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BRENDA support

Literature summary for 3.2.1.81 extracted from

  • Henshaw, J.; Horne-Bitschy, A.; van Bueren, A.L.; Money, V.A.; Bolam, D.N.; Czjzek, M.; Ekborg, N.A.; Weiner, R.M.; Hutcheson, S.W.; Davies, G.J.; Boraston, A.B.; Gilbert, H.J.
    Family 6 carbohydrate binding modules in beta-agarases display exquisite selectivity for the non-reducing termini of agarose chains (2006), J. Biol. Chem., 281, 17099-17107.
    View publication on PubMed

Crystallization (Commentary)

Crystallization (Comment) Organism
carbohydrate binding module CBM6-2 of isoform Aga16B in complex with neoagarohexaose. The carbohydrate binding module targets the equatorial O4 and the axial O3 of the anhydro-L-galactose moiety Saccharophagus degradans

Organism

Organism UniProt Comment Textmining
Saccharophagus degradans
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isoforms Aga16B and Aga86E
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Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
additional information carbohydrate binding modules of both isoforms Aga16B and Aga86E bind specifically to the non-reducing end of agarose chains, recognizing only the first repeat of the dissaccharide. The carbohydrate binding module targets the equatorial O4 and the axial O3 of the anhydro-L-galactose moiety Saccharophagus degradans ?
-
?

Subunits

Subunits Comment Organism
More carbohydrate binding modules of both isoforms Aga16B and Aga86E bind specifically to the non-reducing end of agarose chains, recognizing only the first repeat of the dissaccharide Saccharophagus degradans