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Literature summary for 3.1.26.12 extracted from
- RNase E plays an essential role in the maturation of Escherichia coli tRNA precursors (2002), RNA, 8, 97-109.
Protein Variants
| Protein Variants | Comment | Organism |
|---|---|---|
| additional information | generation of RNase E-defective mutants and of RNase E/RNase P double mutants, inactivation leads to accumulation of uncleaved tRNA precursors, overview | Escherichia coli K-12 |
Metals/Ions
| Metals/Ions | Comment | Organism | Structure |
|---|---|---|---|
| Mg2+ | - |
Escherichia coli K-12 |  |
Natural Substrates/ Products (Substrates)
| Natural Substrates | Organism | Comment (Nat. Sub.) | Natural Products | Comment (Nat. Pro.) | Rev. | Reac. |
|---|---|---|---|---|---|---|
| additional information | Escherichia coli K-12 | RNase E plays an essential role in the maturation of tRNA precursors, cleavage site and maturation process modeling, overview | ? | - |
? | |
| additional information | Escherichia coli K-12 CA244 | RNase E plays an essential role in the maturation of tRNA precursors, cleavage site and maturation process modeling, overview | ? | - |
? | |
| tRNAArgHisLeuPro precursor + H2O | Escherichia coli K-12 | polycistronic transcript, maturation, overview | tRNAArg + tRNAHis + tRNALeu + tRNAPro + ? | - |
? | |
| tRNAArgHisLeuPro precursor + H2O | Escherichia coli K-12 CA244 | polycistronic transcript, maturation, overview | tRNAArg + tRNAHis + tRNALeu + tRNAPro + ? | - |
? | |
| tRNAGlyCysLeu precursor + H2O | Escherichia coli K-12 | polycistronic transcript, maturation, cleavage downstream of each tRNA, overview | tRNAGly + tRNACys + tRNALeu + ? | - |
? | |
| tRNAGlyCysLeu precursor + H2O | Escherichia coli K-12 CA244 | polycistronic transcript, maturation, cleavage downstream of each tRNA, overview | tRNAGly + tRNACys + tRNALeu + ? | - |
? | |
| tRNATyr precursor + H2O | Escherichia coli K-12 | maturation, cleavage of the tyrT transcript, containing two tRNATyr1 sequences separated by a 209-nt spacer region plus a downstream mRNA, at three sites in the speacer region, overview | tRNATyr + ? | - |
? | |
Organism
| Organism | UniProt | Comment | Textmining |
|---|---|---|---|
| Escherichia coli K-12 | - |
gene rne | - |
| Escherichia coli K-12 CA244 | - |
gene rne | - |
Substrates and Products (Substrate)
| Substrates | Comment Substrates | Organism | Products | Comment (Products) | Rev. | Reac. |
|---|---|---|---|---|---|---|
| additional information | RNase E plays an essential role in the maturation of tRNA precursors, cleavage site and maturation process modeling, overview | Escherichia coli K-12 | ? | - |
? | |
| additional information | RNase E plays an essential role in the maturation of tRNA precursors, cleavage site and maturation process modeling, overview | Escherichia coli K-12 CA244 | ? | - |
? | |
| tRNAArgHisLeuPro precursor + H2O | polycistronic transcript, maturation, overview | Escherichia coli K-12 | tRNAArg + tRNAHis + tRNALeu + tRNAPro + ? | - |
? | |
| tRNAArgHisLeuPro precursor + H2O | polycistronic transcript, maturation | Escherichia coli K-12 | tRNAArg + tRNAHis + tRNALeu + tRNAPro + ? | - |
? | |
| tRNAArgHisLeuPro precursor + H2O | polycistronic transcript, maturation, overview | Escherichia coli K-12 CA244 | tRNAArg + tRNAHis + tRNALeu + tRNAPro + ? | - |
? | |
| tRNAArgHisLeuPro precursor + H2O | polycistronic transcript, maturation | Escherichia coli K-12 CA244 | tRNAArg + tRNAHis + tRNALeu + tRNAPro + ? | - |
? | |
| tRNAGlyCysLeu precursor + H2O | polycistronic transcript, maturation, cleavage downstream of each tRNA, overview | Escherichia coli K-12 | tRNAGly + tRNACys + tRNALeu + ? | - |
? | |
| tRNAGlyCysLeu precursor + H2O | polycistronic transcript, maturation, cleavage downstream of each tRNA | Escherichia coli K-12 | tRNAGly + tRNACys + tRNALeu + ? | - |
? | |
| tRNAGlyCysLeu precursor + H2O | polycistronic transcript, maturation, cleavage downstream of each tRNA, overview | Escherichia coli K-12 CA244 | tRNAGly + tRNACys + tRNALeu + ? | - |
? | |
| tRNAGlyCysLeu precursor + H2O | polycistronic transcript, maturation, cleavage downstream of each tRNA | Escherichia coli K-12 CA244 | tRNAGly + tRNACys + tRNALeu + ? | - |
? | |
| tRNATyr precursor + H2O | maturation, cleavage of the tyrT transcript, containing two tRNATyr1 sequences separated by a 209-nt spacer region plus a downstream mRNA, at three sites in the speacer region, overview | Escherichia coli K-12 | tRNATyr + ? | - |
? | |
| tRNATyr precursor + H2O | maturation, cleavage of the tyrT transcript, containing two tRNATyr1 sequences separated by a 209-nt spacer region plus a downstream mRNA, at three sites in the spacer region | Escherichia coli K-12 | tRNATyr + ? | - |
? | |
| tRNATyrsu3+ + H2O | a construct of 404 nucleotides containing a leader sequence and the amber suppressor form of tRNATyr | Escherichia coli K-12 | tRNATyrsu3+ + ? | - |
? | |
Synonyms
| Synonyms | Comment | Organism |
|---|---|---|
| RNase E | - |
Escherichia coli K-12 |
Temperature Optimum [°C]
| Temperature Optimum [°C] | Temperature Optimum Maximum [°C] | Comment | Organism |
|---|---|---|---|
| 30 | - |
assay at | Escherichia coli K-12 |
pH Optimum
| pH Optimum Minimum | pH Optimum Maximum | Comment | Organism |
|---|---|---|---|
| 7.5 | - |
assay at | Escherichia coli K-12 |
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