Application | Comment | Organism |
---|---|---|
medicine | - |
Homo sapiens |
Cloned (Comment) | Organism |
---|---|
gene At-cda1, located on chromosome 2 PCR amplified, cloned and sequenced, expressed in Escherichia coli BL21(D3) | Arabidopsis thaliana |
Inhibitors | Comment | Organism | Structure |
---|---|---|---|
blasticidin S | - |
Arabidopsis thaliana | |
CMP | - |
Arabidopsis thaliana | |
CMP | - |
Homo sapiens | |
CMP | - |
Saccharomyces cerevisiae | |
dCMP | - |
Arabidopsis thaliana | |
dCMP | - |
Homo sapiens | |
NH3 | - |
Arabidopsis thaliana | |
NH3 | - |
Escherichia coli | |
uridine | - |
Arabidopsis thaliana | |
uridine | - |
Escherichia coli | |
uridine | - |
Homo sapiens |
KM Value [mM] | KM Value Maximum [mM] | Substrate | Comment | Organism | Structure |
---|---|---|---|---|---|
0.06 | - |
deoxycytidine | - |
Escherichia coli | |
0.12 | - |
deoxycytidine | recombinant At-CDA1 | Arabidopsis thaliana | |
0.22 | - |
cytidine | - |
Escherichia coli | |
0.25 | - |
cytidine | - |
Escherichia coli | |
0.25 | - |
cytidine | - |
Saccharomyces cerevisiae | |
0.25 | - |
cytidine | - |
Arabidopsis thaliana |
Localization | Comment | Organism | GeneOntology No. | Textmining |
---|---|---|---|---|
cytoplasm | - |
Escherichia coli | 5737 | - |
cytoplasm | cytosol | Arabidopsis thaliana | 5737 | - |
Molecular Weight [Da] | Molecular Weight Maximum [Da] | Comment | Organism |
---|---|---|---|
31600 | - |
2 * 31600, SDS-PAGE | Arabidopsis thaliana |
32500 | - |
calculated from cDNA open reading frame | Arabidopsis thaliana |
Natural Substrates | Organism | Comment (Nat. Sub.) | Natural Products | Comment (Nat. Pro.) | Rev. | Reac. |
---|---|---|---|---|---|---|
cytidine + H2O | Haemophilus influenzae | - |
uridine + NH3 | - |
? | |
cytidine + H2O | Bacillus subtilis | - |
uridine + NH3 | - |
? | |
cytidine + H2O | Escherichia coli | - |
uridine + NH3 | - |
? | |
cytidine + H2O | Homo sapiens | - |
uridine + NH3 | - |
? | |
cytidine + H2O | Saccharomyces cerevisiae | - |
uridine + NH3 | - |
? | |
cytidine + H2O | Arabidopsis thaliana | - |
uridine + NH3 | - |
? | |
cytidine + H2O | Caenorhabditis elegans | - |
uridine + NH3 | - |
? | |
cytidine + H2O | Mycoplasma pneumoniae | - |
uridine + NH3 | - |
? | |
cytidine + H2O | Brugia pahangi | - |
uridine + NH3 | - |
? | |
cytidine + H2O | Escherichia coli BL21(D3) | - |
uridine + NH3 | - |
? |
Organism | UniProt | Comment | Textmining |
---|---|---|---|
Arabidopsis thaliana | - |
ecotype Columbia | - |
Bacillus subtilis | - |
- |
- |
Brugia pahangi | - |
- |
- |
Caenorhabditis elegans | - |
- |
- |
Escherichia coli | - |
- |
- |
Escherichia coli BL21(D3) | - |
- |
- |
Haemophilus influenzae | - |
- |
- |
Homo sapiens | - |
human | - |
Mycoplasma pneumoniae | - |
- |
- |
Saccharomyces cerevisiae | - |
- |
- |
Storage Stability | Organism |
---|---|
-20°C, 50% glycerol, very stable, litle loss of enzymatic activity after 1 year | Arabidopsis thaliana |
Substrates | Comment Substrates | Organism | Products | Comment (Products) | Rev. | Reac. |
---|---|---|---|---|---|---|
2',3'-dideoxycytidine + H2O | - |
Homo sapiens | 2',3'-dideoxyuridinel + NH3 | - |
? | |
2',3'-dideoxycytidine + H2O | selective inhibitor of HIV reverse transcriptase | Arabidopsis thaliana | 2',3'-dideoxyuridinel + NH3 | - |
? | |
5-azacytidine + H2O | - |
Escherichia coli | 5-azauridine + NH3 | - |
? | |
5-azacytidine + H2O | - |
Homo sapiens | 5-azauridine + NH3 | - |
? | |
5-azacytidine + H2O | - |
Arabidopsis thaliana | 5-azauridine + NH3 | - |
? | |
5-azacytidine + H2O | - |
Escherichia coli BL21(D3) | 5-azauridine + NH3 | - |
? | |
cytidine + H2O | - |
Haemophilus influenzae | uridine + NH3 | - |
? | |
cytidine + H2O | - |
Bacillus subtilis | uridine + NH3 | - |
? | |
cytidine + H2O | - |
Escherichia coli | uridine + NH3 | - |
? | |
cytidine + H2O | - |
Homo sapiens | uridine + NH3 | - |
? | |
cytidine + H2O | - |
Saccharomyces cerevisiae | uridine + NH3 | - |
? | |
cytidine + H2O | - |
Arabidopsis thaliana | uridine + NH3 | - |
? | |
cytidine + H2O | - |
Caenorhabditis elegans | uridine + NH3 | - |
? | |
cytidine + H2O | - |
Mycoplasma pneumoniae | uridine + NH3 | - |
? | |
cytidine + H2O | - |
Brugia pahangi | uridine + NH3 | - |
? | |
cytidine + H2O | - |
Escherichia coli BL21(D3) | uridine + NH3 | - |
? | |
cytosine arabinoside + H2O | - |
Escherichia coli | uridine arabinoside + NH3 | - |
? | |
cytosine arabinoside + H2O | - |
Homo sapiens | uridine arabinoside + NH3 | - |
? | |
cytosine arabinoside + H2O | - |
Arabidopsis thaliana | uridine arabinoside + NH3 | - |
? | |
cytosine arabinoside + H2O | - |
Escherichia coli BL21(D3) | uridine arabinoside + NH3 | - |
? | |
deoxycytidine + H2O | - |
Escherichia coli | deoxyuridine + NH3 | - |
? | |
deoxycytidine + H2O | - |
Homo sapiens | deoxyuridine + NH3 | - |
? | |
deoxycytidine + H2O | - |
Arabidopsis thaliana | deoxyuridine + NH3 | - |
? | |
deoxycytidine + H2O | - |
Escherichia coli BL21(D3) | deoxyuridine + NH3 | - |
? |
Subunits | Comment | Organism |
---|---|---|
dimer | 2 * 31600, SDS-PAGE | Arabidopsis thaliana |
tetramer | - |
Bacillus subtilis |
tetramer | - |
Homo sapiens |
pH Optimum Minimum | pH Optimum Maximum | Comment | Organism |
---|---|---|---|
7.5 | 8 | - |
Arabidopsis thaliana |
pH Minimum | pH Maximum | Comment | Organism |
---|---|---|---|
6 | 11 | - |
Arabidopsis thaliana |