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Literature summary for 3.4.22.56 extracted from

  • Li, M.; Ding, Y.; Mu, Y.; Ao, J.; Chen, X.
    Molecular cloning and characterization of caspase-3 in large yellow croaker (Pseudosciaena crocea) (2011), Fish Shellfish Immunol., 30, 910-916.
    View publication on PubMed

Cloned(Commentary)

Cloned (Comment) Organism
cloning of full-length cDNA of Lyccasp3, DNA and amino acid sequence determination and analysis, phylogenetic tree, real-time PCR expression analysis, functional recombinant expression in Escherichia coli strain BL21 (DE3) Larimichthys crocea

Organism

Organism UniProt Comment Textmining
Larimichthys crocea C6ZH48
-
-

Source Tissue

Source Tissue Comment Organism Textmining
blood
-
Larimichthys crocea
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gill
-
Larimichthys crocea
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heart
-
Larimichthys crocea
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intestine
-
Larimichthys crocea
-
kidney
-
Larimichthys crocea
-
liver
-
Larimichthys crocea
-
additional information ubiquitous, constitutive expression with varying expression levels from tissue to tissue, real-time PCR expression analysis Larimichthys crocea
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muscle
-
Larimichthys crocea
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spleen
-
Larimichthys crocea
-

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
Ac-DEVD-4-nitroanilide + H2O an artificial caspase-3 substrate Larimichthys crocea Ac-DEVD + 4-nitroaniline
-
?
Ac-IETD-4-nitroanilide + H2O an artificial caspase-8 substrate, low activity Larimichthys crocea Ac-IETD + 4-nitroaniline
-
?
Ac-LEHD-4-nitroanilide + H2O an artificial caspase-9 substrate, low activity Larimichthys crocea Ac-LEHD + 4-nitroaniline
-
?

Subunits

Subunits Comment Organism
More Lyccasp3 exhibits a conserved caspase-3 architecture including a prodomain, a large subunit and a small subunit Larimichthys crocea

Synonyms

Synonyms Comment Organism
Lyccasp3
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Larimichthys crocea

pH Optimum

pH Optimum Minimum pH Optimum Maximum Comment Organism
7.5
-
assay at Larimichthys crocea

Expression

Organism Comment Expression
Larimichthys crocea quick induction fo expression in spleen and kidney by stimulation with either poly(I:C) or inactivated trivalent bacterial vaccine up

General Information

General Information Comment Organism
evolution caspases-3 is a member of the cysteine-aspartic acid protease (caspase) family, fish caspase-3 subgroup. Lyccasp3 exhibits a conserved caspase-3 architecture including a prodomain, a large subunit and a small subunit. Several residues critical in the caspase-3 catalytic centre and binding pocket, as well as the active-site pentapeptide motif Q172ACRG176, are present in the deduced Lyccasp3 sequence, phylogenetic tree, overview Larimichthys crocea
metabolism the intrinsic apoptotic pathway, which is initiated by caspase-9 and executed by caspase-3, is activated during the immune response induced by poly(I:C) or bacterial vaccine in the fish Larimichthys crocea