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Literature summary for 3.2.1.B1 extracted from
- Optimization of Pseudoalteromonas sp. JYBCL 1 culture conditions, medium composition and extracellular beta-agarase activity (2012), Biotechnol. Bioprocess Eng., 5, 937-945 .
No PubMed abstract available
Localization
| Localization | Comment | Organism | GeneOntology No. | Textmining |
|---|---|---|---|---|
| extracellular | - |
Pseudoalteromonas sp. JYBCL 1 | - |
- |
Natural Substrates/ Products (Substrates)
| Natural Substrates | Organism | Comment (Nat. Sub.) | Natural Products | Comment (Nat. Pro.) | Rev. | Reac. |
|---|---|---|---|---|---|---|
| agarose + H2O | Pseudoalteromonas sp. JYBCL 1 | - |
neoagarohexaose + neoagarotetraose + neoagarobiose | - |
? |  |
Organism
| Organism | UniProt | Comment | Textmining |
|---|---|---|---|
| Pseudoalteromonas sp. JYBCL 1 | - |
- |
- |
Source Tissue
| Source Tissue | Comment | Organism | Textmining |
|---|---|---|---|
| culture condition:D-galactose-grown cell | - |
Pseudoalteromonas sp. JYBCL 1 | - |
| culture condition:D-xylose-grown cell | - |
Pseudoalteromonas sp. JYBCL 1 | - |
| culture condition:dextrose-grown cell | - |
Pseudoalteromonas sp. JYBCL 1 | - |
| culture condition:mannose-grown cell | - |
Pseudoalteromonas sp. JYBCL 1 | - |
Substrates and Products (Substrate)
| Substrates | Comment Substrates | Organism | Products | Comment (Products) | Rev. | Reac. |
|---|---|---|---|---|---|---|
| agarose + H2O | - |
Pseudoalteromonas sp. JYBCL 1 | neoagarohexaose + neoagarotetraose + neoagarobiose | - |
? | |
Synonyms
| Synonyms | Comment | Organism |
|---|---|---|
| extracellular beta-agarase | - |
Pseudoalteromonas sp. JYBCL 1 |
Temperature Optimum [°C]
| Temperature Optimum [°C] | Temperature Optimum Maximum [°C] | Comment | Organism |
|---|---|---|---|
| 40 | - |
- |
Pseudoalteromonas sp. JYBCL 1 |
Temperature Range [°C]
| Temperature Minimum [°C] | Temperature Maximum [°C] | Comment | Organism |
|---|---|---|---|
| 20 | 50 | about 70% activity at 20°C, about 85% activity at 30°C, 100% activity at 40°C, about 15% activity at 50°C | Pseudoalteromonas sp. JYBCL 1 |
pH Optimum
| pH Optimum Minimum | pH Optimum Maximum | Comment | Organism |
|---|---|---|---|
| 6 | - |
- |
Pseudoalteromonas sp. JYBCL 1 |
pH Range
| pH Minimum | pH Maximum | Comment | Organism |
|---|---|---|---|
| 5 | 9 | about 30% activity at pH 5.0, 100% activity at pH 6.0, about 60% activity at pH 7.0, about 45% activity at pH 8.0, about 40% activity at pH 9.0 | Pseudoalteromonas sp. JYBCL 1 |
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Release 2023.1 (January 2023)
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