Natural Substrates | Organism | Comment (Nat. Sub.) | Natural Products | Comment (Nat. Pro.) | Rev. | Reac. |
---|---|---|---|---|---|---|
limonene-1,2-epoxide + H2O | Rhodococcus erythropolis | part of limonene degradation pathway which allows the organism to grow on limone as sole source of carbon and energy | limonene-1,2-diol | - |
ir | |
limonene-1,2-epoxide + H2O | Rhodococcus erythropolis DCL14 | part of limonene degradation pathway which allows the organism to grow on limone as sole source of carbon and energy | limonene-1,2-diol | - |
ir |
Organism | UniProt | Comment | Textmining |
---|---|---|---|
Rhodococcus erythropolis | Q9ZAG3 | DCL14 | - |
Rhodococcus erythropolis DCL14 | Q9ZAG3 | DCL14 | - |
Substrates | Comment Substrates | Organism | Products | Comment (Products) | Rev. | Reac. |
---|---|---|---|---|---|---|
(1R,2S)-1-methylcyclohexane oxide + H2O | - |
Rhodococcus erythropolis | (1S,2S)-1-methylcyclohexane-1,2-diol | - |
ir | |
(1R,2S,4R)-limonene-1,2-epoxide + H2O | the reaction mechanism involves epoxide protonation by Asp109, nucleophilic attack by water, and abstraction of a proton from water by Asp132. The isopropenyl group plays a crucial role because it restricts the half-chair conformation to one of the two possible helicities. In this conformation, attack on the different epoxide carbons will lead to either a chair-like or a twist-boat transition state structure, the latter resulting in a higher barrier. The regioselectivity is thus governed by conformational and not electronic factors | Rhodococcus erythropolis | (1S,2S,4R)-limonene-1,2-diol | - |
ir | |
(1R,2S,4R)-limonene-1,2-epoxide + H2O | the reaction mechanism involves epoxide protonation by Asp109, nucleophilic attack by water, and abstraction of a proton from water by Asp132. The isopropenyl group plays a crucial role because it restricts the half-chair conformation to one of the two possible helicities. In this conformation, attack on the different epoxide carbons will lead to either a chair-like or a twist-boat transition state structure, the latter resulting in a higher barrier. The regioselectivity is thus governed by conformational and not electronic factors | Rhodococcus erythropolis DCL14 | (1S,2S,4R)-limonene-1,2-diol | - |
ir | |
(1R,2S,4S)-limonene-1,2-epoxide + H2O | the reaction mechanism involves epoxide protonation by Asp109, nucleophilic attack by water, and abstraction of a proton from water by Asp132. The isopropenyl group plays a crucial role because it restricts the half-chair conformation to one of the two possible helicities. In this conformation, attack on the different epoxide carbons will lead to either a chair-like or a twist-boat transition state structure, the latter resulting in a higher barrier. The regioselectivity is thus governed by conformational and not electronic factors | Rhodococcus erythropolis | (1R,2R,4S)-limonene-1,2-diol | - |
ir | |
(1R,2S,4S)-limonene-1,2-epoxide + H2O | the reaction mechanism involves epoxide protonation by Asp109, nucleophilic attack by water, and abstraction of a proton from water by Asp132. The isopropenyl group plays a crucial role because it restricts the half-chair conformation to one of the two possible helicities. In this conformation, attack on the different epoxide carbons will lead to either a chair-like or a twist-boat transition state structure, the latter resulting in a higher barrier. The regioselectivity is thus governed by conformational and not electronic factors | Rhodococcus erythropolis DCL14 | (1R,2R,4S)-limonene-1,2-diol | - |
ir | |
(1S,2R)-1-methylcyclohexane oxide + H2O | - |
Rhodococcus erythropolis | (1R,2R)-1-methylcyclohexane-1,2-diol | - |
ir | |
(1S,2R,4R)-limonene-1,2-epoxide + H2O | the reaction mechanism involves epoxide protonation by Asp109, nucleophilic attack by water, and abstraction of a proton from water by Asp132. The isopropenyl group plays a crucial role because it restricts the half-chair conformation to one of the two possible helicities. In this conformation, attack on the different epoxide carbons will lead to either a chair-like or a twist-boat transition state structure, the latter resulting in a higher barrier. The regioselectivity is thus governed by conformational and not electronic factors | Rhodococcus erythropolis | (1S,2S,4R)-limonene-1,2-diol | - |
ir | |
(1S,2R,4R)-limonene-1,2-epoxide + H2O | the reaction mechanism involves epoxide protonation by Asp109, nucleophilic attack by water, and abstraction of a proton from water by Asp132. The isopropenyl group plays a crucial role because it restricts the half-chair conformation to one of the two possible helicities. In this conformation, attack on the different epoxide carbons will lead to either a chair-like or a twist-boat transition state structure, the latter resulting in a higher barrier. The regioselectivity is thus governed by conformational and not electronic factors | Rhodococcus erythropolis DCL14 | (1S,2S,4R)-limonene-1,2-diol | - |
ir | |
(1S,2R,4S)-limonene-1,2-epoxide + H2O | the reaction mechanism involves epoxide protonation by Asp109, nucleophilic attack by water, and abstraction of a proton from water by Asp132. The isopropenyl group plays a crucial role because it restricts the half-chair conformation to one of the two possible helicities. In this conformation, attack on the different epoxide carbons will lead to either a chair-like or a twist-boat transition state structure, the latter resulting in a higher barrier. The regioselectivity is thus governed by conformational and not electronic factors | Rhodococcus erythropolis | (1R,2R,4S)-limonene-1,2-diol | - |
ir | |
limonene-1,2-epoxide + H2O | - |
Rhodococcus erythropolis | limonene-1,2-diol | - |
ir | |
limonene-1,2-epoxide + H2O | part of limonene degradation pathway which allows the organism to grow on limone as sole source of carbon and energy | Rhodococcus erythropolis | limonene-1,2-diol | - |
ir | |
limonene-1,2-epoxide + H2O | - |
Rhodococcus erythropolis DCL14 | limonene-1,2-diol | - |
ir | |
limonene-1,2-epoxide + H2O | part of limonene degradation pathway which allows the organism to grow on limone as sole source of carbon and energy | Rhodococcus erythropolis DCL14 | limonene-1,2-diol | - |
ir |