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Literature summary for 3.2.1.B1 extracted from

  • Dong, J.; Hashikawa, S.; Konishi, T.; Tamaru, Y.; Araki, T.
    Cloning of the novel gene encoding beta-agarase C from a marine bacterium, Vibrio sp. strain PO-303, and characterization of the gene product (2006), Appl. Environ. Microbiol., 72, 6399-6401.
    View publication on PubMedView publication on EuropePMC
Search for more literature for 3.2.1.B1

Localization

Localization Comment Organism GeneOntology No. Textmining
extracellular
-
 Vibrio sp.
-
-

Organism

Organism UniProt Comment Textmining
Vibrio sp. Q0KKW9
-
-

Specific Activity [micromol/min/mg]

Specific Activity Minimum [µmol/min/mg] Specific Activity Maximum [µmol/min/mg] Comment Organism
329
-
-
 Vibrio sp.

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
agarose + H2O
-
 Vibrio sp. neoagarooctaose + neoagarodecaose + neoagarododecaose + neoagarotetradecaose in presence of high amount of enzyme, products are predominantly neoagarooctaose plus some neoagarohexaose and neoagarotetraose ?
additional information enzyme does not hydrolyze neoagarooctaose or smaller neoagarooligosaccharides. No substrate: kappa-carrageenan Vibrio sp. ?
-
 ?
neoagarodecaose + H2O enzyme attacks preferentially the sixth linkage and subsequently the eighth linkage from the non-reducing end of neoagarodecaose Vibrio sp. neoagarohexaose + neoagarotetraose
-
 ?
porphyran + H2O
-
 Vibrio sp. neoagarooctaose main product, plus neoagarotetraose and neoagarohexaose ?

Synonyms

Synonyms Comment Organism
AgaC
-
 Vibrio sp.

Temperature Optimum [°C]

Temperature Optimum [°C] Temperature Optimum Maximum [°C] Comment Organism
35
-
-
 Vibrio sp.

pH Optimum

pH Optimum Minimum pH Optimum Maximum Comment Organism
6
-
-
 Vibrio sp.

pH Stability

pH Stability pH Stability Maximum Comment Organism
4 8
-
 Vibrio sp.