Cloned (Comment) | Organism |
---|---|
DNA and amino acid sequence determination and analysis, sequence comparisons and phylogenetic analysis, quantitative real-time PCR enzyme expression analysis | Xiphophorus maculatus |
DNA and amino acid sequence determination and analysis, sequence comparisons and phylogenetic analysis, quantitative real-time PCR enzyme expression analysis | Xiphophorus couchianus |
Natural Substrates | Organism | Comment (Nat. Sub.) | Natural Products | Comment (Nat. Pro.) | Rev. | Reac. |
---|---|---|---|---|---|---|
cyclobutadipyrimidine (in DNA) | Xiphophorus maculatus | - |
2 pyrimidine residues (in DNA) | - |
? | |
cyclobutadipyrimidine (in DNA) | Xiphophorus couchianus | - |
2 pyrimidine residues (in DNA) | - |
? | |
cyclobutadipyrimidine (in DNA) | Xiphophorus maculatus Jp 163 B | - |
2 pyrimidine residues (in DNA) | - |
? |
Organism | UniProt | Comment | Textmining |
---|---|---|---|
Xiphophorus couchianus | - |
and F1 interspecies hybrids made by crossing these two parental lines, i.e. Xiphophorus maculatus Jp 163 B × Xiphophorus couchianus | - |
Xiphophorus maculatus | - |
and F1 interspecies hybrids made by crossing these two parental lines, i.e. Xiphophorus maculatus Jp 163 B × Xiphophorus couchianus | - |
Xiphophorus maculatus Jp 163 B | - |
and F1 interspecies hybrids made by crossing these two parental lines, i.e. Xiphophorus maculatus Jp 163 B × Xiphophorus couchianus | - |
Source Tissue | Comment | Organism | Textmining |
---|---|---|---|
brain | - |
Xiphophorus maculatus | - |
brain | - |
Xiphophorus couchianus | - |
eye | - |
Xiphophorus maculatus | - |
eye | - |
Xiphophorus couchianus | - |
gill | - |
Xiphophorus maculatus | - |
gill | - |
Xiphophorus couchianus | - |
heart | - |
Xiphophorus maculatus | - |
heart | - |
Xiphophorus couchianus | - |
liver | - |
Xiphophorus maculatus | - |
liver | - |
Xiphophorus couchianus | - |
additional information | tissue expression pattern, overview. The F1 interspecies hybrid exhibits much higher basal transcription levels of CPD photolyase then either parental line in light responsive organs (about 30fold in skin and about 4fold in eyes). For other organs, the F1 interspecies hybrid exhibits higher basal expression of CPD photolyase than either parental line in gill and heart, while showing basal levels similar to the Xiphophorus maculatus in brain (about 2.5fold above Xiphophorus couchianus) and basal levels similar to Xiphophorus couchianus for testis and liver (9.4 and 7.7fold above Xiphophorus maculatus, respectively) | Xiphophorus maculatus | - |
additional information | tissue expression pattern, overview. The F1 interspecies hybrid exhibits much higher basal transcription levels of CPD photolyase then either parental line in light responsive organs (about 30fold in skin and about 4fold in eyes). For other organs, the F1 interspecies hybrid exhibits higher basal expression of CPD photolyase than either parental line in gill and heart, while showing basal levels similar to the Xiphophorus maculatus in brain (about 2.5fold above Xiphophorus couchianus) and basal levels similar to Xiphophorus couchianus for testis and liver (9.4 and 7.7fold above Xiphophorus maculatus, respectively) | Xiphophorus couchianus | - |
skin | fluorescent light induction of CPD photolyase in skin | Xiphophorus maculatus | - |
skin | fluorescent light induction of CPD photolyase in skin | Xiphophorus couchianus | - |
testis | testis exhibits very high basal expression values in the F1 interspecies hybrid for CPD photolyase, about 9.4fold higher than liver | Xiphophorus maculatus | - |
testis | testis exhibits very high basal expression values in the F1 interspecies hybrid for CPD photolyase, about 9.4fold higher than liver | Xiphophorus couchianus | - |
Substrates | Comment Substrates | Organism | Products | Comment (Products) | Rev. | Reac. |
---|---|---|---|---|---|---|
cyclobutadipyrimidine (in DNA) | - |
Xiphophorus maculatus | 2 pyrimidine residues (in DNA) | - |
? | |
cyclobutadipyrimidine (in DNA) | - |
Xiphophorus couchianus | 2 pyrimidine residues (in DNA) | - |
? | |
cyclobutadipyrimidine (in DNA) | - |
Xiphophorus maculatus Jp 163 B | 2 pyrimidine residues (in DNA) | - |
? |
Synonyms | Comment | Organism |
---|---|---|
CPD photolyase | - |
Xiphophorus maculatus |
CPD photolyase | - |
Xiphophorus couchianus |
Organism | Comment | Expression |
---|---|---|
Xiphophorus maculatus | photolyase gene expression patterns before and after exposure to fluorescent light in Xiphophorus maculatus, Xiphophorus couchianus, and for F1 interspecies hybrids produced from crossing these two parental lines (Xiphophorus maculatus Jp 163 B × Xiphophorus couchianus). Fluorescent light induction of CPD photolyase in skin | up |
Xiphophorus couchianus | photolyase gene expression patterns before and after exposure to fluorescent light in Xiphophorus maculatus, Xiphophorus couchianus, and for F1 interspecies hybrids produced from crossing these two parental lines (Xiphophorus maculatus Jp 163 B × Xiphophorus couchianus). Fluorescent light induction of CPD photolyase in skin | up |
General Information | Comment | Organism |
---|---|---|
physiological function | UVB-induced DNA lesions in Xiphophorus fishes are thought to primarily be repaired via light dependent CPD and 6-4PP specific photolyases, cf. EC 4.1.99.13 | Xiphophorus maculatus |
physiological function | UVB-induced DNA lesions in Xiphophorus fishes are thought to primarily be repaired via light dependent CPD and 6-4PP specific photolyases, cf. EC 4.1.99.13 | Xiphophorus couchianus |