BRENDA - Enzyme Database show
show all sequences of 3.1.3.24

Differential regulation of grain sucrose accumulation and metabolism in Coffea arabica (Arabica) and Coffea canephora (Robusta) revealed through gene expression and enzyme activity analysis

Privat, I.; Foucrier, S.; Prins, A.; Epalle, T.; Eychenne, M.; Kandalaft, L.; Caillet, V.; Lin, C.; Tanksley, S.; Foyer, C.; McCarthy, J.; New Phytol. 178, 781-797 (2008)

Data extracted from this reference:

Molecular Weight [Da]
Molecular Weight [Da]
Molecular Weight Maximum [Da]
Commentary
Organism
46700
-
deduced from sequence
Coffea arabica
46700
-
deduced from sequence
Coffea canephora
Organism
Organism
Primary Accession No. (UniProt)
Commentary
Textmining
Coffea arabica
-
cv. Caturra, CCCA02 and CCCA12
-
Coffea canephora
A7IZK6
var. robusta FRT64 and FRT05
-
Source Tissue
Source Tissue
Commentary
Organism
Textmining
fruit
mRNA expression in, advanced stages of grain development
Coffea arabica
-
fruit
mRNA expression in, advanced stages of grain development
Coffea canephora
-
leaf
mRNA expression in
Coffea arabica
-
leaf
mRNA expression in
Coffea canephora
-
Specific Activity [micromol/min/mg]
Specific Activity Minimum [µmol/min/mg]
Specific Activity Maximum [µmol/min/mg]
Commentary
Organism
additional information
-
mRNA abundance of the sucrose metabolism enzymes compared in Coffea arabica and robusta that are characterized by different sucrose contents in mature grain, expression of CcSP1 stronger in Coffea arabica than in Coffea robusta during advanced stages of grain development
Coffea arabica
additional information
-
mRNA abundance of the sucrose metabolism enzymes compared at different developmental stages in Coffea arabica and robusta grains that are characterized by different sucrose contents in mature grain, Coffea robusta accumulates less sucrose than Coffea arabica, Coffea robusta has a low CcSPS1 expression at the final stages of grain development, less capacity for sucrose re-synthesis
Coffea canephora
Substrates and Products (Substrate)
Substrates
Commentary Substrates
Literature (Substrates)
Organism
Products
Commentary (Products)
Literature (Products)
Organism (Products)
Reversibility
additional information
analysis of gene expression patterns that support sucrose accumulation during grain maturation
694409
Coffea arabica
?
-
-
-
-
additional information
analysis of gene expression patterns that support sucrose accumulation during grain maturation
694409
Coffea canephora
?
-
-
-
-
Molecular Weight [Da] (protein specific)
Molecular Weight [Da]
Molecular Weight Maximum [Da]
Commentary
Organism
46700
-
deduced from sequence
Coffea arabica
46700
-
deduced from sequence
Coffea canephora
Source Tissue (protein specific)
Source Tissue
Commentary
Organism
Textmining
fruit
mRNA expression in, advanced stages of grain development
Coffea arabica
-
fruit
mRNA expression in, advanced stages of grain development
Coffea canephora
-
leaf
mRNA expression in
Coffea arabica
-
leaf
mRNA expression in
Coffea canephora
-
Specific Activity [micromol/min/mg] (protein specific)
Specific Activity Minimum [µmol/min/mg]
Specific Activity Maximum [µmol/min/mg]
Commentary
Organism
additional information
-
mRNA abundance of the sucrose metabolism enzymes compared in Coffea arabica and robusta that are characterized by different sucrose contents in mature grain, expression of CcSP1 stronger in Coffea arabica than in Coffea robusta during advanced stages of grain development
Coffea arabica
additional information
-
mRNA abundance of the sucrose metabolism enzymes compared at different developmental stages in Coffea arabica and robusta grains that are characterized by different sucrose contents in mature grain, Coffea robusta accumulates less sucrose than Coffea arabica, Coffea robusta has a low CcSPS1 expression at the final stages of grain development, less capacity for sucrose re-synthesis
Coffea canephora
Substrates and Products (Substrate) (protein specific)
Substrates
Commentary Substrates
Literature (Substrates)
Organism
Products
Commentary (Products)
Literature (Products)
Organism (Products)
Reversibility
additional information
analysis of gene expression patterns that support sucrose accumulation during grain maturation
694409
Coffea arabica
?
-
-
-
-
additional information
analysis of gene expression patterns that support sucrose accumulation during grain maturation
694409
Coffea canephora
?
-
-
-
-
Other publictions for EC 3.1.3.24
No.
1st author
Pub Med
title
organims
journal
volume
pages
year
Activating Compound
Application
Cloned(Commentary)
Crystallization (Commentary)
Engineering
General Stability
Inhibitors
KM Value [mM]
Localization
Metals/Ions
Molecular Weight [Da]
Natural Substrates/ Products (Substrates)
Organic Solvent Stability
Organism
Oxidation Stability
Posttranslational Modification
Purification (Commentary)
Reaction
Renatured (Commentary)
Source Tissue
Specific Activity [micromol/min/mg]
Storage Stability
Substrates and Products (Substrate)
Subunits
Temperature Optimum [°C]
Temperature Range [°C]
Temperature Stability [°C]
Turnover Number [1/s]
pH Optimum
pH Range
pH Stability
Cofactor
Ki Value [mM]
pI Value
IC50 Value
Activating Compound (protein specific)
Application (protein specific)
Cloned(Commentary) (protein specific)
Cofactor (protein specific)
Crystallization (Commentary) (protein specific)
Engineering (protein specific)
General Stability (protein specific)
IC50 Value (protein specific)
Inhibitors (protein specific)
Ki Value [mM] (protein specific)
KM Value [mM] (protein specific)
Localization (protein specific)
Metals/Ions (protein specific)
Molecular Weight [Da] (protein specific)
Natural Substrates/ Products (Substrates) (protein specific)
Organic Solvent Stability (protein specific)
Oxidation Stability (protein specific)
Posttranslational Modification (protein specific)
Purification (Commentary) (protein specific)
Renatured (Commentary) (protein specific)
Source Tissue (protein specific)
Specific Activity [micromol/min/mg] (protein specific)
Storage Stability (protein specific)
Substrates and Products (Substrate) (protein specific)
Subunits (protein specific)
Temperature Optimum [°C] (protein specific)
Temperature Range [°C] (protein specific)
Temperature Stability [°C] (protein specific)
Turnover Number [1/s] (protein specific)
pH Optimum (protein specific)
pH Range (protein specific)
pH Stability (protein specific)
pI Value (protein specific)
Expression
General Information
General Information (protein specific)
Expression (protein specific)
KCat/KM [mM/s]
KCat/KM [mM/s] (protein specific)
751954
Albi
Characterization of the sucro ...
Arabidopsis thaliana
PLoS ONE
11
e0166308
2016
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6
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2
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2
751222
Maloney
Sucrose phosphate synthase an ...
Arabidopsis thaliana
J. Exp. Bot.
66
4383-4394
2015
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1
1
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729755
But
Bifunctional sucrose phosphate ...
Methylobacillus flagellatus
FEMS Microbiol. Lett.
347
43-51
2013
2
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6
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701824
Lee
Mannheimia succiniciproducens ...
Mannheimia succiniciproducens
Appl. Environ. Microbiol.
76
1699-1703
2010
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706394
Aleman
Nodule-enhanced expression of ...
Medicago sativa
Planta
231
233-244
2010
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3
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715028
Cumino
The proteins involved in sucro ...
Synechococcus sp.
FEBS Lett.
584
4655-4660
2010
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682334
Chen
RNA interference-mediated repr ...
Solanum tuberosum
Plant Cell Environ.
31
165-176
2008
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2
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694409
Privat
Differential regulation of gra ...
Coffea arabica, Coffea canephora
New Phytol.
178
781-797
2008
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2
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5
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4
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2
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4
2
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2
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682788
Fieulaine
Crystal structure of a cyanoba ...
Synechocystis sp.
Proteins Struct. Funct. Bioinform.
68
796-801
2007
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1
1
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7
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1
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1
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1
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1
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666577
Fieulaine
The structure of a cyanobacter ...
Synechocystis sp.
Plant Cell
17
2049-2058
2005
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1
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666680
Chen
Decreased sucrose-6-phosphate ...
Nicotiana tabacum
Planta
221
479-492
2005
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1
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653571
Cumino
Sucrose-phosphate phosphatase ...
Anabaena sp.
Planta
214
250-256
2001
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1
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4
1
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2
4
1
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5
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653641
Lunn
Purification, molecular clonin ...
Oryza sativa, Zea mays
Proc. Natl. Acad. Sci. USA
97
12914-12919
2000
-
-
1
-
-
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3
1
-
2
3
1
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8
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1
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2
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4
2
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1
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1
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3
1
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2
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4
2
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114210
Echeverria
Physical and kinetic evidence ...
Oryza sativa, Spinacia oleracea
Plant Physiol.
115
223-227
1997
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1
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4
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114208
Echeverria
-
Properties of sucrose-phosphat ...
Oryza sativa
Plant Sci.
96
15-19
1994
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5
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2
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1
1
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114209
Echeverria E.; Salerno
-
Intracellular localization of ...
Lactuca sativa
Physiol. Plant.
88
434-438
1993
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1
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1
1
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114201
Hawker
Sucrose phosphatase associated ...
Beta vulgaris, Saccharum spp.
Plant Physiol.
84
1281-1285
1987
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4
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7
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2
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5
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1
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114202
Whitaker
-
Purification and properties of ...
Pisum sativum
Phytochemistry
23
2429-2430
1984
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3
1
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2
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1
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1
1
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2
1
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2
1
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114203
Hawker
-
Occurence of sucrose phosphata ...
Asclepias rotundifolia, Beta vulgaris, Bryum sp., Calotropis procera, Citrullus lanatus, Euphorbia lathyris, Funaria hygrometrica, Hordeum vulgare, Lunularia cruciata, Malus domestica, Manihot esculenta, Nephrolepis cordifolia, Nicotiana tabacum, no activity in Agaricus campestris, no activity in Asparagopsis taxiformis, no activity in Cystophora subfarcinata, no activity in Ecklonia radiata, no activity in Hormosira banksii, no activity in Saccharomyces cerevisiae, Pinus radiata, Platycladus orientalis, Pyrus communis, Ricinus communis, Secale cereale, Spinacia oleracea, Triticum aestivum, Ulva australis, Vicia faba, Vitis vinifera, Zea mays
Phytochemistry
23
245-249
1984
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50
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30
-
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18
-
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50
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18
-
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114200
Hawker
-
Sucrose-phosphate phosphohydro ...
Daucus carota, Saccharum spp.
Methods Enzymol.
42C
341-347
1975
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10
1
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3
-
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2
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1
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2
1
2
1
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1
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10
-
1
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3
-
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1
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2
1
2
1
-
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-
-
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-
1
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-
-
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114207
Downton
-
Enzymes of starch and sucrose ...
Zea mays
Phytochemistry
12
1551-1556
1973
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1
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1
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1
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-
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-
114206
Hawker
-
Enzymes concerned with sucrose ...
Ricinus communis, Saccharum spp., Vicia faba, Vitis sp., Zea mays
Phytochemistry
10
2313-2322
1971
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25
-
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2
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5
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3
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2
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25
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2
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3
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2
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114205
Hawker
Inhibition of sucrose phosphat ...
Daucus carota, Nicotiana tabacum, Saccharum robustum, Saccharum spontaneum, Saccharum spp.
Biochem. J.
102
401-406
1967
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6
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5
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1
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3
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6
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1
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3
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114204
Hawker
A specific sucrose phosphatase ...
Avena sativa, Daucus carota, Hordeum vulgare, Pastinaca sativa, Pisum sativum, Saccharum spp., Solanum tuberosum
Biochem. J.
99
102-107
1966
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18
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1
3
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8
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1
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12
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10
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3
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1
1
1
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18
-
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1
3
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1
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12
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10
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3
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1
1
1
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