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Literature summary for 4.2.1.84 extracted from

  • Cheng, Z.; Jiang, S.; Zhou, Z.
    Substrate access tunnel engineering for improving the catalytic activity of a thermophilic nitrile hydratase toward pyridine and pyrazine nitriles (2021), Biochem. Biophys. Res. Commun., 575, 8-13.
    View publication on PubMed

Protein Variants

Protein Variants Comment Organism
L48H mutation of residue located at the substrate access tunnel of subunit NthB, specific activities towards 3-cyanopyridine, 2-cyanopyridine and cyanopyrazine are 2.4fold, 2.8fold and 3.1fold higher tha that of wild-type. Introduced H48 can form a long-lasting hydrogen bond with E166 of sub unit NthA, which contributes to the expansion of the entrance of substrate access tunnel Caldalkalibacillus thermarum

KM Value [mM]

KM Value [mM] KM Value Maximum [mM] Substrate Comment Organism Structure
0.6
-
3-Cyanopyridine mutant L48H, pH 7.4, 30°C Caldalkalibacillus thermarum
1.2
-
3-Cyanopyridine wild-type, pH 7.4, 30°C Caldalkalibacillus thermarum

Organism

Organism UniProt Comment Textmining
Caldalkalibacillus thermarum F5L3T2 and F5L3T3 F5L3T2 i.e. subunit NthA, F5L3T3 i.e. subunit NthB
-
Caldalkalibacillus thermarum TA2. A1 F5L3T2 and F5L3T3 F5L3T2 i.e. subunit NthA, F5L3T3 i.e. subunit NthB
-

Specific Activity [micromol/min/mg]

Specific Activity Minimum [µmol/min/mg] Specific Activity Maximum [µmol/min/mg] Comment Organism
217.2
-
wild-type, substrate 2-cyanopyridine, pH 7.4, 30°C Caldalkalibacillus thermarum
225.9
-
wild-type, substrate cyanopyrazine, pH 7.4, 30°C Caldalkalibacillus thermarum
383.8
-
wild-type, substrate 3-cyanopyridine, pH 7.4, 30°C Caldalkalibacillus thermarum
608.2
-
mutant L48H, substrate 2-cyanopyridine, pH 7.4, 30°C Caldalkalibacillus thermarum
690.5
-
mutant L48H, substrate cyanopyrazine, pH 7.4, 30°C Caldalkalibacillus thermarum
902.3
-
mutant L48H, substrate 3-cyanopyridine, pH 7.4, 30°C Caldalkalibacillus thermarum

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
2-cyanopyridine + H2O
-
Caldalkalibacillus thermarum pyridine-2-carbamide
-
?
2-cyanopyridine + H2O
-
Caldalkalibacillus thermarum TA2. A1 pyridine-2-carbamide
-
?
3-cyanopyridine + H2O
-
Caldalkalibacillus thermarum nicotinamide
-
?
3-cyanopyridine + H2O
-
Caldalkalibacillus thermarum TA2. A1 nicotinamide
-
?
cyanopyrazine + H2O
-
Caldalkalibacillus thermarum pyrazincarbamide
-
?
cyanopyrazine + H2O
-
Caldalkalibacillus thermarum TA2. A1 pyrazincarbamide
-
?

Turnover Number [1/s]

Turnover Number Minimum [1/s] Turnover Number Maximum [1/s] Substrate Comment Organism Structure
352.1
-
3-Cyanopyridine wild-type, pH 7.4, 30°C Caldalkalibacillus thermarum
833.2
-
3-Cyanopyridine mutant L48H, pH 7.4, 30°C Caldalkalibacillus thermarum

kcat/KM [mM/s]

kcat/KM Value [1/mMs-1] kcat/KM Value Maximum [1/mMs-1] Substrate Comment Organism Structure
293.4
-
3-Cyanopyridine wild-type, pH 7.4, 30°C Caldalkalibacillus thermarum
1388.7
-
3-Cyanopyridine mutant L48H, pH 7.4, 30°C Caldalkalibacillus thermarum