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Literature summary for 3.1.4.3 extracted from
- Structural, expression and evolutionary analysis of the non-specific phospholipase C gene family in Gossypium hirsutum (2017), BMC Genomics, 18, 979 .
Natural Substrates/ Products (Substrates)
| Natural Substrates | Organism | Comment (Nat. Sub.) | Natural Products | Comment (Nat. Pro.) | Rev. | Reac. |
|---|---|---|---|---|---|---|
| phosphatidylcholine + H2O | Gossypium hirsutum | - |
1,2-diacyl-sn-glycerol + phosphorylcholine | - |
? |  |
Organism
| Organism | UniProt | Comment | Textmining |
|---|---|---|---|
| Gossypium hirsutum | - |
cultivar Zhong9807 | - |
Source Tissue
| Source Tissue | Comment | Organism | Textmining |
|---|---|---|---|
| bract | isoforms NPC1a, NPC1b, NPC4 and NPC6, expanded leaf | Gossypium hirsutum | - |
| cotyledon | isoforms NPC1a, NPC1b, NPC4 and NPC6, expanded leaf | Gossypium hirsutum | - |
| leaf | isoforms NPC1a, NPC1b, NPC4 and NPC6, expanded leaf | Gossypium hirsutum | - |
| petal | isoforms NPC2b, NPC4, NPC1a, NPC1b and NPC6 | Gossypium hirsutum | - |
| plant ovule | isoforms NPC2a, NPC4, NPC1a, NPC1b and NPC6 | Gossypium hirsutum | - |
| root | isoforms NPC3a, NPC3b NPC4, NPC1a, NPC1b and NPC6 | Gossypium hirsutum | - |
| senescent leaf | isoforms NPC1a, NPC1b, NPC4 and NPC6, expanded leaf | Gossypium hirsutum | - |
| shoot tip | isoforms NPC1a, NPC1b, NPC4 and NPC6, expanded leaf | Gossypium hirsutum | - |
| stem | isoforms NPC1a, NPC1b, NPC4 and NPC6, expanded leaf | Gossypium hirsutum | - |
| taproot | isoforms NPC2a, NPC2b, NPC4, NPC1a, NPC1b and NPC6 | Gossypium hirsutum | - |
Substrates and Products (Substrate)
| Substrates | Comment Substrates | Organism | Products | Comment (Products) | Rev. | Reac. |
|---|---|---|---|---|---|---|
| phosphatidylcholine + H2O | - |
Gossypium hirsutum | 1,2-diacyl-sn-glycerol + phosphorylcholine | - |
? | |
Subunits
| Subunits | Comment | Organism |
|---|---|---|
| ? | x * 34640, isoform NPC3b, calculated from amino acid sequence | Gossypium hirsutum |
| ? | x * 54510, isoform NPC1b, calculated from amino acid sequence | Gossypium hirsutum |
| ? | x * 54520, isoform NPC1a, calculated from amino acid sequence | Gossypium hirsutum |
| ? | x * 56640, isoform NPC6c, calculated from amino acid sequence | Gossypium hirsutum |
| ? | x * 56800, isoform NPC6d, calculated from amino acid sequence | Gossypium hirsutum |
| ? | x * 56960, isoform NPC3a, calculated from amino acid sequence | Gossypium hirsutum |
| ? | x * 58040, isoform NPC6a, calculated from amino acid sequence | Gossypium hirsutum |
| ? | x * 58130, isoform NPC2b, calculated from amino acid sequence | Gossypium hirsutum |
| ? | x * 58170, isoform NPC6b, calculated from amino acid sequence | Gossypium hirsutum |
| ? | x * 58710, isoform NPC2a, calculated from amino acid sequence | Gossypium hirsutum |
| ? | x * 63800, isoform NPC4, calculated from amino acid sequence | Gossypium hirsutum |
Synonyms
| Synonyms | Comment | Organism |
|---|---|---|
| non-specific phospholipase C | - |
Gossypium hirsutum |
| NPC1a | isoform | Gossypium hirsutum |
| NPC1b | isoform | Gossypium hirsutum |
| NPC2a | isoform | Gossypium hirsutum |
| NPC2b | isoform | Gossypium hirsutum |
| NPC3a | isoform | Gossypium hirsutum |
| NPC3b | isoform | Gossypium hirsutum |
| NPC4 | isoform | Gossypium hirsutum |
| NPC6a | isoform | Gossypium hirsutum |
| NPC6b | isoform | Gossypium hirsutum |
| NPC6c | isoform | Gossypium hirsutum |
| NPC6d | isoform | Gossypium hirsutum |
pI Value
| Organism | Comment | pI Value Maximum | pI Value |
|---|---|---|---|
| Gossypium hirsutum | isoform NPC3a, calculated from amino acid sequence | - |
5.2 |
| Gossypium hirsutum | isoform NPC3b, calculated from amino acid sequence | - |
5.8 |
| Gossypium hirsutum | isoform NPC1a, calculated from amino acid sequence | - |
6.4 |
| Gossypium hirsutum | isoform NPC1b, calculated from amino acid sequence | - |
6.4 |
| Gossypium hirsutum | isoform NPC2a, calculated from amino acid sequence | - |
6.4 |
| Gossypium hirsutum | isoform NPC4, calculated from amino acid sequence | - |
6.4 |
| Gossypium hirsutum | isoform NPC2b, calculated from amino acid sequence | - |
6.5 |
| Gossypium hirsutum | isoform NPC6a, calculated from amino acid sequence | - |
6.7 |
| Gossypium hirsutum | isoform NPC6c, calculated from amino acid sequence | - |
6.7 |
| Gossypium hirsutum | isoform NPC6d, calculated from amino acid sequence | - |
6.7 |
| Gossypium hirsutum | isoform NPC6b, calculated from amino acid sequence | - |
6.8 |
Expression
| Organism | Comment | Expression |
|---|---|---|
| Gossypium hirsutum | under abscisic acid treatment, isoforms NPC1b, NPC6a and NPC6b are down-regulated. Isoforms NPC2a, NPC2b, NPC6a, NPC6b, NPC6c and NPC6d are down-regulated under the treatments of low-phosphate and salt. Isoforms NPC3a and GhNPC3b are both down-regulated under salt treatment. Expression of isoform NPC4 is down-regulated under drought treatment | down |
| Gossypium hirsutum | isoforms NPC1a and NPC1b are up-regulated under the treatments of low-phosphate and salt, up-regulated at 1 h and 2 h but then down-regulated under the drought treatment. Under abscisic acid treatment, isoforms NPC1a, NPC2a, NPC2b, NPC3a and NPC3b are up-regulated. Expression of isoforms NPC4, NPC6a and NPC6b is up-regulated under salt treatment. Isoforms NPC6a, NPC6b, NPC6c, and NPC6d are up-regulated at the beginning but then down-regulated under drought treatment | up |
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