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Literature summary for 3.2.1.151 extracted from

  • Michailidis, G.; Argiriou, A.; Darzentas, N.; Tsaftaris, A.
    Analysis of xyloglucan endotransglycosylase/hydrolase (XTH) genes from allotetraploid (Gossypium hirsutum) cotton and its diploid progenitors expressed during fiber elongation (2009), J. Plant Physiol., 166, 403-416.
    View publication on PubMed
Search for more literature for 3.2.1.151

Cloned(Commentary)

Cloned (Comment) Organism
XTH-DNA from leaves in pCR 2.1-TOPO vector Gossypium barbadense
XTH-DNA from leaves in pCR 2.1-TOPO vector Gossypium hirsutum
XTH-DNA from leaves in pCR 2.1-TOPO vector Gossypium arboreum
XTH-DNA from leaves in pCR 2.1-TOPO vector Gossypium raimondii
XTH-DNA from leaves in pCR 2.1-TOPO vector, rolling circle amplification RACE Gossypium hirsutum

Localization

Localization Comment Organism GeneOntology No. Textmining
cell wall
-
 Gossypium barbadense 5618
-
cell wall
-
 Gossypium hirsutum 5618
-
cell wall
-
 Gossypium arboreum 5618
-
cell wall
-
 Gossypium raimondii 5618
-

Natural Substrates/ Products (Substrates)

Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
additional information Gossypium barbadense role in initiation and elongation of cotton fiber development ?
-
 ?
additional information Gossypium hirsutum role in initiation and elongation of cotton fiber development ?
-
 ?
additional information Gossypium arboreum role in initiation and elongation of cotton fiber development ?
-
 ?
additional information Gossypium raimondii role in initiation and elongation of cotton fiber development ?
-
 ?

Organism

Organism UniProt Comment Textmining
Gossypium arboreum B7SCZ6 289 amino acids, GaXTH1, similar to Gossypium hirsutum XTH1-2 gene sequence; var. 79/BH47, diploploid progenitor of Gossypium hirsutum, tree cotton
-
Gossypium barbadense
-
 Giza7 (long fibers, 1.8fold higher XTH expression than in Gossypium hirsutum Acala SJ2), sea-island cotton/Egyptian cotton
-
Gossypium hirsutum B2KL33 289 amino acids, 1122 bp, GhXTH1-1 similar to Gossypium raimondii genomic sequence, expressed in Gossypium hirsutum fibers, during early stages of fiber elongation of cotton fibers gene and expression levels vary among cultivars differing in fiber percentage and fiber length; Acala SJ2 (38% fibers), Palmeri (20% fiber), 138F (60% fibers, 2.8fold higher XTH-expression than in Acala SJ2), and PI529989 (71% fiber), allotetraploid cotton from progenitors Gossypium raimondii and Gossypium arboreum, upland cotton
-
Gossypium hirsutum B2KL34 289 amino acids, 1122 bp, GhXTH1-2 similar to Gossypium arboreum genomic sequence, sequenced but not expressed in Gossypium hirsutum fibers; Acala SJ2 (38% fibers), Palmeri (20% fiber), 138F (60% fibers, 2.8fold higher XTH-expression than in Acala SJ2), and PI529989 (71% fiber), allotetraploid cotton from progenitors Gossypium raimondii and Gossypium arboreum, upland cotton
-
Gossypium hirsutum Q7Y252 289 amino acids, 1268 bp full length XTH cDNA of Gossypium hirsutum, amino acid sequence identical to earlier deposited full length cotton XTH cDNA coding region but 5' and 3' regions differ; Acala SJ2 (38% fibers), Palmeri (20% fiber), 138F (60% fibers, 2.8fold higher XTH-expression than in Acala SJ2), and PI529989 (71% fiber), allotetraploid cotton from progenitors Gossypium raimondii and Gossypium arboreum, upland cotton
-
Gossypium raimondii B7SCZ7 289 amino acids, GrXTH1, similar to Gossypium hirsutum gene sequence GhXTH1-1; var. Ulbrich, diploploid progenitor of Gossypium hirsutum, New World cotton
-

Source Tissue

Source Tissue Comment Organism Textmining
fiber no transcripts found in leaves, petals, sepals, and cotyledons Gossypium hirsutum
-
fiber no transcripts found in leaves, petals, sepals, and cotyledons Gossypium arboreum
-
fiber no transcripts found in leaves, petals, sepals, and cotyledons Gossypium raimondii
-
fiber no XTH transcripts found in leaves, petals, sepals, and cotyledons Gossypium barbadense
-

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
additional information role in initiation and elongation of cotton fiber development Gossypium barbadense ?
-
 ?
additional information role in initiation and elongation of cotton fiber development Gossypium hirsutum ?
-
 ?
additional information role in initiation and elongation of cotton fiber development Gossypium arboreum ?
-
 ?
additional information role in initiation and elongation of cotton fiber development Gossypium raimondii ?
-
 ?

Synonyms

Synonyms Comment Organism
XTH
-
 Gossypium barbadense
XTH
-
 Gossypium hirsutum
XTH
-
 Gossypium arboreum
XTH
-
 Gossypium raimondii
xyloglucan endotransglycosylase/hydrolase
-
 Gossypium barbadense
xyloglucan endotransglycosylase/hydrolase
-
 Gossypium hirsutum
xyloglucan endotransglycosylase/hydrolase
-
 Gossypium arboreum
xyloglucan endotransglycosylase/hydrolase
-
 Gossypium raimondii