Application | Comment | Organism |
---|---|---|
drug development | the UDG from Mycobacterium smegmatis might be a useful target for inhibitor design | Mycolicibacterium smegmatis |
Inhibitors | Comment | Organism | Structure |
---|---|---|---|
UGD inhibition protein from Bacillus subtilis | phage PBS-2-encoded uracil DNA glycosylase inhibitor, UDG forms a dissociable, activity-reduced complex with the inhibitor protein Ugi in 1:1 molar stoichiometry | Mycolicibacterium smegmatis |
Molecular Weight [Da] | Molecular Weight Maximum [Da] | Comment | Organism |
---|---|---|---|
25000 | - |
x * 25000, SDS-PAGE | Mycolicibacterium smegmatis |
Natural Substrates | Organism | Comment (Nat. Sub.) | Natural Products | Comment (Nat. Pro.) | Rev. | Reac. |
---|---|---|---|---|---|---|
additional information | Mycolicibacterium smegmatis | UDG initiates uracil excision repair to safeguard the genomic integrity, mechanism, overview | ? | - |
? | |
additional information | Mycolicibacterium smegmatis SN2 | UDG initiates uracil excision repair to safeguard the genomic integrity, mechanism, overview | ? | - |
? |
Organism | UniProt | Comment | Textmining |
---|---|---|---|
Mycolicibacterium smegmatis | - |
- |
- |
Mycolicibacterium smegmatis SN2 | - |
- |
- |
Purification (Comment) | Organism |
---|---|
native enzyme 3111fold by anion exchange chromatography, gel filtration, another step of a different anion exchange chromatography, and DNA affinity and hydroxyapatatite chromatography | Mycolicibacterium smegmatis |
Specific Activity Minimum [µmol/min/mg] | Specific Activity Maximum [µmol/min/mg] | Comment | Organism |
---|---|---|---|
14000 | - |
purified native enzyme | Mycolicibacterium smegmatis |
Substrates | Comment Substrates | Organism | Products | Comment (Products) | Rev. | Reac. |
---|---|---|---|---|---|---|
additional information | UDG initiates uracil excision repair to safeguard the genomic integrity, mechanism, overview | Mycolicibacterium smegmatis | ? | - |
? | |
additional information | Mycobacterium smegmatis UDG excises uracil from different loop positions of tetraloop hairpin substrates with comparable efficiencies, substrate Escherichia coli RZ1032 dut1 ung1 genomic DNA | Mycolicibacterium smegmatis | ? | - |
? | |
additional information | UDG initiates uracil excision repair to safeguard the genomic integrity, mechanism, overview | Mycolicibacterium smegmatis SN2 | ? | - |
? | |
additional information | Mycobacterium smegmatis UDG excises uracil from different loop positions of tetraloop hairpin substrates with comparable efficiencies, substrate Escherichia coli RZ1032 dut1 ung1 genomic DNA | Mycolicibacterium smegmatis SN2 | ? | - |
? |
Subunits | Comment | Organism |
---|---|---|
? | x * 25000, SDS-PAGE | Mycolicibacterium smegmatis |
More | the initiating amino acid, formyl-methionine is cleaved from the mature UDG protein | Mycolicibacterium smegmatis |
Synonyms | Comment | Organism |
---|---|---|
uracil DNA glycosylase | - |
Mycolicibacterium smegmatis |
Temperature Optimum [°C] | Temperature Optimum Maximum [°C] | Comment | Organism |
---|---|---|---|
37 | - |
assay at | Mycolicibacterium smegmatis |
pH Optimum Minimum | pH Optimum Maximum | Comment | Organism |
---|---|---|---|
8 | - |
first optimum | Mycolicibacterium smegmatis |
8.5 | 9 | second optimum | Mycolicibacterium smegmatis |
pH Minimum | pH Maximum | Comment | Organism |
---|---|---|---|
6.5 | 9.5 | - |
Mycolicibacterium smegmatis |