |
| alginate | Eisenia bicyclis | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | unsaturated algino-oligosaccharides | - |
? | |
| alginate | Fucus spp. | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | unsaturated algino-oligosaccharides | - |
? | |
| alginate | Ishige sp. | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | unsaturated algino-oligosaccharides | - |
? | |
| alginate | Sargassum sagamianum | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | unsaturated algino-oligosaccharides | - |
? | |
| alginate | Dictyopteris pacifica | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | unsaturated algino-oligosaccharides | - |
? | |
| alginate | Aplysia depilans | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | unsaturated algino-oligosaccharides | - |
? | |
| alginate | Alginovibrio aquatilis | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | unsaturated algino-oligosaccharides | - |
? | |
| alginate | Photobacterium sp. | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | unsaturated algino-oligosaccharides | - |
? | |
| alginate | Cobetia marina | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | unsaturated algino-oligosaccharides | - |
? | |
| alginate | Vibrio sinaloensis | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | unsaturated algino-oligosaccharides | - |
? | |
| alginate | Vibrio alginolyticus | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | unsaturated algino-oligosaccharides | - |
? | |
| alginate | Azotobacter phage A31 | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | unsaturated algino-oligosaccharides | - |
? | |
| alginate | Asteromyces cruciatus | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | unsaturated algino-oligosaccharides | - |
? | |
| alginate | Corollospora intermedia | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | unsaturated algino-oligosaccharides | - |
? | |
| alginate | Paradendryphiella arenariae | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | unsaturated algino-oligosaccharides | - |
? | |
| alginate | Azotobacter chroococcum 4A1M | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | unsaturated algino-oligosaccharides | - |
? | |
| alginate | Vibrio sinaloensis Alg-A | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | unsaturated algino-oligosaccharides | - |
? | |
| alginate | Pseudomonas alginovora XO17 | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | unsaturated algino-oligosaccharides | - |
? | |
| additional information | Choromytilus meridionalis | - |
? | - |
? | |
| additional information | Pseudomonas putida | biological function of the enzyme | ? | - |
? | |
| additional information | Azotobacter vinelandii | biological function of the enzyme | ? | - |
? | |
| additional information | Bacillus sp. (in: firmicutes) | biological function of the enzyme | ? | - |
? | |
| additional information | Niallia circulans | biological function of the enzyme | ? | - |
? | |
| additional information | Pseudomonas syringae | biological function of the enzyme | ? | - |
? | |
| additional information | Spisula solidissima | biological function of the enzyme | ? | - |
? | |
| additional information | Azotobacter vinelandii phage | biological function of the enzyme | ? | - |
? | |
| additional information | Turbo cornutus | biological function of the enzyme | ? | - |
? | |
| additional information | Paradendryphiella salina | biological function of the enzyme | ? | - |
? | |
| additional information | Littorina sp. | biological function of the enzyme | ? | - |
? | |
| additional information | Laminaria digitata | biological function of the enzyme | ? | - |
? | |
| additional information | Azotobacter chroococcum | biological function of the enzyme | ? | - |
? | |
| additional information | Pseudoalteromonas distincta | biological function of the enzyme | ? | - |
? | |
| additional information | Sphingomonas sp. | biological function of the enzyme | ? | - |
? | |
| additional information | Stenotrophomonas maltophilia | biological function of the enzyme | ? | - |
? | |
| additional information | Chlorella virus | biological function of the enzyme | ? | - |
? | |
| additional information | Pelvetia canaliculata | biological function of the enzyme | ? | - |
? | |
| additional information | Undaria pinnatifida | biological function of the enzyme | ? | - |
? | |
| additional information | Dollabella auricola | biological function of the enzyme | ? | - |
? | |
| additional information | Perna perna | biological function of the enzyme | ? | - |
? | |
| additional information | Haliotis tuberculata | biological function of the enzyme | ? | - |
? | |
| additional information | Pseudomonas alginovora | biological function of the enzyme | ? | - |
? | |
| additional information | Colpomenia sinuosa | biological function of the enzyme | ? | - |
? | |
| additional information | Eisenia bicyclis | biological function of the enzyme | ? | - |
? | |
| additional information | Petalonia binghamiae | biological function of the enzyme | ? | - |
? | |
| additional information | Fucus spp. | biological function of the enzyme | ? | - |
? | |
| additional information | Ishige sp. | biological function of the enzyme | ? | - |
? | |
| additional information | Sargassum sagamianum | biological function of the enzyme | ? | - |
? | |
| additional information | Dictyopteris pacifica | biological function of the enzyme | ? | - |
? | |
| additional information | Aplysia depilans | biological function of the enzyme | ? | - |
? | |
| additional information | Alginovibrio aquatilis | biological function of the enzyme | ? | - |
? | |
| additional information | Photobacterium sp. | biological function of the enzyme | ? | - |
? | |
| additional information | Cobetia marina | biological function of the enzyme | ? | - |
? | |
| additional information | Vibrio sinaloensis | biological function of the enzyme | ? | - |
? | |
| additional information | Vibrio alginolyticus | biological function of the enzyme | ? | - |
? | |
| additional information | Azotobacter phage A31 | biological function of the enzyme | ? | - |
? | |
| additional information | Azotobacter phage A22 | biological function of the enzyme | ? | - |
? | |
| additional information | Asteromyces cruciatus | biological function of the enzyme | ? | - |
? | |
| additional information | Corollospora intermedia | biological function of the enzyme | ? | - |
? | |
| additional information | Paradendryphiella arenariae | biological function of the enzyme | ? | - |
? | |
| additional information | Pseudomonas aeruginosa | biological function of the enzyme, Pseudomonas aeruginosa produces a bacterial alginate which seems to be necessary for cell attachment to the capsule-like biofilm build in lung of infected humans suffering cystic fibrosis | ? | - |
? | |
| additional information | Azotobacter chroococcum 4A1M | biological function of the enzyme | ? | - |
? | |
| additional information | Vibrio sinaloensis Alg-A | biological function of the enzyme | ? | - |
? | |
| additional information | Pseudomonas alginovora XO17 | biological function of the enzyme | ? | - |
? | |
Organism
| Organism | UniProt | Comment | Textmining |
|---|---|---|---|
| Alginovibrio aquatilis | - |
- |
- |
| Aplysia depilans | - |
- |
- |
| Asteromyces cruciatus | - |
- |
- |
| Azotobacter chroococcum | - |
- |
- |
| Azotobacter chroococcum | O50660 | - |
- |
| Azotobacter chroococcum 4A1M | - |
- |
- |
| Azotobacter phage A22 | - |
- |
- |
| Azotobacter phage A31 | - |
- |
- |
| Azotobacter vinelandii | O52195 | - |
- |
| Azotobacter vinelandii | Q9ZFG9 | bifunctional enzyme, also possesses epimerase activity | - |
| Azotobacter vinelandii phage | - |
- |
- |
| Bacillus sp. (in: firmicutes) | - |
- |
- |
| Bacillus sp. (in: firmicutes) ATB-1015 | - |
- |
- |
| Chlorella virus | Q9QT64 | - |
- |
| Choromytilus meridionalis | - |
marine mussel | - |
| Cobetia marina | Q9ZNB7 | - |
- |
| Colpomenia sinuosa | - |
- |
- |
| Corollospora intermedia | - |
- |
- |
| Dictyopteris pacifica | - |
- |
- |
| Dollabella auricola | - |
- |
- |
| Eisenia bicyclis | - |
- |
- |
| Fucus spp. | - |
- |
- |
| Haliotis corrugata | - |
abalone, alginase I | - |
| Haliotis tuberculata | - |
- |
- |
| Ishige sp. | - |
- |
- |
| Laminaria digitata | - |
brown algae | - |
| Littorina sp. | - |
- |
- |
| Niallia circulans | - |
strain JBH2, strain 1351, groups 3,4,5,8 | - |
| Paradendryphiella arenariae | - |
- |
- |
| Paradendryphiella salina | - |
- |
- |
| Pelvetia canaliculata | - |
brown algae | - |
| Perna perna | - |
marine mussel | - |
| Petalonia binghamiae | - |
- |
- |
| Photobacterium sp. | P39049 | strain ATCC 433367, marine bacterium | - |
| Pseudoalteromonas distincta | Q9Z6D6 | extracellular isozyme; several isozymes with homo- or heterogenous substrate specificities | - |
| Pseudomonas aeruginosa | - |
- |
- |
| Pseudomonas aeruginosa FRDI | - |
- |
- |
| Pseudomonas alginovora | Q59639 | constitutive enzyme expression, recombinant enzyme | - |
| Pseudomonas alginovora XO17 | Q59639 | constitutive enzyme expression, recombinant enzyme | - |
| Pseudomonas putida | - |
- |
- |
| Pseudomonas syringae | - |
- |
- |
| Sargassum sagamianum | - |
- |
- |
| Sphingomonas sp. | - |
isozymes ALY I-III | - |
| Spisula solidissima | - |
- |
- |
| Stenotrophomonas maltophilia | - |
- |
- |
| Turbo cornutus | - |
2 isozymes | - |
| uncultured bacterium | - |
Alg-A | - |
| uncultured bacterium Alg-A | - |
Alg-A | - |
| Undaria pinnatifida | - |
brown algae | - |
| Vibrio alginolyticus | - |
strain ATCC 17749 | - |
| Vibrio sinaloensis | - |
Alg-A | - |
| Vibrio sinaloensis Alg-A | - |
Alg-A | - |
Purification (Commentary)
| Purification (Comment) | Organism |
|---|---|
- |
Azotobacter chroococcum |
- |
Azotobacter vinelandii |
- |
Pseudomonas aeruginosa |
Reaction
| Reaction | Comment | Organism | Reaction ID |
|---|---|---|---|
| Eliminative cleavage of alginate to give oligosaccharides with 4-deoxy-alpha-L-erythro-hex-4-enuronosyl groups at their non-reducing ends and beta-D-mannuronate at their reducing end. | beta-elimination mechanism, substrate binding and catalytic site | Sphingomonas sp. | |
| Eliminative cleavage of alginate to give oligosaccharides with 4-deoxy-alpha-L-erythro-hex-4-enuronosyl groups at their non-reducing ends and beta-D-mannuronate at their reducing end. | beta-elimination mechanism, substrate binding and catalytic site | Pseudoalteromonas distincta | |
| Eliminative cleavage of alginate to give oligosaccharides with 4-deoxy-alpha-L-erythro-hex-4-enuronosyl groups at their non-reducing ends and beta-D-mannuronate at their reducing end. | beta-elimination mechanism, substrate binding and catalytic site | Pseudomonas aeruginosa | |
| Eliminative cleavage of alginate to give oligosaccharides with 4-deoxy-alpha-L-erythro-hex-4-enuronosyl groups at their non-reducing ends and beta-D-mannuronate at their reducing end. | beta-elimination mechanism, substrate binding and catalytic site | Azotobacter vinelandii | |
| Eliminative cleavage of alginate to give oligosaccharides with 4-deoxy-alpha-L-erythro-hex-4-enuronosyl groups at their non-reducing ends and beta-D-mannuronate at their reducing end. | beta-elimination mechanism, substrate binding and catalytic site | Pseudomonas syringae | |
| Eliminative cleavage of alginate to give oligosaccharides with 4-deoxy-alpha-L-erythro-hex-4-enuronosyl groups at their non-reducing ends and beta-D-mannuronate at their reducing end. | beta-elimination mechanism, substrate binding and catalytic site | Haliotis corrugata | |
| Eliminative cleavage of alginate to give oligosaccharides with 4-deoxy-alpha-L-erythro-hex-4-enuronosyl groups at their non-reducing ends and beta-D-mannuronate at their reducing end. | beta-elimination mechanism, substrate binding and catalytic site | Azotobacter chroococcum | |
| Eliminative cleavage of alginate to give oligosaccharides with 4-deoxy-alpha-L-erythro-hex-4-enuronosyl groups at their non-reducing ends and beta-D-mannuronate at their reducing end. | beta-elimination mechanism, substrate binding and catalytic site | Stenotrophomonas maltophilia | |
| Eliminative cleavage of alginate to give oligosaccharides with 4-deoxy-alpha-L-erythro-hex-4-enuronosyl groups at their non-reducing ends and beta-D-mannuronate at their reducing end. | beta-elimination mechanism, substrate binding and catalytic site | Chlorella virus | |
| Eliminative cleavage of alginate to give oligosaccharides with 4-deoxy-alpha-L-erythro-hex-4-enuronosyl groups at their non-reducing ends and beta-D-mannuronate at their reducing end. | beta-elimination mechanism, substrate binding and catalytic site | Laminaria digitata | |
| Eliminative cleavage of alginate to give oligosaccharides with 4-deoxy-alpha-L-erythro-hex-4-enuronosyl groups at their non-reducing ends and beta-D-mannuronate at their reducing end. | beta-elimination mechanism, substrate binding and catalytic site | Pelvetia canaliculata | |
| Eliminative cleavage of alginate to give oligosaccharides with 4-deoxy-alpha-L-erythro-hex-4-enuronosyl groups at their non-reducing ends and beta-D-mannuronate at their reducing end. | beta-elimination mechanism, substrate binding and catalytic site | Undaria pinnatifida | |
| Eliminative cleavage of alginate to give oligosaccharides with 4-deoxy-alpha-L-erythro-hex-4-enuronosyl groups at their non-reducing ends and beta-D-mannuronate at their reducing end. | beta-elimination mechanism, substrate binding and catalytic site | Turbo cornutus | |
| Eliminative cleavage of alginate to give oligosaccharides with 4-deoxy-alpha-L-erythro-hex-4-enuronosyl groups at their non-reducing ends and beta-D-mannuronate at their reducing end. | beta-elimination mechanism, substrate binding and catalytic site | Littorina sp. | |
| Eliminative cleavage of alginate to give oligosaccharides with 4-deoxy-alpha-L-erythro-hex-4-enuronosyl groups at their non-reducing ends and beta-D-mannuronate at their reducing end. | beta-elimination mechanism, substrate binding and catalytic site | Dollabella auricola | |
| Eliminative cleavage of alginate to give oligosaccharides with 4-deoxy-alpha-L-erythro-hex-4-enuronosyl groups at their non-reducing ends and beta-D-mannuronate at their reducing end. | beta-elimination mechanism, substrate binding and catalytic site | Choromytilus meridionalis | |
| Eliminative cleavage of alginate to give oligosaccharides with 4-deoxy-alpha-L-erythro-hex-4-enuronosyl groups at their non-reducing ends and beta-D-mannuronate at their reducing end. | beta-elimination mechanism, substrate binding and catalytic site | Perna perna | |
| Eliminative cleavage of alginate to give oligosaccharides with 4-deoxy-alpha-L-erythro-hex-4-enuronosyl groups at their non-reducing ends and beta-D-mannuronate at their reducing end. | beta-elimination mechanism, substrate binding and catalytic site | Haliotis tuberculata | |
| Eliminative cleavage of alginate to give oligosaccharides with 4-deoxy-alpha-L-erythro-hex-4-enuronosyl groups at their non-reducing ends and beta-D-mannuronate at their reducing end. | beta-elimination mechanism, substrate binding and catalytic site | Spisula solidissima | |
| Eliminative cleavage of alginate to give oligosaccharides with 4-deoxy-alpha-L-erythro-hex-4-enuronosyl groups at their non-reducing ends and beta-D-mannuronate at their reducing end. | beta-elimination mechanism, substrate binding and catalytic site | Pseudomonas alginovora | |
| Eliminative cleavage of alginate to give oligosaccharides with 4-deoxy-alpha-L-erythro-hex-4-enuronosyl groups at their non-reducing ends and beta-D-mannuronate at their reducing end. | beta-elimination mechanism, substrate binding and catalytic site | Colpomenia sinuosa | |
| Eliminative cleavage of alginate to give oligosaccharides with 4-deoxy-alpha-L-erythro-hex-4-enuronosyl groups at their non-reducing ends and beta-D-mannuronate at their reducing end. | beta-elimination mechanism, substrate binding and catalytic site | Eisenia bicyclis | |
| Eliminative cleavage of alginate to give oligosaccharides with 4-deoxy-alpha-L-erythro-hex-4-enuronosyl groups at their non-reducing ends and beta-D-mannuronate at their reducing end. | beta-elimination mechanism, substrate binding and catalytic site | Petalonia binghamiae | |
| Eliminative cleavage of alginate to give oligosaccharides with 4-deoxy-alpha-L-erythro-hex-4-enuronosyl groups at their non-reducing ends and beta-D-mannuronate at their reducing end. | beta-elimination mechanism, substrate binding and catalytic site | Fucus spp. | |
| Eliminative cleavage of alginate to give oligosaccharides with 4-deoxy-alpha-L-erythro-hex-4-enuronosyl groups at their non-reducing ends and beta-D-mannuronate at their reducing end. | beta-elimination mechanism, substrate binding and catalytic site | Ishige sp. | |
| Eliminative cleavage of alginate to give oligosaccharides with 4-deoxy-alpha-L-erythro-hex-4-enuronosyl groups at their non-reducing ends and beta-D-mannuronate at their reducing end. | beta-elimination mechanism, substrate binding and catalytic site | Sargassum sagamianum | |
| Eliminative cleavage of alginate to give oligosaccharides with 4-deoxy-alpha-L-erythro-hex-4-enuronosyl groups at their non-reducing ends and beta-D-mannuronate at their reducing end. | beta-elimination mechanism, substrate binding and catalytic site | Dictyopteris pacifica | |
| Eliminative cleavage of alginate to give oligosaccharides with 4-deoxy-alpha-L-erythro-hex-4-enuronosyl groups at their non-reducing ends and beta-D-mannuronate at their reducing end. | beta-elimination mechanism, substrate binding and catalytic site | Aplysia depilans | |
| Eliminative cleavage of alginate to give oligosaccharides with 4-deoxy-alpha-L-erythro-hex-4-enuronosyl groups at their non-reducing ends and beta-D-mannuronate at their reducing end. | beta-elimination mechanism, substrate binding and catalytic site | Alginovibrio aquatilis | |
| Eliminative cleavage of alginate to give oligosaccharides with 4-deoxy-alpha-L-erythro-hex-4-enuronosyl groups at their non-reducing ends and beta-D-mannuronate at their reducing end. | beta-elimination mechanism, substrate binding and catalytic site | Photobacterium sp. | |
| Eliminative cleavage of alginate to give oligosaccharides with 4-deoxy-alpha-L-erythro-hex-4-enuronosyl groups at their non-reducing ends and beta-D-mannuronate at their reducing end. | beta-elimination mechanism, substrate binding and catalytic site | Cobetia marina | |
| Eliminative cleavage of alginate to give oligosaccharides with 4-deoxy-alpha-L-erythro-hex-4-enuronosyl groups at their non-reducing ends and beta-D-mannuronate at their reducing end. | beta-elimination mechanism, substrate binding and catalytic site | Vibrio sinaloensis | |
| Eliminative cleavage of alginate to give oligosaccharides with 4-deoxy-alpha-L-erythro-hex-4-enuronosyl groups at their non-reducing ends and beta-D-mannuronate at their reducing end. | beta-elimination mechanism, substrate binding and catalytic site | Vibrio alginolyticus | |
| Eliminative cleavage of alginate to give oligosaccharides with 4-deoxy-alpha-L-erythro-hex-4-enuronosyl groups at their non-reducing ends and beta-D-mannuronate at their reducing end. | beta-elimination mechanism, substrate binding and catalytic site | Pseudomonas putida | |
| Eliminative cleavage of alginate to give oligosaccharides with 4-deoxy-alpha-L-erythro-hex-4-enuronosyl groups at their non-reducing ends and beta-D-mannuronate at their reducing end. | beta-elimination mechanism, substrate binding and catalytic site | Bacillus sp. (in: firmicutes) | |
| Eliminative cleavage of alginate to give oligosaccharides with 4-deoxy-alpha-L-erythro-hex-4-enuronosyl groups at their non-reducing ends and beta-D-mannuronate at their reducing end. | beta-elimination mechanism, substrate binding and catalytic site | Niallia circulans | |
| Eliminative cleavage of alginate to give oligosaccharides with 4-deoxy-alpha-L-erythro-hex-4-enuronosyl groups at their non-reducing ends and beta-D-mannuronate at their reducing end. | beta-elimination mechanism, substrate binding and catalytic site | Azotobacter vinelandii phage | |
| Eliminative cleavage of alginate to give oligosaccharides with 4-deoxy-alpha-L-erythro-hex-4-enuronosyl groups at their non-reducing ends and beta-D-mannuronate at their reducing end. | beta-elimination mechanism, substrate binding and catalytic site | Azotobacter phage A31 | |
| Eliminative cleavage of alginate to give oligosaccharides with 4-deoxy-alpha-L-erythro-hex-4-enuronosyl groups at their non-reducing ends and beta-D-mannuronate at their reducing end. | beta-elimination mechanism, substrate binding and catalytic site | Azotobacter phage A22 | |
| Eliminative cleavage of alginate to give oligosaccharides with 4-deoxy-alpha-L-erythro-hex-4-enuronosyl groups at their non-reducing ends and beta-D-mannuronate at their reducing end. | beta-elimination mechanism, substrate binding and catalytic site | Asteromyces cruciatus | |
| Eliminative cleavage of alginate to give oligosaccharides with 4-deoxy-alpha-L-erythro-hex-4-enuronosyl groups at their non-reducing ends and beta-D-mannuronate at their reducing end. | beta-elimination mechanism, substrate binding and catalytic site | Corollospora intermedia | |
| Eliminative cleavage of alginate to give oligosaccharides with 4-deoxy-alpha-L-erythro-hex-4-enuronosyl groups at their non-reducing ends and beta-D-mannuronate at their reducing end. | beta-elimination mechanism, substrate binding and catalytic site | Paradendryphiella salina | |
| Eliminative cleavage of alginate to give oligosaccharides with 4-deoxy-alpha-L-erythro-hex-4-enuronosyl groups at their non-reducing ends and beta-D-mannuronate at their reducing end. | beta-elimination mechanism, substrate binding and catalytic site | Paradendryphiella arenariae |
Source Tissue
| Source Tissue | Comment | Organism | Textmining |
|---|---|---|---|
| crystalline style | - |
Choromytilus meridionalis | - |
| crystalline style | - |
Perna perna | - |
| frond | - |
Colpomenia sinuosa | - |
| frond | - |
Eisenia bicyclis | - |
| frond | - |
Petalonia binghamiae | - |
| frond | - |
Ishige sp. | - |
| frond | - |
Sargassum sagamianum | - |
| frond | - |
Dictyopteris pacifica | - |
| frond tip | - |
Undaria pinnatifida | - |
| gut | - |
Aplysia depilans | - |
| hepatopancreas | - |
Haliotis corrugata | - |
| hepatopancreas | - |
Littorina sp. | - |
| hepatopancreas | - |
Dollabella auricola | - |
| hepatopancreas | - |
Haliotis tuberculata | - |
| midgut | - |
Turbo cornutus | - |
| additional information | strain H-4, can grow on alginate as sole carbon source | Pseudoalteromonas distincta | - |
| soft body part | - |
Spisula solidissima | - |
| style | - |
Spisula solidissima | - |
Specific Activity [micromol/min/mg]
| Specific Activity Minimum [µmol/min/mg] | Specific Activity Maximum [µmol/min/mg] | Comment | Organism |
|---|---|---|---|
| additional information | - |
assay methods, overview | Haliotis corrugata |
| additional information | - |
assay methods, overview | Choromytilus meridionalis |
| additional information | - |
assay methods, overview | Perna perna |
| additional information | - |
assay methods, overview | Haliotis tuberculata |
| additional information | - |
assay methods, overview | Pseudomonas alginovora |
| additional information | - |
assay methods, overview | Colpomenia sinuosa |
| additional information | - |
assay methods, overview | Eisenia bicyclis |
| additional information | - |
assay methods, overview | Petalonia binghamiae |
| additional information | - |
assay methods, overview | Fucus spp. |
| additional information | - |
assay methods, overview | Ishige sp. |
| additional information | - |
assay methods, overview | Sargassum sagamianum |
| additional information | - |
assay methods, overview | Dictyopteris pacifica |
| additional information | - |
assay methods, overview | Aplysia depilans |
| additional information | - |
assay methods, overview | Alginovibrio aquatilis |
| additional information | - |
assay methods, overview | Cobetia marina |
| additional information | - |
assay methods, overview | Vibrio sinaloensis |
| additional information | - |
assay methods, overview | Vibrio alginolyticus |
| additional information | - |
assay methods, overview | Azotobacter chroococcum |
| additional information | - |
assay methods, overview | Pseudomonas putida |
| additional information | - |
assay methods, overview | Pseudomonas aeruginosa |
| additional information | - |
assay methods, overview | Azotobacter vinelandii |
| additional information | - |
assay methods, overview | Bacillus sp. (in: firmicutes) |
| additional information | - |
assay methods, overview | Niallia circulans |
| additional information | - |
assay methods, overview, endolytic activity | Azotobacter vinelandii phage |
| additional information | - |
assay methods, overview | Azotobacter phage A31 |
| additional information | - |
assay methods, overview | Azotobacter phage A22 |
| additional information | - |
assay methods, overview | Asteromyces cruciatus |
| additional information | - |
assay methods, overview | Corollospora intermedia |
| additional information | - |
assay methods, overview | Paradendryphiella salina |
| additional information | - |
assay methods, overview | Paradendryphiella arenariae |
Substrates and Products (Substrate)
| Substrates | Comment Substrates | Organism | Products | Comment (Products) | Rev. | Reac. |
|---|---|---|---|---|---|---|
| acetyl-beta1,4-D-mannuronic acid | - |
Azotobacter phage A22 | ? | - |
? | |
| acetylated poly-beta1,4-D-mannuronic acid | endolytic activity | Photobacterium sp. | ? | - |
? | |
| alginate | a complex heteropolymer consisiting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid, depolymerization, substrate structure, overview | Azotobacter vinelandii | unsaturated algino-oligosaccharides | - |
? | |
| alginate | a complex heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid, depolymerization, substrate structure, overview | Azotobacter vinelandii | unsaturated algino-oligosaccharides | - |
? | |
| alginate | a complex heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid, depolymerization, substrate structure, overview | Pseudomonas syringae | unsaturated algino-oligosaccharides | - |
? | |
| alginate | a complex heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid, depolymerization, substrate structure, overview | Chlorella virus | unsaturated algino-oligosaccharides | - |
? | |
| alginate | a complex heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid, depolymerization, substrate structure, overview | Pseudomonas alginovora | unsaturated algino-oligosaccharides | - |
? | |
| alginate | a complex heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid, depolymerization, substrate structure, overview | Colpomenia sinuosa | unsaturated algino-oligosaccharides | - |
? | |
| alginate | a complex heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid, depolymerization, substrate structure, overview | Petalonia binghamiae | unsaturated algino-oligosaccharides | - |
? | |
| alginate | a complex heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid, depolymerization, substrate structure, overview | Fucus spp. | unsaturated algino-oligosaccharides | - |
? | |
| alginate | a complex heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid, depolymerization, substrate structure, overview | Ishige sp. | unsaturated algino-oligosaccharides | - |
? | |
| alginate | a complex heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid, depolymerization, substrate structure, overview | Aplysia depilans | unsaturated algino-oligosaccharides | - |
? | |
| alginate | a complex heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid, depolymerization, substrate structure, overview | Cobetia marina | unsaturated algino-oligosaccharides | - |
? | |
| alginate | a complex heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid, depolymerization, substrate structure, overview | Azotobacter phage A31 | unsaturated algino-oligosaccharides | - |
? | |
| alginate | a complex heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid, depolymerization, substrate structure, overview | Asteromyces cruciatus | unsaturated algino-oligosaccharides | - |
? | |
| alginate | a complex heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid, depolymerization, substrate structure, overview | Corollospora intermedia | unsaturated algino-oligosaccharides | - |
? | |
| alginate | a complex heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid, depolymerization, substrate structure, overview | Paradendryphiella arenariae | unsaturated algino-oligosaccharides | - |
? | |
| alginate | endolytic activity, a complex heteropolymer consisiting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid, depolymerization, substrate structure, overview | Paradendryphiella salina | unsaturated algino-oligosaccharides | - |
? | |
| alginate | endolytic activity, a complex heteropolymer consisiting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid, depolymerization, substrate structure, overview | Pseudomonas aeruginosa | unsaturated algino-oligosaccharides | - |
? | |
| alginate | endolytic activity, a complex heteropolymer consisiting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid, depolymerization, substrate structure, overview | Haliotis corrugata | unsaturated algino-oligosaccharides | - |
? | |
| alginate | endolytic activity, a complex heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid, depolymerization, substrate structure, overview | Pseudomonas putida | unsaturated algino-oligosaccharides | - |
? | |
| alginate | endolytic activity, a complex heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid, depolymerization, substrate structure, overview | Bacillus sp. (in: firmicutes) | unsaturated algino-oligosaccharides | - |
? | |
| alginate | endolytic activity, a complex heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid, depolymerization, substrate structure, overview | Niallia circulans | unsaturated algino-oligosaccharides | - |
? | |
| alginate | endolytic activity, a complex heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid, depolymerization, substrate structure, overview | Spisula solidissima | unsaturated algino-oligosaccharides | - |
? | |
| alginate | endolytic activity, a complex heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid, depolymerization, substrate structure, overview | Azotobacter vinelandii phage | unsaturated algino-oligosaccharides | - |
? | |
| alginate | endolytic activity, a complex heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid, depolymerization, substrate structure, overview | Laminaria digitata | unsaturated algino-oligosaccharides | - |
? | |
| alginate | endolytic activity, a complex heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid, depolymerization, substrate structure, overview | Azotobacter chroococcum | unsaturated algino-oligosaccharides | - |
? | |
| alginate | endolytic activity, a complex heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid, depolymerization, substrate structure, overview | Sphingomonas sp. | unsaturated algino-oligosaccharides | - |
? | |
| alginate | endolytic activity, a complex heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid, depolymerization, substrate structure, overview | Pseudomonas aeruginosa | unsaturated algino-oligosaccharides | - |
? | |
| alginate | endolytic activity, a complex heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid, depolymerization, substrate structure, overview | Stenotrophomonas maltophilia | unsaturated algino-oligosaccharides | - |
? | |
| alginate | endolytic activity, a complex heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid, depolymerization, substrate structure, overview | Pelvetia canaliculata | unsaturated algino-oligosaccharides | - |
? | |
| alginate | endolytic activity, a complex heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid, depolymerization, substrate structure, overview | Undaria pinnatifida | unsaturated algino-oligosaccharides | - |
? | |
| alginate | endolytic activity, a complex heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid, depolymerization, substrate structure, overview | Eisenia bicyclis | unsaturated algino-oligosaccharides | - |
? | |
| alginate | endolytic activity, a complex heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid, depolymerization, substrate structure, overview | Sargassum sagamianum | unsaturated algino-oligosaccharides | - |
? | |
| alginate | endolytic activity, a complex heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid, depolymerization, substrate structure, overview | Dictyopteris pacifica | unsaturated algino-oligosaccharides | - |
? | |
| alginate | endolytic activity, a complex heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid, depolymerization, substrate structure, overview | Alginovibrio aquatilis | unsaturated algino-oligosaccharides | - |
? | |
| alginate | endolytic activity, a complex heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid, depolymerization, substrate structure, overview | Photobacterium sp. | unsaturated algino-oligosaccharides | - |
? | |
| alginate | endolytic activity, a complex heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid, depolymerization, substrate structure, overview | Vibrio alginolyticus | unsaturated algino-oligosaccharides | - |
? | |
| alginate | endolytic activity, intracellular isozymes also show hydrolase activity on alginate, a complex heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid, depolymerization, substrate structure, overview | Pseudoalteromonas distincta | unsaturated algino-oligosaccharides | - |
? | |
| alginate | endolytic activity, preference for M-M linkages, a complex heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid, depolymerization, substrate structure, overview | Littorina sp. | unsaturated algino-oligosaccharides | - |
? | |
| alginate | endolytic activity, preference for M-M linkages, a complex heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid, depolymerization, substrate structure, overview | Dollabella auricola | unsaturated algino-oligosaccharides | - |
? | |
| alginate | endolytic activity, a complex heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid, depolymerization, substrate structure, overview | Vibrio sinaloensis | unsaturated algino-oligosaccharides | - |
? | |
| alginate | endolyticc activity, enzyme prefers to cleave G-M and M-M linkages, a complex heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid, depolymerization, substrate structure, overview | Haliotis tuberculata | unsaturated algino-oligosaccharides | - |
? | |
| alginate | enzyme prefers to cleave M-M linkages, a complex heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid, depolymerization, substrate structure, overview | Turbo cornutus | unsaturated algino-oligosaccharides | - |
? | |
| alginate | weak activity, a complex heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid, depolymerization, substrate structure, overview | Choromytilus meridionalis | unsaturated algino-oligosaccharides | - |
? | |
| alginate | weak activity, a complex heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid, depolymerization, substrate structure, overview | Perna perna | unsaturated algino-oligosaccharides | - |
? | |
| alginate | a heteropolymer consisiting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | Azotobacter vinelandii | unsaturated algino-oligosaccharides | - |
? | |
| alginate | a heteropolymer consisiting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | Paradendryphiella salina | unsaturated algino-oligosaccharides | - |
? | |
| alginate | a heteropolymer consisiting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | Pseudomonas aeruginosa | unsaturated algino-oligosaccharides | - |
? | |
| alginate | a heteropolymer consisiting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | Haliotis corrugata | unsaturated algino-oligosaccharides | - |
? | |
| alginate | a heteropolymer consisiting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | Petalonia binghamiae | unsaturated algino-oligosaccharides | - |
? | |
| alginate | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | Pseudomonas putida | unsaturated algino-oligosaccharides | - |
? | |
| alginate | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | Azotobacter vinelandii | unsaturated algino-oligosaccharides | - |
? | |
| alginate | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | Bacillus sp. (in: firmicutes) | unsaturated algino-oligosaccharides | - |
? | |
| alginate | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | Niallia circulans | unsaturated algino-oligosaccharides | - |
? | |
| alginate | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | Pseudomonas syringae | unsaturated algino-oligosaccharides | - |
? | |
| alginate | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | Spisula solidissima | unsaturated algino-oligosaccharides | - |
? | |
| alginate | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | Azotobacter vinelandii phage | unsaturated algino-oligosaccharides | - |
? | |
| alginate | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | Turbo cornutus | unsaturated algino-oligosaccharides | - |
? | |
| alginate | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | Littorina sp. | unsaturated algino-oligosaccharides | - |
? | |
| alginate | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | Laminaria digitata | unsaturated algino-oligosaccharides | - |
? | |
| alginate | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | Azotobacter chroococcum | unsaturated algino-oligosaccharides | - |
? | |
| alginate | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | Pseudoalteromonas distincta | unsaturated algino-oligosaccharides | - |
? | |
| alginate | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | Sphingomonas sp. | unsaturated algino-oligosaccharides | - |
? | |
| alginate | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | Pseudomonas aeruginosa | unsaturated algino-oligosaccharides | - |
? | |
| alginate | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | Stenotrophomonas maltophilia | unsaturated algino-oligosaccharides | - |
? | |
| alginate | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | Chlorella virus | unsaturated algino-oligosaccharides | - |
? | |
| alginate | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | Pelvetia canaliculata | unsaturated algino-oligosaccharides | - |
? | |
| alginate | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | Undaria pinnatifida | unsaturated algino-oligosaccharides | - |
? | |
| alginate | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | Dollabella auricola | unsaturated algino-oligosaccharides | - |
? | |
| alginate | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | Choromytilus meridionalis | unsaturated algino-oligosaccharides | - |
? | |
| alginate | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | Perna perna | unsaturated algino-oligosaccharides | - |
? | |
| alginate | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | Haliotis tuberculata | unsaturated algino-oligosaccharides | - |
? | |
| alginate | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | Pseudomonas alginovora | unsaturated algino-oligosaccharides | - |
? | |
| alginate | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | Colpomenia sinuosa | unsaturated algino-oligosaccharides | - |
? | |
| alginate | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | Eisenia bicyclis | unsaturated algino-oligosaccharides | - |
? | |
| alginate | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | Fucus spp. | unsaturated algino-oligosaccharides | - |
? | |
| alginate | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | Ishige sp. | unsaturated algino-oligosaccharides | - |
? | |
| alginate | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | Sargassum sagamianum | unsaturated algino-oligosaccharides | - |
? | |
| alginate | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | Dictyopteris pacifica | unsaturated algino-oligosaccharides | - |
? | |
| alginate | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | Aplysia depilans | unsaturated algino-oligosaccharides | - |
? | |
| alginate | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | Alginovibrio aquatilis | unsaturated algino-oligosaccharides | - |
? | |
| alginate | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | Photobacterium sp. | unsaturated algino-oligosaccharides | - |
? | |
| alginate | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | Cobetia marina | unsaturated algino-oligosaccharides | - |
? | |
| alginate | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | Vibrio sinaloensis | unsaturated algino-oligosaccharides | - |
? | |
| alginate | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | Vibrio alginolyticus | unsaturated algino-oligosaccharides | - |
? | |
| alginate | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | Azotobacter phage A31 | unsaturated algino-oligosaccharides | - |
? | |
| alginate | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | Asteromyces cruciatus | unsaturated algino-oligosaccharides | - |
? | |
| alginate | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | Corollospora intermedia | unsaturated algino-oligosaccharides | - |
? | |
| alginate | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | Paradendryphiella arenariae | unsaturated algino-oligosaccharides | - |
? | |
| alginate | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | Azotobacter chroococcum 4A1M | unsaturated algino-oligosaccharides | - |
? | |
| alginate | endolytic activity, a complex heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid, depolymerization, substrate structure, overview | Bacillus sp. (in: firmicutes) ATB-1015 | unsaturated algino-oligosaccharides | - |
? | |
| alginate | endolytic activity, a complex heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid, depolymerization, substrate structure, overview | Vibrio sinaloensis Alg-A | unsaturated algino-oligosaccharides | - |
? | |
| alginate | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | Vibrio sinaloensis Alg-A | unsaturated algino-oligosaccharides | - |
? | |
| alginate | endolytic activity, a complex heteropolymer consisiting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid, depolymerization, substrate structure, overview | Pseudomonas aeruginosa FRDI | unsaturated algino-oligosaccharides | - |
? | |
| alginate | endolytic activity, a complex heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid, depolymerization, substrate structure, overview | Pseudomonas aeruginosa FRDI | unsaturated algino-oligosaccharides | - |
? | |
| alginate | a complex heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid, depolymerization, substrate structure, overview | Pseudomonas alginovora XO17 | unsaturated algino-oligosaccharides | - |
? | |
| alginate | a heteropolymer consisting of beta1,4-D-mannuronic acid and alpha1,4-L-guluronic acid | Pseudomonas alginovora XO17 | unsaturated algino-oligosaccharides | - |
? | |
| additional information | assay methods, overview | Pseudomonas syringae | ? | - |
? | |
| additional information | assay methods, overview | Spisula solidissima | ? | - |
? | |
| additional information | assay methods, overview | Littorina sp. | ? | - |
? | |
| additional information | assay methods, overview | Laminaria digitata | ? | - |
? | |
| additional information | assay methods, overview | Azotobacter chroococcum | ? | - |
? | |
| additional information | assay methods, overview | Sphingomonas sp. | ? | - |
? | |
| additional information | assay methods, overview | Stenotrophomonas maltophilia | ? | - |
? | |
| additional information | assay methods, overview | Chlorella virus | ? | - |
? | |
| additional information | assay methods, overview | Pelvetia canaliculata | ? | - |
? | |
| additional information | assay methods, overview | Undaria pinnatifida | ? | - |
? | |
| additional information | assay methods, overview | Dollabella auricola | ? | - |
? | |
| additional information | assay methods, overview | Photobacterium sp. | ? | - |
? | |
| additional information | assay methods, overview, cleaves M-M and M-G linkages, but not G-GM linkages | Azotobacter vinelandii | ? | - |
? | |
| additional information | assay methods, overview, enzyme from strain CFI/MI possesses 6 subsites and preferably cleaves M-M linkages | Pseudomonas aeruginosa | ? | - |
? | |
| additional information | cleaves G-MM and G-GM linkages, but nt G-GM linkages | Azotobacter vinelandii | ? | - |
? | |
| additional information | endolytic activity | Niallia circulans | ? | - |
? | |
| additional information | endolytic activity | Azotobacter vinelandii phage | ? | - |
? | |
| additional information | endolytic activity, the enzyme possesses 5 subsites in its catalytic center, assay methods, overview | Turbo cornutus | ? | - |
? | |
| additional information | enzyme from strain CFI/MI possesses 6 subsites and preferably cleaves M-M linkages | Pseudomonas aeruginosa | ? | - |
? | |
| additional information | preference of M-MM or MM-M cleavage sequences | Vibrio sinaloensis | ? | - |
? | |
| additional information | the enzyme from strain H-4 shows multiple substrate specificities, assay methods, overview | Pseudoalteromonas distincta | ? | - |
? | |
| additional information | the enzyme possesses 5 subsites in its catalytic center, assay methods, overview | Haliotis tuberculata | ? | - |
? | |
| additional information | - |
Choromytilus meridionalis | ? | - |
? | |
| additional information | biological function of the enzyme | Pseudomonas putida | ? | - |
? | |
| additional information | biological function of the enzyme | Azotobacter vinelandii | ? | - |
? | |
| additional information | biological function of the enzyme | Bacillus sp. (in: firmicutes) | ? | - |
? | |
| additional information | biological function of the enzyme | Niallia circulans | ? | - |
? | |
| additional information | biological function of the enzyme | Pseudomonas syringae | ? | - |
? | |
| additional information | biological function of the enzyme | Spisula solidissima | ? | - |
? | |
| additional information | biological function of the enzyme | Azotobacter vinelandii phage | ? | - |
? | |
| additional information | biological function of the enzyme | Turbo cornutus | ? | - |
? | |
| additional information | biological function of the enzyme | Paradendryphiella salina | ? | - |
? | |
| additional information | biological function of the enzyme | Littorina sp. | ? | - |
? | |
| additional information | biological function of the enzyme | Laminaria digitata | ? | - |
? | |
| additional information | biological function of the enzyme | Azotobacter chroococcum | ? | - |
? | |
| additional information | biological function of the enzyme | Pseudoalteromonas distincta | ? | - |
? | |
| additional information | biological function of the enzyme | Sphingomonas sp. | ? | - |
? | |
| additional information | biological function of the enzyme | Stenotrophomonas maltophilia | ? | - |
? | |
| additional information | biological function of the enzyme | Chlorella virus | ? | - |
? | |
| additional information | biological function of the enzyme | Pelvetia canaliculata | ? | - |
? | |
| additional information | biological function of the enzyme | Undaria pinnatifida | ? | - |
? | |
| additional information | biological function of the enzyme | Dollabella auricola | ? | - |
? | |
| additional information | biological function of the enzyme | Perna perna | ? | - |
? | |
| additional information | biological function of the enzyme | Haliotis tuberculata | ? | - |
? | |
| additional information | biological function of the enzyme | Pseudomonas alginovora | ? | - |
? | |
| additional information | biological function of the enzyme | Colpomenia sinuosa | ? | - |
? | |
| additional information | biological function of the enzyme | Eisenia bicyclis | ? | - |
? | |
| additional information | biological function of the enzyme | Petalonia binghamiae | ? | - |
? | |
| additional information | biological function of the enzyme | Fucus spp. | ? | - |
? | |
| additional information | biological function of the enzyme | Ishige sp. | ? | - |
? | |
| additional information | biological function of the enzyme | Sargassum sagamianum | ? | - |
? | |
| additional information | biological function of the enzyme | Dictyopteris pacifica | ? | - |
? | |
| additional information | biological function of the enzyme | Aplysia depilans | ? | - |
? | |
| additional information | biological function of the enzyme | Alginovibrio aquatilis | ? | - |
? | |
| additional information | biological function of the enzyme | Photobacterium sp. | ? | - |
? | |
| additional information | biological function of the enzyme | Cobetia marina | ? | - |
? | |
| additional information | biological function of the enzyme | Vibrio sinaloensis | ? | - |
? | |
| additional information | biological function of the enzyme | Vibrio alginolyticus | ? | - |
? | |
| additional information | biological function of the enzyme | Azotobacter phage A31 | ? | - |
? | |
| additional information | biological function of the enzyme | Azotobacter phage A22 | ? | - |
? | |
| additional information | biological function of the enzyme | Asteromyces cruciatus | ? | - |
? | |
| additional information | biological function of the enzyme | Corollospora intermedia | ? | - |
? | |
| additional information | biological function of the enzyme | Paradendryphiella arenariae | ? | - |
? | |
| additional information | biological function of the enzyme, Pseudomonas aeruginosa produces a bacterial alginate which seems to be necessary for cell attachment to the capsule-like biofilm build in lung of infected humans suffering cystic fibrosis | Pseudomonas aeruginosa | ? | - |
? | |
| additional information | assay methods, overview | Azotobacter chroococcum 4A1M | ? | - |
? | |
| additional information | biological function of the enzyme | Azotobacter chroococcum 4A1M | ? | - |
? | |
| additional information | preference of M-MM or MM-M cleavage sequences | Vibrio sinaloensis Alg-A | ? | - |
? | |
| additional information | biological function of the enzyme | Vibrio sinaloensis Alg-A | ? | - |
? | |
| additional information | assay methods, overview, enzyme from strain CFI/MI possesses 6 subsites and preferably cleaves M-M linkages | Pseudomonas aeruginosa FRDI | ? | - |
? | |
| additional information | enzyme from strain CFI/MI possesses 6 subsites and preferably cleaves M-M linkages | Pseudomonas aeruginosa FRDI | ? | - |
? | |
| additional information | biological function of the enzyme | Pseudomonas alginovora XO17 | ? | - |
? | |
| poly-acetyl-beta1,4-D-mannuronic acid | - |
Pseudomonas putida | ? | - |
? | |
| poly-acetyl-beta1,4-D-mannuronic acid | - |
Azotobacter vinelandii | ? | - |
? | |
| poly-acetyl-beta1,4-D-mannuronic acid | - |
Azotobacter vinelandii phage | ? | - |
? | |
| poly-acetyl-beta1,4-D-mannuronic acid | - |
Stenotrophomonas maltophilia | ? | - |
? | |
| poly-acetyl-beta1,4-D-mannuronic acid | - |
Azotobacter phage A31 | ? | - |
? | |
| poly-alpha1,4-L-guluronic acid | - |
Azotobacter vinelandii | 4-deoxy-alpha-L-erythro-hex-4-enuronosyl-alpha-1,4-oligo-L-guluronate + L-guluronate | - |
? | |
| poly-alpha1,4-L-guluronic acid | - |
Bacillus sp. (in: firmicutes) | 4-deoxy-alpha-L-erythro-hex-4-enuronosyl-alpha-1,4-oligo-L-guluronate + L-guluronate | - |
? | |
| poly-alpha1,4-L-guluronic acid | - |
Colpomenia sinuosa | 4-deoxy-alpha-L-erythro-hex-4-enuronosyl-alpha-1,4-oligo-L-guluronate + L-guluronate | - |
? | |
| poly-alpha1,4-L-guluronic acid | - |
Eisenia bicyclis | 4-deoxy-alpha-L-erythro-hex-4-enuronosyl-alpha-1,4-oligo-L-guluronate + L-guluronate | - |
? | |
| poly-alpha1,4-L-guluronic acid | - |
Petalonia binghamiae | 4-deoxy-alpha-L-erythro-hex-4-enuronosyl-alpha-1,4-oligo-L-guluronate + L-guluronate | - |
? | |
| poly-alpha1,4-L-guluronic acid | - |
Ishige sp. | 4-deoxy-alpha-L-erythro-hex-4-enuronosyl-alpha-1,4-oligo-L-guluronate + L-guluronate | - |
? | |
| poly-alpha1,4-L-guluronic acid | weak activity in strain 1351 | Niallia circulans | 4-deoxy-alpha-L-erythro-hex-4-enuronosyl-alpha-1,4-oligo-L-guluronate + L-guluronate | - |
? | |
| poly-alpha1,4-L-guluronic acid | - |
Bacillus sp. (in: firmicutes) ATB-1015 | 4-deoxy-alpha-L-erythro-hex-4-enuronosyl-alpha-1,4-oligo-L-guluronate + L-guluronate | - |
? | |
| poly-alpha1,4-L-guluronic acid | endolytic activity, extra- and intracellular isozymes | Pseudoalteromonas distincta | ? | - |
? | |
| poly-beta1,4-D-mannuronic acid | - |
Pseudomonas putida | 4-deoxy-alpha-L-erythro-hex-4-enuronosyl-beta-1,4-oligo-D-mannuronate + D-mannuronate | - |
? | |
| poly-beta1,4-D-mannuronic acid | - |
Azotobacter vinelandii | 4-deoxy-alpha-L-erythro-hex-4-enuronosyl-beta-1,4-oligo-D-mannuronate + D-mannuronate | - |
? | |
| poly-beta1,4-D-mannuronic acid | - |
Pseudomonas syringae | 4-deoxy-alpha-L-erythro-hex-4-enuronosyl-beta-1,4-oligo-D-mannuronate + D-mannuronate | - |
? | |
| poly-beta1,4-D-mannuronic acid | - |
Spisula solidissima | 4-deoxy-alpha-L-erythro-hex-4-enuronosyl-beta-1,4-oligo-D-mannuronate + D-mannuronate | - |
? | |
| poly-beta1,4-D-mannuronic acid | - |
Turbo cornutus | 4-deoxy-alpha-L-erythro-hex-4-enuronosyl-beta-1,4-oligo-D-mannuronate + D-mannuronate | - |
? | |
| poly-beta1,4-D-mannuronic acid | - |
Azotobacter chroococcum | 4-deoxy-alpha-L-erythro-hex-4-enuronosyl-beta-1,4-oligo-D-mannuronate + D-mannuronate | - |
? | |
| poly-beta1,4-D-mannuronic acid | - |
Sphingomonas sp. | 4-deoxy-alpha-L-erythro-hex-4-enuronosyl-beta-1,4-oligo-D-mannuronate + D-mannuronate | - |
? | |
| poly-beta1,4-D-mannuronic acid | - |
Haliotis corrugata | 4-deoxy-alpha-L-erythro-hex-4-enuronosyl-beta-1,4-oligo-D-mannuronate + D-mannuronate | - |
? | |
| poly-beta1,4-D-mannuronic acid | - |
Stenotrophomonas maltophilia | 4-deoxy-alpha-L-erythro-hex-4-enuronosyl-beta-1,4-oligo-D-mannuronate + D-mannuronate | - |
? | |
| poly-beta1,4-D-mannuronic acid | - |
Chlorella virus | 4-deoxy-alpha-L-erythro-hex-4-enuronosyl-beta-1,4-oligo-D-mannuronate + D-mannuronate | - |
? | |
| poly-beta1,4-D-mannuronic acid | - |
Pelvetia canaliculata | 4-deoxy-alpha-L-erythro-hex-4-enuronosyl-beta-1,4-oligo-D-mannuronate + D-mannuronate | - |
? | |
| poly-beta1,4-D-mannuronic acid | - |
Undaria pinnatifida | 4-deoxy-alpha-L-erythro-hex-4-enuronosyl-beta-1,4-oligo-D-mannuronate + D-mannuronate | - |
? | |
| poly-beta1,4-D-mannuronic acid | - |
Haliotis tuberculata | 4-deoxy-alpha-L-erythro-hex-4-enuronosyl-beta-1,4-oligo-D-mannuronate + D-mannuronate | - |
? | |
| poly-beta1,4-D-mannuronic acid | - |
Pseudomonas alginovora | 4-deoxy-alpha-L-erythro-hex-4-enuronosyl-beta-1,4-oligo-D-mannuronate + D-mannuronate | - |
? | |
| poly-beta1,4-D-mannuronic acid | - |
Colpomenia sinuosa | 4-deoxy-alpha-L-erythro-hex-4-enuronosyl-beta-1,4-oligo-D-mannuronate + D-mannuronate | - |
? | |
| poly-beta1,4-D-mannuronic acid | - |
Eisenia bicyclis | 4-deoxy-alpha-L-erythro-hex-4-enuronosyl-beta-1,4-oligo-D-mannuronate + D-mannuronate | - |
? | |
| poly-beta1,4-D-mannuronic acid | - |
Petalonia binghamiae | 4-deoxy-alpha-L-erythro-hex-4-enuronosyl-beta-1,4-oligo-D-mannuronate + D-mannuronate | - |
? | |
| poly-beta1,4-D-mannuronic acid | - |
Ishige sp. | 4-deoxy-alpha-L-erythro-hex-4-enuronosyl-beta-1,4-oligo-D-mannuronate + D-mannuronate | - |
? | |
| poly-beta1,4-D-mannuronic acid | - |
Sargassum sagamianum | 4-deoxy-alpha-L-erythro-hex-4-enuronosyl-beta-1,4-oligo-D-mannuronate + D-mannuronate | - |
? | |
| poly-beta1,4-D-mannuronic acid | - |
Dictyopteris pacifica | 4-deoxy-alpha-L-erythro-hex-4-enuronosyl-beta-1,4-oligo-D-mannuronate + D-mannuronate | - |
? | |
| poly-beta1,4-D-mannuronic acid | - |
Aplysia depilans | 4-deoxy-alpha-L-erythro-hex-4-enuronosyl-beta-1,4-oligo-D-mannuronate + D-mannuronate | - |
? | |
| poly-beta1,4-D-mannuronic acid | - |
Cobetia marina | 4-deoxy-alpha-L-erythro-hex-4-enuronosyl-beta-1,4-oligo-D-mannuronate + D-mannuronate | - |
? | |
| poly-beta1,4-D-mannuronic acid | - |
Vibrio sinaloensis | 4-deoxy-alpha-L-erythro-hex-4-enuronosyl-beta-1,4-oligo-D-mannuronate + D-mannuronate | - |
? | |
| poly-beta1,4-D-mannuronic acid | weak activity | Choromytilus meridionalis | 4-deoxy-alpha-L-erythro-hex-4-enuronosyl-beta-1,4-oligo-D-mannuronate + D-mannuronate | - |
? | |
| poly-beta1,4-D-mannuronic acid | weak activity | Perna perna | 4-deoxy-alpha-L-erythro-hex-4-enuronosyl-beta-1,4-oligo-D-mannuronate + D-mannuronate | - |
? | |
| poly-beta1,4-D-mannuronic acid | low activity | Laminaria digitata | 4-deoxy-alpha-L-erythro-hex-4-enuronosyl-beta-1,4-oligo-D-mannuronate + D-mannuronate | - |
? | |
| poly-beta1,4-D-mannuronic acid | deacetylated | Bacillus sp. (in: firmicutes) | 4-deoxy-alpha-L-erythro-hex-4-enuronosyl-beta-1,4-oligo-D-mannuronate + D-mannuronate | - |
? | |
| poly-beta1,4-D-mannuronic acid | endolytic activity | Azotobacter chroococcum | 4-deoxy-alpha-L-erythro-hex-4-enuronosyl-beta-1,4-oligo-D-mannuronate + D-mannuronate | - |
? | |
| poly-beta1,4-D-mannuronic acid | endolytic activity | Vibrio alginolyticus | 4-deoxy-alpha-L-erythro-hex-4-enuronosyl-beta-1,4-oligo-D-mannuronate + D-mannuronate | - |
? | |
| poly-beta1,4-D-mannuronic acid | nonacetylated | Pseudomonas aeruginosa | 4-deoxy-alpha-L-erythro-hex-4-enuronosyl-beta-1,4-oligo-D-mannuronate + D-mannuronate | - |
? | |
| poly-beta1,4-D-mannuronic acid | preference for M-M linkages | Littorina sp. | 4-deoxy-alpha-L-erythro-hex-4-enuronosyl-beta-1,4-oligo-D-mannuronate + D-mannuronate | - |
? | |
| poly-beta1,4-D-mannuronic acid | preference for M-M linkages | Dollabella auricola | 4-deoxy-alpha-L-erythro-hex-4-enuronosyl-beta-1,4-oligo-D-mannuronate + D-mannuronate | - |
? | |
| poly-beta1,4-D-mannuronic acid | strain JBH2: deacetylated | Niallia circulans | 4-deoxy-alpha-L-erythro-hex-4-enuronosyl-beta-1,4-oligo-D-mannuronate + D-mannuronate | - |
? | |
| poly-beta1,4-D-mannuronic acid | strain JBH2: deacetylated | Paradendryphiella salina | 4-deoxy-alpha-L-erythro-hex-4-enuronosyl-beta-1,4-oligo-D-mannuronate + D-mannuronate | - |
? | |
| poly-beta1,4-D-mannuronic acid | deacetylated | Bacillus sp. (in: firmicutes) ATB-1015 | 4-deoxy-alpha-L-erythro-hex-4-enuronosyl-beta-1,4-oligo-D-mannuronate + D-mannuronate | - |
? | |
| poly-beta1,4-D-mannuronic acid | - |
Vibrio sinaloensis Alg-A | 4-deoxy-alpha-L-erythro-hex-4-enuronosyl-beta-1,4-oligo-D-mannuronate + D-mannuronate | - |
? | |
| poly-beta1,4-D-mannuronic acid | nonacetylated | Pseudomonas aeruginosa FRDI | 4-deoxy-alpha-L-erythro-hex-4-enuronosyl-beta-1,4-oligo-D-mannuronate + D-mannuronate | - |
? | |
| poly-beta1,4-D-mannuronic acid | - |
Pseudomonas alginovora XO17 | 4-deoxy-alpha-L-erythro-hex-4-enuronosyl-beta-1,4-oligo-D-mannuronate + D-mannuronate | - |
? | |
| poly-beta1,4-D-mannuronic acid | endolytic activity, extra- and intracellular isozymes | Pseudoalteromonas distincta | ? | - |
? | |
Subunits
| Subunits | Comment | Organism |
|---|---|---|
| additional information | structural analysis | Sphingomonas sp. |
Synonyms
| Synonyms | Comment | Organism |
|---|---|---|
| Alg-A | - |
Vibrio sinaloensis |
| alginase I | - |
Haliotis corrugata |
| alginate lyase | - |
Sphingomonas sp. |
| alginate lyase | - |
Pseudoalteromonas distincta |
| alginate lyase | - |
Pseudomonas aeruginosa |
| alginate lyase | - |
Azotobacter vinelandii |
| alginate lyase | - |
Pseudomonas syringae |
| alginate lyase | - |
Haliotis corrugata |
| alginate lyase | - |
Azotobacter chroococcum |
| alginate lyase | - |
Stenotrophomonas maltophilia |
| alginate lyase | - |
Chlorella virus |
| alginate lyase | - |
Laminaria digitata |
| alginate lyase | - |
Pelvetia canaliculata |
| alginate lyase | - |
Undaria pinnatifida |
| alginate lyase | - |
Turbo cornutus |
| alginate lyase | - |
Littorina sp. |
| alginate lyase | - |
Dollabella auricola |
| alginate lyase | - |
Choromytilus meridionalis |
| alginate lyase | - |
Perna perna |
| alginate lyase | - |
Haliotis tuberculata |
| alginate lyase | - |
Spisula solidissima |
| alginate lyase | - |
Pseudomonas alginovora |
| alginate lyase | - |
Colpomenia sinuosa |
| alginate lyase | - |
Eisenia bicyclis |
| alginate lyase | - |
Petalonia binghamiae |
| alginate lyase | - |
Fucus spp. |
| alginate lyase | - |
Ishige sp. |
| alginate lyase | - |
Sargassum sagamianum |
| alginate lyase | - |
Dictyopteris pacifica |
| alginate lyase | - |
Aplysia depilans |
| alginate lyase | - |
Alginovibrio aquatilis |
| alginate lyase | - |
Photobacterium sp. |
| alginate lyase | - |
Cobetia marina |
| alginate lyase | - |
Vibrio sinaloensis |
| alginate lyase | - |
Vibrio alginolyticus |
| alginate lyase | - |
Pseudomonas putida |
| alginate lyase | - |
Bacillus sp. (in: firmicutes) |
| alginate lyase | - |
Niallia circulans |
| alginate lyase | - |
Azotobacter vinelandii phage |
| alginate lyase | - |
Azotobacter phage A31 |
| alginate lyase | - |
Azotobacter phage A22 |
| alginate lyase | - |
Asteromyces cruciatus |
| alginate lyase | - |
Corollospora intermedia |
| alginate lyase | - |
Paradendryphiella salina |
| alginate lyase | - |
Paradendryphiella arenariae |
| AlgL | - |
Pseudomonas aeruginosa |
| AlgL | - |
Azotobacter vinelandii |
| AlgL | - |
Azotobacter chroococcum |
| AlgL | - |
Bacillus sp. (in: firmicutes) |
| AlgL | - |
Niallia circulans |
| ALY | - |
Sphingomonas sp. |
| CL2 | - |
Chlorella virus |
| poly(M)lyase | - |
Azotobacter chroococcum |
Temperature Optimum [°C]
| Temperature Optimum [°C] | Temperature Optimum Maximum [°C] | Comment | Organism |
|---|---|---|---|
| 28 | 30 | - |
Pseudomonas putida |
| 28 | 30 | - |
Stenotrophomonas maltophilia |
| 30 | - |
at pH 7.5 | Azotobacter chroococcum |
| 30 | - |
- |
Pelvetia canaliculata |
| 30 | - |
extracellular isozyme | Pseudoalteromonas distincta |
| 30 | - |
- |
Undaria pinnatifida |
| 35 | - |
intracellular isozyme | Pseudoalteromonas distincta |
| 37 | - |
- |
Bacillus sp. (in: firmicutes) |
| 37 | - |
about | Spisula solidissima |
| 45 | - |
- |
Paradendryphiella salina |
| 50 | - |
strain JBH2 | Niallia circulans |
| 60 | - |
strain 4A1M | Azotobacter chroococcum |
| 70 | - |
- |
Sphingomonas sp. |
Temperature Range [°C]
| Temperature Minimum [°C] | Temperature Maximum [°C] | Comment | Organism |
|---|---|---|---|
| 25 | 50 | - |
Pseudomonas alginovora |
pH Optimum
| pH Optimum Minimum | pH Optimum Maximum | Comment | Organism |
|---|---|---|---|
| 5 | 6 | - |
Paradendryphiella salina |
| 5.6 | - |
in presence of 0.05 M NaCl | Littorina sp. |
| 5.8 | - |
strain JBH2 | Niallia circulans |
| 6 | - |
strain 4A1M | Azotobacter chroococcum |
| 6 | - |
about | Spisula solidissima |
| 6 | - |
- |
Paradendryphiella arenariae |
| 7 | 7.5 | intracellular isozyme | Pseudoalteromonas distincta |
| 7 | 8 | - |
Dollabella auricola |
| 7 | - |
- |
Pseudomonas aeruginosa |
| 7 | - |
about, groups 3,4,5,8 | Niallia circulans |
| 7.4 | 7.6 | - |
Haliotis corrugata |
| 7.5 | 8 | - |
Sphingomonas sp. |
| 7.5 | - |
extracellular isozyme | Pseudoalteromonas distincta |
| 7.5 | - |
- |
Pelvetia canaliculata |
| 7.5 | 9.2 | isozyme SP1 | Turbo cornutus |
| 7.5 | 8.5 | - |
Pseudomonas alginovora |
| 7.5 | - |
- |
Bacillus sp. (in: firmicutes) |
| 7.5 | - |
- |
Azotobacter phage A22 |
| 7.7 | 7.8 | - |
Stenotrophomonas maltophilia |
| 7.7 | - |
- |
Undaria pinnatifida |
| 7.7 | 9.4 | isozyme SP2 | Turbo cornutus |
| 7.7 | 7.8 | - |
Pseudomonas putida |
| 7.7 | - |
- |
Azotobacter vinelandii phage |
| 8 | 8.5 | in presence of 0.2 M NaCl | Littorina sp. |
| 8 | - |
- |
Haliotis tuberculata |
| 8 | - |
- |
Alginovibrio aquatilis |
| 8.1 | 8.4 | - |
Azotobacter vinelandii |
| 8.2 | - |
- |
Vibrio alginolyticus |
| 9.6 | - |
- |
Aplysia depilans |
| 10.5 | - |
- |
Chlorella virus |
pI Value
| Organism | Comment | pI Value Maximum | pI Value |
|---|---|---|---|
| Vibrio alginolyticus | - |
4.7 | 4.6 |
| Pseudoalteromonas distincta | extracellular isozyme | 4.8 | 4.7 |
| Azotobacter vinelandii | - |
- |
5.1 |
| Pseudoalteromonas distincta | intracellular isozyme | - |
5.4 |
| Pseudomonas alginovora | - |
- |
5.8 |
| Photobacterium sp. | - |
- |
6 |
| Pseudoalteromonas distincta | intracellular isozyme | - |
6.7 |
| Sphingomonas sp. | ALY-II | - |
6.8 |
| Cobetia marina | - |
- |
7.8 |
| Sphingomonas sp. | ALY-I | - |
9 |
| Pseudomonas aeruginosa | calculated | - |
9 |
| Sphingomonas sp. | ALY-III | - |
10.2 |
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