BRENDA - Enzyme Database
show all sequences of 3.1.6.20

Novel genes coding for lithotrophic sulfur oxidation of Paracoccus pantotrophus GB17

Friedrich, C.G.; Quentmeier, A.; Bardischewsky, F.; Rother, D.; Kraft, R.; Kostka, S.; Prinz, H.; J. Bacteriol. 182, 4677-4687 (2000)

Data extracted from this reference:

Metals/Ions
Metals/Ions
Commentary
Organism
Structure
Mn2+
contains 1.75 atoms of Mn per mol enzyme
Paracoccus pantotrophus
Natural Substrates/ Products (Substrates)
Natural Substrates
Organism
Commentary (Nat. Sub.)
Natural Products
Commentary (Nat. Pro.)
Organism (Nat. Pro.)
Reversibility
[SoxYZ protein]-S-(2-sulfodisulfanyl)-L-cysteine + H2O
Paracoccus pantotrophus
-
[SoxYZ protein]-S-disulfanyl-L-cysteine + sulfate
-
-
?
[SoxYZ protein]-S-(2-sulfodisulfanyl)-L-cysteine + H2O
Paracoccus pantotrophus GB17
-
[SoxYZ protein]-S-disulfanyl-L-cysteine + sulfate
-
-
?
[SoxYZ protein]-S-sulfosulfanyl-L-cysteine + H2O
Paracoccus pantotrophus
-
[SoxYZ protein]-S-sulfanyl-L-cysteine + sulfate
-
-
?
[SoxYZ protein]-S-sulfosulfanyl-L-cysteine + H2O
Paracoccus pantotrophus GB17
-
[SoxYZ protein]-S-sulfanyl-L-cysteine + sulfate
-
-
?
Organism
Organism
Primary Accession No. (UniProt)
Commentary
Textmining
Paracoccus pantotrophus
-
-
-
Paracoccus pantotrophus GB17
-
-
-
Purification (Commentary)
Commentary
Organism
Q Sepharose column chromatography, phenyl Sepharose column chromatography, and Sephacryl S-200 gel filtration
Paracoccus pantotrophus
Substrates and Products (Substrate)
Substrates
Commentary Substrates
Literature (Substrates)
Organism
Products
Commentary (Products)
Literature (Products)
Organism (Products)
Reversibility
horse heart cytochrome c + sulfide
-
748074
Paracoccus pantotrophus
?
-
-
-
?
horse heart cytochrome c + sulfide
-
748074
Paracoccus pantotrophus GB17
?
-
-
-
?
horse heart cytochrome c + thiosulfate
-
748074
Paracoccus pantotrophus
?
-
-
-
?
horse heart cytochrome c + thiosulfate
-
748074
Paracoccus pantotrophus GB17
?
-
-
-
?
[SoxYZ protein]-S-(2-sulfodisulfanyl)-L-cysteine + H2O
-
748074
Paracoccus pantotrophus
[SoxYZ protein]-S-disulfanyl-L-cysteine + sulfate
-
-
-
?
[SoxYZ protein]-S-(2-sulfodisulfanyl)-L-cysteine + H2O
-
748074
Paracoccus pantotrophus GB17
[SoxYZ protein]-S-disulfanyl-L-cysteine + sulfate
-
-
-
?
[SoxYZ protein]-S-sulfosulfanyl-L-cysteine + H2O
-
748074
Paracoccus pantotrophus
[SoxYZ protein]-S-sulfanyl-L-cysteine + sulfate
-
-
-
?
[SoxYZ protein]-S-sulfosulfanyl-L-cysteine + H2O
-
748074
Paracoccus pantotrophus GB17
[SoxYZ protein]-S-sulfanyl-L-cysteine + sulfate
-
-
-
?
Subunits
Subunits
Commentary
Organism
?
x * 58786, calculated from amino acid sequence; x * 58813, electrospray ionization mass spectroscopy; x * 59000, SDS-PAGE
Paracoccus pantotrophus
Metals/Ions (protein specific)
Metals/Ions
Commentary
Organism
Structure
Mn2+
contains 1.75 atoms of Mn per mol enzyme
Paracoccus pantotrophus
Natural Substrates/ Products (Substrates) (protein specific)
Natural Substrates
Organism
Commentary (Nat. Sub.)
Natural Products
Commentary (Nat. Pro.)
Organism (Nat. Pro.)
Reversibility
[SoxYZ protein]-S-(2-sulfodisulfanyl)-L-cysteine + H2O
Paracoccus pantotrophus
-
[SoxYZ protein]-S-disulfanyl-L-cysteine + sulfate
-
-
?
[SoxYZ protein]-S-(2-sulfodisulfanyl)-L-cysteine + H2O
Paracoccus pantotrophus GB17
-
[SoxYZ protein]-S-disulfanyl-L-cysteine + sulfate
-
-
?
[SoxYZ protein]-S-sulfosulfanyl-L-cysteine + H2O
Paracoccus pantotrophus
-
[SoxYZ protein]-S-sulfanyl-L-cysteine + sulfate
-
-
?
[SoxYZ protein]-S-sulfosulfanyl-L-cysteine + H2O
Paracoccus pantotrophus GB17
-
[SoxYZ protein]-S-sulfanyl-L-cysteine + sulfate
-
-
?
Purification (Commentary) (protein specific)
Commentary
Organism
Q Sepharose column chromatography, phenyl Sepharose column chromatography, and Sephacryl S-200 gel filtration
Paracoccus pantotrophus
Substrates and Products (Substrate) (protein specific)
Substrates
Commentary Substrates
Literature (Substrates)
Organism
Products
Commentary (Products)
Literature (Products)
Organism (Products)
Reversibility
horse heart cytochrome c + sulfide
-
748074
Paracoccus pantotrophus
?
-
-
-
?
horse heart cytochrome c + sulfide
-
748074
Paracoccus pantotrophus GB17
?
-
-
-
?
horse heart cytochrome c + thiosulfate
-
748074
Paracoccus pantotrophus
?
-
-
-
?
horse heart cytochrome c + thiosulfate
-
748074
Paracoccus pantotrophus GB17
?
-
-
-
?
[SoxYZ protein]-S-(2-sulfodisulfanyl)-L-cysteine + H2O
-
748074
Paracoccus pantotrophus
[SoxYZ protein]-S-disulfanyl-L-cysteine + sulfate
-
-
-
?
[SoxYZ protein]-S-(2-sulfodisulfanyl)-L-cysteine + H2O
-
748074
Paracoccus pantotrophus GB17
[SoxYZ protein]-S-disulfanyl-L-cysteine + sulfate
-
-
-
?
[SoxYZ protein]-S-sulfosulfanyl-L-cysteine + H2O
-
748074
Paracoccus pantotrophus
[SoxYZ protein]-S-sulfanyl-L-cysteine + sulfate
-
-
-
?
[SoxYZ protein]-S-sulfosulfanyl-L-cysteine + H2O
-
748074
Paracoccus pantotrophus GB17
[SoxYZ protein]-S-sulfanyl-L-cysteine + sulfate
-
-
-
?
Subunits (protein specific)
Subunits
Commentary
Organism
?
x * 58786, calculated from amino acid sequence; x * 58813, electrospray ionization mass spectroscopy; x * 59000, SDS-PAGE
Paracoccus pantotrophus
Other publictions for EC 3.1.6.20
No.
1st author
Pub Med
title
organims
journal
volume
pages
year
Activating Compound
Application
Cloned(Commentary)
Crystallization (Commentary)
Engineering
General Stability
Inhibitors
KM Value [mM]
Localization
Metals/Ions
Molecular Weight [Da]
Natural Substrates/ Products (Substrates)
Organic Solvent Stability
Organism
Oxidation Stability
Posttranslational Modification
Purification (Commentary)
Reaction
Renatured (Commentary)
Source Tissue
Specific Activity [micromol/min/mg]
Storage Stability
Substrates and Products (Substrate)
Subunits
Temperature Optimum [°C]
Temperature Range [°C]
Temperature Stability [°C]
Turnover Number [1/s]
pH Optimum
pH Range
pH Stability
Cofactor
Ki Value [mM]
pI Value
IC50 Value
Activating Compound (protein specific)
Application (protein specific)
Cloned(Commentary) (protein specific)
Cofactor (protein specific)
Crystallization (Commentary) (protein specific)
Engineering (protein specific)
General Stability (protein specific)
IC50 Value (protein specific)
Inhibitors (protein specific)
Ki Value [mM] (protein specific)
KM Value [mM] (protein specific)
Localization (protein specific)
Metals/Ions (protein specific)
Molecular Weight [Da] (protein specific)
Natural Substrates/ Products (Substrates) (protein specific)
Organic Solvent Stability (protein specific)
Oxidation Stability (protein specific)
Posttranslational Modification (protein specific)
Purification (Commentary) (protein specific)
Renatured (Commentary) (protein specific)
Source Tissue (protein specific)
Specific Activity [micromol/min/mg] (protein specific)
Storage Stability (protein specific)
Substrates and Products (Substrate) (protein specific)
Subunits (protein specific)
Temperature Optimum [°C] (protein specific)
Temperature Range [°C] (protein specific)
Temperature Stability [°C] (protein specific)
Turnover Number [1/s] (protein specific)
pH Optimum (protein specific)
pH Range (protein specific)
pH Stability (protein specific)
pI Value (protein specific)
Expression
General Information
General Information (protein specific)
Expression (protein specific)
KCat/KM [mM/s]
KCat/KM [mM/s] (protein specific)
749103
Grabarczyk
Intermediates in the Sox sulf ...
Thermus thermophilus
PLoS ONE
12
e0173395
2017
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1
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2
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746822
Alam
Kinetic enrichment of 34S dur ...
Advenella kashmirensis, Hydrogenovibrio crunogenus, Paracoccus pantotrophus
Appl. Environ. Microbiol.
79
4455-4464
2013
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6
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3
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6
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6
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6
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747789
Tourova
Analysis of community composi ...
Ectothiorhodosinus mongolicus, Halothiobacillus sp., Roseinatronobacter thiooxidans, Thioalkalibacter halophilus, Thioalkalivibrio denitrificans, Thioalkalivibrio halophilus, Thioalkalivibrio jannaschii, Thioalkalivibrio nitratireducens, Thioalkalivibrio nitratis, Thioalkalivibrio paradoxus, Thioalkalivibrio thiocyanoxidans, Thioalkalivibrio versutus, Thiohalobacter thiocyanaticus, Thiohalomonas denitrificans, Thiohalophilus thiocyanatoxydans, Thiohalorhabdus denitrificans
FEMS Microbiol. Ecol.
84
280-289
2013
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16
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746902
Krishnani
-
Abundance of sulphur-oxidizin ...
uncultured bacterium
Aquac. Res.
41
1290-1301
2010
-
1
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2
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1
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748163
Sauve
Mechanism for the hydrolysis ...
Thermus thermophilus
J. Biol. Chem.
284
21707-21718
2009
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1
1
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1
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1
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748677
Hensen
Thiosulphate oxidation in the ...
Allochromatium vinosum, Allochromatium vinosum DSM180T
Mol. Microbiol.
62
794-810
2006
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-
1
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1
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4
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2
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1
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1
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1
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746959
Bagchi
A structural study towards th ...
Paracoccus pantotrophus
Biochem. Biophys. Res. Commun.
335
609-615
2005
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748239
Epel
Multifrequency EPR analysis o ...
Paracoccus pantotrophus
J. Biol. Inorg. Chem.
10
636-642
2005
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2
1
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746958
Quentmeier
Sulfur oxidation in Paracoccu ...
Paracoccus pantotrophus
Biochem. Biophys. Res. Commun.
312
1011-1018
2003
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1
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1
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2
1
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744086
Friedrich
Oxidation of reduced inorgani ...
Paracoccus pantotrophus
Appl. Environ. Microbiol.
67
2873-2882
2001
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1
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1
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747757
Quentmeier
The cysteine residue of the S ...
Paracoccus pantotrophus, Paracoccus pantotrophus GB17
FEBS Lett.
503
168-172
2001
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747793
Petri
Phylogeny and distribution of ...
Aquifex aeolicus, Chlorobaculum tepidum, Chlorobaculum tepidum ATCC 49652, Chlorobaculum thiosulfatiphilum, Chlorobaculum thiosulfatiphilum DSM 249T, Chlorobium vibrioforme f. thiosulfatophilum, Chlorobium vibrioforme f. thiosulfatophilum DSM 265, Guyparkeria hydrothermalis, Guyparkeria hydrothermalis DSM 7121, Halothiobacillus neapolitanus, Halothiobacillus neapolitanus DSM 581T, Hydrogenovibrio crunogenus, Hydrogenovibrio crunogenus HY-62, K-proteobacterium HY-103, Marinobacter sp., Marinobacter sp. DS 40M8, Marinobacter sp. HY-106, Paracoccus pantotrophus, Paracoccus pantotrophus GB 17, Paracoccus versutus, Paracoccus versutus DSM 582T, Pelodictyon phaeoclathratiforme, Pelodictyon phaeoclathratiforme DSM 5477, Rhodopseudomonas palustris, Rhodopseudomonas palustris CGA 009, Starkeya novella, Starkeya novella DSM 506T, Thiobacillus thioparus, Thiobacillus thioparus DSM 505T
FEMS Microbiol. Lett.
197
171-178
2001
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748074
Friedrich
Novel genes coding for lithot ...
Paracoccus pantotrophus, Paracoccus pantotrophus GB17
J. Bacteriol.
182
4677-4687
2000
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748061
Wodara
Identification and sequence a ...
Paracoccus denitrificans, Paracoccus denitrificans GB17
J. Bacteriol.
176
6188-6191
1994
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