BRENDA - Enzyme Database
show all sequences of 4.1.2.9

Phosphoketolase in Rhodotorula graminis and other yeasts

Whitworth, D.A.; Ratledge, C.; J. Gen. Microbiol. 102, 397-401 (1977)
No PubMed abstract available

Data extracted from this reference:

Activating Compound
Activating Compound
Commentary
Organism
Structure
phosphate
Km: 5.55 mM; required
Rhodotorula graminis
Inhibitors
Inhibitors
Commentary
Organism
Structure
acetyl-CoA
-
Rhodotorula graminis
ATP
-
Rhodotorula graminis
citrate
-
Rhodotorula graminis
dodecanoyl-CoA
-
Rhodotorula graminis
NADH
-
Rhodotorula graminis
NADPH
-
Rhodotorula graminis
phosphoenolpyruvate
-
Rhodotorula graminis
KM Value [mM]
KM Value [mM]
KM Value Maximum [mM]
Substrate
Commentary
Organism
Structure
1.25
-
D-xylulose 5-phosphate
-
Rhodotorula graminis
Metals/Ions
Metals/Ions
Commentary
Organism
Structure
Mg2+
required, Km: 0.000395 mM
Rhodotorula graminis
Natural Substrates/ Products (Substrates)
Natural Substrates
Organism
Commentary (Nat. Sub.)
Natural Products
Commentary (Nat. Pro.)
Organism (Nat. Pro.)
Reversibility
additional information
Rhodotorula graminis
contribution of phosphoketolase to glucose catabolism is only slight
?
-
-
-
Organism
Organism
Primary Accession No. (UniProt)
Commentary
Textmining
Candida sp. (in: Saccharomycetales)
-
-
-
Candida sp. (in: Saccharomycetales) 107
-
-
-
Candida tropicalis
-
-
-
Rhodotorula glutinis
-
-
-
Rhodotorula graminis
-
-
-
Vanrija humicola
-
-
-
Oxidation Stability
Oxidation Stability
Organism
phosphate is essential for stability
Rhodotorula graminis
Purification (Commentary)
Commentary
Organism
-
Rhodotorula graminis
Storage Stability
Storage Stability
Organism
4C, 24 h, 50% loss of activity
Rhodotorula graminis
Substrates and Products (Substrate)
Substrates
Commentary Substrates
Literature (Substrates)
Organism
Products
Commentary (Products)
Literature (Products)
Organism (Products)
Reversibility
D-fructose 6-phosphate + phosphate
-
5097
Vanrija humicola
?
-
-
-
-
D-Xylulose 5-phosphate + phosphate
-
5097
Rhodotorula glutinis
Acetyl phosphate + D-glyceraldehyde 3-phosphate + H2O
-
-
-
-
D-Xylulose 5-phosphate + phosphate
-
5097
Candida tropicalis
Acetyl phosphate + D-glyceraldehyde 3-phosphate + H2O
-
-
-
-
D-Xylulose 5-phosphate + phosphate
-
5097
Rhodotorula graminis
Acetyl phosphate + D-glyceraldehyde 3-phosphate + H2O
-
-
-
-
D-Xylulose 5-phosphate + phosphate
-
5097
Candida sp. (in: Saccharomycetales)
Acetyl phosphate + D-glyceraldehyde 3-phosphate + H2O
-
-
-
-
D-Xylulose 5-phosphate + phosphate
-
5097
Vanrija humicola
Acetyl phosphate + D-glyceraldehyde 3-phosphate + H2O
-
-
-
-
D-Xylulose 5-phosphate + phosphate
-
5097
Candida sp. (in: Saccharomycetales) 107
Acetyl phosphate + D-glyceraldehyde 3-phosphate + H2O
-
-
-
-
additional information
contribution of phosphoketolase to glucose catabolism is only slight
5097
Rhodotorula graminis
?
-
-
-
-
Temperature Optimum [C]
Temperature Optimum [C]
Temperature Optimum Maximum [C]
Commentary
Organism
30
-
-
Rhodotorula graminis
Temperature Range [C]
Temperature Minimum [C]
Temperature Maximum [C]
Commentary
Organism
27.5
32.5
27.5C: about 70% of maximal activity, 32.5C: about 30% of maximal activity
Rhodotorula graminis
pH Optimum
pH Optimum Minimum
pH Optimum Maximum
Commentary
Organism
6
-
-
Rhodotorula graminis
pH Range
pH Minimum
pH Maximum
Commentary
Organism
5.5
7
about 40% of maximal activity at pH 5.5 and at pH 7.0
Rhodotorula graminis
Cofactor
Cofactor
Commentary
Organism
Structure
thiamine diphosphate
Km: 0.000404 mM; required
Rhodotorula graminis
Activating Compound (protein specific)
Activating Compound
Commentary
Organism
Structure
phosphate
Km: 5.55 mM; required
Rhodotorula graminis
Cofactor (protein specific)
Cofactor
Commentary
Organism
Structure
thiamine diphosphate
Km: 0.000404 mM; required
Rhodotorula graminis
Inhibitors (protein specific)
Inhibitors
Commentary
Organism
Structure
acetyl-CoA
-
Rhodotorula graminis
ATP
-
Rhodotorula graminis
citrate
-
Rhodotorula graminis
dodecanoyl-CoA
-
Rhodotorula graminis
NADH
-
Rhodotorula graminis
NADPH
-
Rhodotorula graminis
phosphoenolpyruvate
-
Rhodotorula graminis
KM Value [mM] (protein specific)
KM Value [mM]
KM Value Maximum [mM]
Substrate
Commentary
Organism
Structure
1.25
-
D-xylulose 5-phosphate
-
Rhodotorula graminis
Metals/Ions (protein specific)
Metals/Ions
Commentary
Organism
Structure
Mg2+
required, Km: 0.000395 mM
Rhodotorula graminis
Natural Substrates/ Products (Substrates) (protein specific)
Natural Substrates
Organism
Commentary (Nat. Sub.)
Natural Products
Commentary (Nat. Pro.)
Organism (Nat. Pro.)
Reversibility
additional information
Rhodotorula graminis
contribution of phosphoketolase to glucose catabolism is only slight
?
-
-
-
Oxidation Stability (protein specific)
Oxidation Stability
Organism
phosphate is essential for stability
Rhodotorula graminis
Purification (Commentary) (protein specific)
Commentary
Organism
-
Rhodotorula graminis
Storage Stability (protein specific)
Storage Stability
Organism
4C, 24 h, 50% loss of activity
Rhodotorula graminis
Substrates and Products (Substrate) (protein specific)
Substrates
Commentary Substrates
Literature (Substrates)
Organism
Products
Commentary (Products)
Literature (Products)
Organism (Products)
Reversibility
D-fructose 6-phosphate + phosphate
-
5097
Vanrija humicola
?
-
-
-
-
D-Xylulose 5-phosphate + phosphate
-
5097
Rhodotorula glutinis
Acetyl phosphate + D-glyceraldehyde 3-phosphate + H2O
-
-
-
-
D-Xylulose 5-phosphate + phosphate
-
5097
Candida tropicalis
Acetyl phosphate + D-glyceraldehyde 3-phosphate + H2O
-
-
-
-
D-Xylulose 5-phosphate + phosphate
-
5097
Rhodotorula graminis
Acetyl phosphate + D-glyceraldehyde 3-phosphate + H2O
-
-
-
-
D-Xylulose 5-phosphate + phosphate
-
5097
Candida sp. (in: Saccharomycetales)
Acetyl phosphate + D-glyceraldehyde 3-phosphate + H2O
-
-
-
-
D-Xylulose 5-phosphate + phosphate
-
5097
Vanrija humicola
Acetyl phosphate + D-glyceraldehyde 3-phosphate + H2O
-
-
-
-
D-Xylulose 5-phosphate + phosphate
-
5097
Candida sp. (in: Saccharomycetales) 107
Acetyl phosphate + D-glyceraldehyde 3-phosphate + H2O
-
-
-
-
additional information
contribution of phosphoketolase to glucose catabolism is only slight
5097
Rhodotorula graminis
?
-
-
-
-
Temperature Optimum [C] (protein specific)
Temperature Optimum [C]
Temperature Optimum Maximum [C]
Commentary
Organism
30
-
-
Rhodotorula graminis
Temperature Range [C] (protein specific)
Temperature Minimum [C]
Temperature Maximum [C]
Commentary
Organism
27.5
32.5
27.5C: about 70% of maximal activity, 32.5C: about 30% of maximal activity
Rhodotorula graminis
pH Optimum (protein specific)
pH Optimum Minimum
pH Optimum Maximum
Commentary
Organism
6
-
-
Rhodotorula graminis
pH Range (protein specific)
pH Minimum
pH Maximum
Commentary
Organism
5.5
7
about 40% of maximal activity at pH 5.5 and at pH 7.0
Rhodotorula graminis
Other publictions for EC 4.1.2.9
No.
1st author
Pub Med
title
organims
journal
volume
pages
year
Activating Compound
Application
Cloned(Commentary)
Crystallization (Commentary)
Engineering
General Stability
Inhibitors
KM Value [mM]
Localization
Metals/Ions
Molecular Weight [Da]
Natural Substrates/ Products (Substrates)
Organic Solvent Stability
Organism
Oxidation Stability
Posttranslational Modification
Purification (Commentary)
Reaction
Renatured (Commentary)
Source Tissue
Specific Activity [micromol/min/mg]
Storage Stability
Substrates and Products (Substrate)
Subunits
Temperature Optimum [C]
Temperature Range [C]
Temperature Stability [C]
Turnover Number [1/s]
pH Optimum
pH Range
pH Stability
Cofactor
Ki Value [mM]
pI Value
IC50 Value
Activating Compound (protein specific)
Application (protein specific)
Cloned(Commentary) (protein specific)
Cofactor (protein specific)
Crystallization (Commentary) (protein specific)
Engineering (protein specific)
General Stability (protein specific)
IC50 Value (protein specific)
Inhibitors (protein specific)
Ki Value [mM] (protein specific)
KM Value [mM] (protein specific)
Localization (protein specific)
Metals/Ions (protein specific)
Molecular Weight [Da] (protein specific)
Natural Substrates/ Products (Substrates) (protein specific)
Organic Solvent Stability (protein specific)
Oxidation Stability (protein specific)
Posttranslational Modification (protein specific)
Purification (Commentary) (protein specific)
Renatured (Commentary) (protein specific)
Source Tissue (protein specific)
Specific Activity [micromol/min/mg] (protein specific)
Storage Stability (protein specific)
Substrates and Products (Substrate) (protein specific)
Subunits (protein specific)
Temperature Optimum [C] (protein specific)
Temperature Range [C] (protein specific)
Temperature Stability [C] (protein specific)
Turnover Number [1/s] (protein specific)
pH Optimum (protein specific)
pH Range (protein specific)
pH Stability (protein specific)
pI Value (protein specific)
Expression
General Information
General Information (protein specific)
Expression (protein specific)
KCat/KM [mM/s]
KCat/KM [mM/s] (protein specific)
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1
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2
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4
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4
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1
1
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746713
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6
6
-
-
-
-
-
-
-
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-
8
-
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7
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7
7
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7
-
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-
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-
-
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-
6
7
-
-
-
746769
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-
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7
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1
1
-
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-
747624
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36
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-
1
1
-
-
-
-
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2
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4
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1
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4
-
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748374
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Relationships between the use ...
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53
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2015
-
-
-
-
-
-
-
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6
-
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4
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4
-
-
-
-
-
-
-
-
-
-
1
2
-
-
-
748611
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-
-
-
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-
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3
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2
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1
1
-
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748753
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Synechocystis sp. PCC 6803
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15187
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-
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4
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2
2
-
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-
746881
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98
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2014
-
-
3
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-
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-
6
-
-
-
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5
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3
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10
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6
-
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3
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3
3
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6
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3
-
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-
-
10
-
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-
6
-
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-
6
6
746964
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447
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1
1
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3
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1
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1
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1
1
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727211
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110
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-
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1
-
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4
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726765
Papini
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Appl. Microbiol. Biotechnol.
95
1001-1010
2012
-
1
1
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4
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727761
Liu
Phosphoketolase pathway for xy ...
Clostridium acetobutylicum, Clostridium acetobutylicum DSM 792
J. Bacteriol.
194
5413-5422
2012
-
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5
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1
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1
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2
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1
1
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728072
Servinsky
Arabinose is metabolized via a ...
Clostridium acetobutylicum, Clostridium acetobutylicum DSM 792
J. Ind. Microbiol. Biotechnol.
39
1859-1867
2012
-
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5
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2
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4
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1
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1
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726756
Shinkawa
Improved homo L-lactic acid fe ...
Lactococcus lactis
Appl. Microbiol. Biotechnol.
91
1537-1544
2011
-
1
1
-
-
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-
-
-
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-
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3
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1
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1
1
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713647
Petrareanu
Preliminary X-ray crystallogra ...
Lactococcus lactis, Lactococcus lactis IL 1403
Acta Crystallogr. Sect. F
66
805-807
2010
-
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1
1
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1
1
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4
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1
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8
1
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1
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1
1
1
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1
1
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1
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8
1
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715965
Sanchez
Bacterial and eukaryotic phosp ...
Lactobacillus plantarum
J. Mol. Microbiol. Biotechnol.
18
37-51
2010
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Fibrobacter intestinalis, Fibrobacter succinogenes
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Levels of enzymes of the pento ...
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37324
Ratledge
-
Properties of a pentulose-5-ph ...
Candida boidinii, Cutaneotrichosporon curvatus, Debaryomyces hansenii, Lipomyces starkeyi, Pachysolen tannophilus, Priceomyces medius, Rhodotorula glutinis, Rhodotorula toruloides, Yarrowia lipolytica
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1
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Evans
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Induction of xylulose-5-phosph ...
Candida boidinii, Candida parapsilosis, Candida parapsilosis NCYC 926, Candida tropicalis, Cutaneotrichosporon curvatus, Cutaneotrichosporon cutaneum, Cyberlindnera jadinii, Cyberlindnera saturnus, Debaryomyces robertsiae, Kluyveromyces marxianus, Kluyveromyces phaseolosporus, Kluyveromyces phaseolosporus 108, Lipomyces starkeyi, Lipomyces starkeyi 1809, Ogataea angusta, Ogataea angusta CBS 4732, Ogataea angusta NCYC 495, Pachysolen tannophilus, Pachysolen tannophilus 614, Priceomyces medius, Rhodotorula glutinis, Rhodotorula toruloides, Saccharomyces cerevisiae, Yarrowia lipolytica
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A novel pathway of glucose cat ...
no activity in Thiobacillus intermedius, no activity in Thiobacillus thioparus, Starkeya novella, Thiobacillus sp., Thiobacillus sp. A2
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Phosphoketolase in Rhodotorula ...
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Leuconostoc mesenteroides
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