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Literature summary for 3.1.26.11 extracted from

  • Ceballos, M.; Vioque, A.
    tRNase Z (2007), Protein Pept. Lett., 14, 137-145.
    View publication on PubMed

Crystallization (Commentary)

Crystallization (Comment) Organism
crystal structure of different tRNase Z enzymes with regard to canonical sequence motifs reviewed, overview about substrate recognition and cleavage sites of tRNase Z given Bacillus subtilis
crystal structure of different tRNase Z enzymes with regard to canonical sequence motifs reviewed, overview about substrate recognition and cleavage sites of tRNase Z given Escherichia coli

Metals/Ions

Metals/Ions Comment Organism Structure
additional information metal binding sites in tRNase Z and metallo-beta-lactamases described Escherichia coli

Organism

Organism UniProt Comment Textmining
Arabidopsis thaliana
-
tRNase Z, overview
-
Bacillus subtilis
-
tRNase Z, overview
-
Escherichia coli
-
tRNase Z, overview
-
Homo sapiens
-
tRNase Z, overview
-
Methanocaldococcus jannaschii
-
tRNase Z, overview
-
Synechocystis sp.
-
PCC6803, tRNase Z, overview
-
Thermotoga maritima
-
tRNase Z, overview
-

Specific Activity [micromol/min/mg]

Specific Activity Minimum [µmol/min/mg] Specific Activity Maximum [µmol/min/mg] Comment Organism
additional information
-
in vitro processing activities of different recombinant tRNase Z enzymes with respect to CCA-containing and CCA-less pre-tRNAs reviewed Escherichia coli
additional information
-
in vitro processing activities of different recombinant tRNase Z enzymes with respect to CCA-containing and CCA-less pre-tRNAs reviewed, involvement in potential futile cycles in tRNA 3'-processing shown Bacillus subtilis

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
bis(p-nitrophenyl)phosphate + H2O bpNPP substrate, phosphodiesterase activities of tRNase Z on small chromogenic substrates mentioned, structural features of potential model substrates indicated Escherichia coli p-nitrophenol + p-nitrophenyl phosphate
-
?
thymidine-5-p-nitrophenyl phosphate + H2O TpNPP substrate, phosphodiesterase activities of tRNase Z on small chromogenic substrates mentioned, structural features of potential model substrates indicated Escherichia coli p-nitrophenol + TMP
-
?

Synonyms

Synonyms Comment Organism
tRNase Z
-
Bacillus subtilis
tRNase Z
-
Escherichia coli
tRNase Z
-
Homo sapiens
tRNase Z
-
Arabidopsis thaliana
tRNase Z
-
Methanocaldococcus jannaschii
tRNase Z
-
Synechocystis sp.
tRNase Z
-
Thermotoga maritima
Trz
-
Bacillus subtilis
Trz
-
Escherichia coli
Trz
-
Homo sapiens
Trz
-
Arabidopsis thaliana
Trz
-
Methanocaldococcus jannaschii
Trz
-
Synechocystis sp.
Trz
-
Thermotoga maritima