Cloned (Comment) | Organism |
---|---|
gene pecCl1, DNA amino acid sequence determination and analysis, phylogenetic analysis, possible cis-regulatory elements and transcription factor binding sites that may be involved in the regulation of genetic expression were detected in the promoter region of the gene | Colletotrichum lindemuthianum |
Protein Variants | Comment | Organism |
---|---|---|
additional information | genetic inactivation, function of the pecCl1 gene is assessed using the genetic inactivation strategy known as split-marker, protoplast transformation, molecular phenotype, overview | Colletotrichum lindemuthianum |
Metals/Ions | Comment | Organism | Structure |
---|---|---|---|
Ca2+ | required, 1 mM | Colletotrichum lindemuthianum |
Organism | UniProt | Comment | Textmining |
---|---|---|---|
Colletotrichum lindemuthianum | J9R912 | single copy gene pecCl1 | - |
Source Tissue | Comment | Organism | Textmining |
---|---|---|---|
additional information | analysis of the differential expression of pecCl1 during different stages of infectionby the phytopathgen shows a significant increase in pecCl1 expression five days after infection, at the onset of the necrotrophic phase | Colletotrichum lindemuthianum | - |
Temperature Optimum [°C] | Temperature Optimum Maximum [°C] | Comment | Organism |
---|---|---|---|
40 | - |
assay at | Colletotrichum lindemuthianum |
pH Optimum Minimum | pH Optimum Maximum | Comment | Organism |
---|---|---|---|
8.5 | - |
assay at | Colletotrichum lindemuthianum |
Organism | Comment | Expression |
---|---|---|
Colletotrichum lindemuthianum | analysis of the differential expression of pecCl1 during different stages of infection shows a significant increase in pecCl1 expression five days after infection, at the onset of the necrotrophic phase | up |
General Information | Comment | Organism |
---|---|---|
evolution | the enzyme belongs to te pectate lyase family | Colletotrichum lindemuthianum |
malfunction | gene inactivation does not result in complete loss of pectate lyase activity, but the symptoms of anthracnose in the infected host plants are reduced | Colletotrichum lindemuthianum |
physiological function | the organism causes anthracnose in infected bean plants, pectate lyase encoded by the pecCl1 gene is an important determinant for the aggressiveness of Colletotrichum lindemuthianum | Colletotrichum lindemuthianum |