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Literature summary for 3.4.21.91 extracted from

  • Li, Y.; Zhang, Z.; Phoo, W.W.; Loh, Y.R.; Li, R.; Yang, H.Y.; Jansson, A.E.; Hill, J.; Keller, T.H.; Nacro, K.; Luo, D.; Kang, C.
    Structural insights into the inhibition of Zika virus NS2B-NS3 protease by a small-molecule inhibitor (2018), Structure, 26, 555-564.e3 .
    View publication on PubMed

Crystallization (Commentary)

Crystallization (Comment) Organism
purified bZiPro (C143S)-inhibitor 5-amino-1-((4-methoxyphenyl)sulfonyl)-1H-pyrazol-3-yl benzoate complex and bZiPro (C143S)-Ac-Lys-Arg complex, X-ray diffraction structure determination and analysis at 1.90 A and 1.51 A resolution, respectively Zika virus

Protein Variants

Protein Variants Comment Organism
C143S site-directed mutagenesis, the NS2B mutant cannot form the disulfide bond between C143 residues of neighboring NS3 Zika virus

Inhibitors

Inhibitors Comment Organism Structure
5-amino-1-((4-methoxyphenyl)sulfonyl)-1H-pyrazol-3-ol
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Zika virus
5-amino-1-((4-methoxyphenyl)sulfonyl)-1H-pyrazol-3-yl benzoate the benzoyl moiety of the inhibitor forms a covalent bond with the side chain of S135. Structure and dynamics of bZiPro-inhibitor complex in solution Zika virus
additional information structural insights into the inhibition of Zika virus NS2B-NS3 protease by a small-molecule inhibitor, structure and dynamics, overview. 5-amino-1-((4-methoxyphenyl)sulfonyl)-1H-pyrazol-3-yl benzoate stabilizes the closed conformation of ZIKV protease. Upon hydrolysis in situ into two fragments, the benzoyl group of the inhibitor forms a covalent bond with the side chain of catalytic residue S135, whereas the second fragment exhibits no obvious molecular interactions with the protease, detailed mechanism of action of a covalent inhibitor. Unique adduct of the benzoyl moiety to residue S135 Zika virus

Organism

Organism UniProt Comment Textmining
Zika virus
-
-
-

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
benzoyl-Nle-Lys-Arg-Arg-7-amido-4-methylcoumarin + H2O
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Zika virus benzoyl-Nle-Lys-Arg-Arg + 7-amino-4-methylcoumarin
-
?

Subunits

Subunits Comment Organism
dimer Zika protease is able to form a dimer, and a disulfide bond between C143 residues of neighboring NS3 in the crystal is observed Zika virus

Synonyms

Synonyms Comment Organism
NS2B-NS3 protease
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Zika virus
Zika protease
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Zika virus
Zika virus NS2B-NS3 protease
-
Zika virus

Cofactor

Cofactor Comment Organism Structure
NS2B cofactor the viral protease is a two-component serine protease formed by the N-terminal part of NS3 and the cofactor region of NS2B, a membrane protein essential for the membrane location of NS3. The NS2B mutant C143S cannot form the disulfide bond between C143 residues of neighboring NS3 Zika virus

IC50 Value

IC50 Value IC50 Value Maximum Comment Organism Inhibitor Structure
0.0015
-
20xa0mM Tris pH 8.5, 10% glycerol, 0.01% Triton X-100, 37°C Zika virus 5-amino-1-((4-methoxyphenyl)sulfonyl)-1H-pyrazol-3-yl benzoate

General Information

General Information Comment Organism
additional information the viral protease is a two-component serine protease formed by the N-terminal part of NS3 and the cofactor region of NS2B, a membrane protein essential for the membrane location of NS3 Zika virus