BRENDA - Enzyme Database
show all sequences of 2.8.3.16

Use of the frc gene as a molecular marker to characterize oxalate-oxidizing bacterial abundance and diversity structure in soil

Khammar, N.; Martin, G.; Ferro, K.; Job, D.; Aragno, M.; Verrecchia, E.; J. Microbiol. Methods 76, 120-127 (2008)

Data extracted from this reference:

Application
Application
Commentary
Organism
environmental protection
bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.
Ancylobacter oerskovii
environmental protection
bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.
Ancylobacter polymorphus
environmental protection
bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.
Arquibacter sp.
environmental protection
bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.
Azorhizobium sp.
environmental protection
bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.
Azospirillum brasilense
environmental protection
bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.
Azospirillum lipoferum
environmental protection
bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.
Bradyrhizobium japonicum
environmental protection
bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.
Bradyrhizobium sp.
environmental protection
bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.; bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.; bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.
Cupriavidus necator
environmental protection
bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.
Cupriavidus oxalaticus
environmental protection
bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.; bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.
Escherichia coli
environmental protection
bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.; bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.
Herminiimonas arsenicoxydans
environmental protection
bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.
Herminiimonas saxobsidens
environmental protection
bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.
Janthinobacterium sp. Marseille
environmental protection
bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.
Methylobacterium organophilum
environmental protection
bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.
Methylorubrum extorquens
environmental protection
bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.
Methylorubrum thiocyanatum
environmental protection
bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.
Oxalicibacterium flavum
environmental protection
bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.
Oxalobacter formigenes
environmental protection
bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.
Pandoraea sp.
environmental protection
bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.
Paraburkholderia xenovorans
environmental protection
bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.
Rhodopseudomonas palustris
environmental protection
bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.
Shigella flexneri
environmental protection
bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.
Starkeya novella
environmental protection
bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.
Streptomyces avermitilis
environmental protection
bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.
Streptomyces coelicolor
environmental protection
bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.
Streptomyces violaceoruber
environmental protection
bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.
Variovorax paradoxus
environmental protection
bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.
Xanthobacter autotrophicus
environmental protection
bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.
Xanthobacter flavus
environmental protection
bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.
Xanthomonas sp.
medicine
bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders
Ancylobacter oerskovii
medicine
bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders
Ancylobacter polymorphus
medicine
bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders
Arquibacter sp.
medicine
bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders
Azorhizobium sp.
medicine
bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders
Azospirillum brasilense
medicine
bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders
Azospirillum lipoferum
medicine
bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders
Bradyrhizobium japonicum
medicine
bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders
Bradyrhizobium sp.
medicine
bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders; bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders; bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders
Cupriavidus necator
medicine
bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders
Cupriavidus oxalaticus
medicine
bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders; bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders
Escherichia coli
medicine
bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders; bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders
Herminiimonas arsenicoxydans
medicine
bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders
Herminiimonas saxobsidens
medicine
bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders
Janthinobacterium sp. Marseille
medicine
bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders
Methylobacterium organophilum
medicine
bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders
Methylorubrum extorquens
medicine
bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders
Methylorubrum thiocyanatum
medicine
bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders
Oxalicibacterium flavum
medicine
bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders
Oxalobacter formigenes
medicine
bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders
Pandoraea sp.
medicine
bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders
Paraburkholderia xenovorans
medicine
bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders
Rhodopseudomonas palustris
medicine
bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders
Shigella flexneri
medicine
bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders
Starkeya novella
medicine
bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders
Streptomyces avermitilis
medicine
bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders
Streptomyces coelicolor
medicine
bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders
Streptomyces violaceoruber
medicine
bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders
Variovorax paradoxus
medicine
bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders
Xanthobacter autotrophicus
medicine
bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders
Xanthobacter flavus
medicine
bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders
Xanthomonas sp.
molecular biology
use of the frc gene as template for PCR to detect oxalotrophic bacteria
Ancylobacter oerskovii
molecular biology
use of the frc gene as template for PCR to detect oxalotrophic bacteria
Ancylobacter polymorphus
molecular biology
use of the frc gene as template for PCR to detect oxalotrophic bacteria
Arquibacter sp.
molecular biology
use of the frc gene as template for PCR to detect oxalotrophic bacteria
Azorhizobium sp.
molecular biology
use of the frc gene as template for PCR to detect oxalotrophic bacteria
Azospirillum brasilense
molecular biology
use of the frc gene as template for PCR to detect oxalotrophic bacteria
Azospirillum lipoferum
molecular biology
use of the frc gene as template for PCR to detect oxalotrophic bacteria
Bradyrhizobium japonicum
molecular biology
use of the frc gene as template for PCR to detect oxalotrophic bacteria
Bradyrhizobium sp.
molecular biology
use of the frc gene as template for PCR to detect oxalotrophic bacteria; use of the frc gene as template for PCR to detect oxalotrophic bacteria; use of the frc gene as template for PCR to detect oxalotrophic bacteria
Cupriavidus necator
molecular biology
use of the frc gene as template for PCR to detect oxalotrophic bacteria
Cupriavidus oxalaticus
molecular biology
use of the frc gene as template for PCR to detect oxalotrophic bacteria; use of the frc gene as template for PCR to detect oxalotrophic bacteria
Escherichia coli
molecular biology
use of the frc gene as template for PCR to detect oxalotrophic bacteria; use of the frc gene as template for PCR to detect oxalotrophic bacteria
Herminiimonas arsenicoxydans
molecular biology
use of the frc gene as template for PCR to detect oxalotrophic bacteria
Herminiimonas saxobsidens
molecular biology
use of the frc gene as template for PCR to detect oxalotrophic bacteria
Janthinobacterium sp. Marseille
molecular biology
use of the frc gene as template for PCR to detect oxalotrophic bacteria
Methylobacterium organophilum
molecular biology
use of the frc gene as template for PCR to detect oxalotrophic bacteria
Methylorubrum extorquens
molecular biology
use of the frc gene as template for PCR to detect oxalotrophic bacteria
Methylorubrum thiocyanatum
molecular biology
use of the frc gene as template for PCR to detect oxalotrophic bacteria
Oxalicibacterium flavum
molecular biology
use of the frc gene as template for PCR to detect oxalotrophic bacteria
Oxalobacter formigenes
molecular biology
use of the frc gene as template for PCR to detect oxalotrophic bacteria
Pandoraea sp.
molecular biology
use of the frc gene as template for PCR to detect oxalotrophic bacteria
Paraburkholderia xenovorans
molecular biology
use of the frc gene as template for PCR to detect oxalotrophic bacteria
Rhodopseudomonas palustris
molecular biology
use of the frc gene as template for PCR to detect oxalotrophic bacteria
Shigella flexneri
molecular biology
use of the frc gene as template for PCR to detect oxalotrophic bacteria
Starkeya novella
molecular biology
use of the frc gene as template for PCR to detect oxalotrophic bacteria
Streptomyces avermitilis
molecular biology
use of the frc gene as template for PCR to detect oxalotrophic bacteria
Streptomyces coelicolor
molecular biology
use of the frc gene as template for PCR to detect oxalotrophic bacteria
Streptomyces violaceoruber
molecular biology
use of the frc gene as template for PCR to detect oxalotrophic bacteria
Variovorax paradoxus
molecular biology
use of the frc gene as template for PCR to detect oxalotrophic bacteria
Xanthobacter autotrophicus
molecular biology
use of the frc gene as template for PCR to detect oxalotrophic bacteria
Xanthobacter flavus
molecular biology
use of the frc gene as template for PCR to detect oxalotrophic bacteria
Xanthomonas sp.
Cloned(Commentary)
Commentary
Organism
expression in Escherichia coli XL1
Ancylobacter oerskovii
expression in Escherichia coli XL1
Ancylobacter polymorphus
expression in Escherichia coli XL1
Arquibacter sp.
expression in Escherichia coli XL1
Azorhizobium sp.
expression in Escherichia coli XL1
Azospirillum brasilense
expression in Escherichia coli XL1
Azospirillum lipoferum
expression in Escherichia coli XL1
Bradyrhizobium japonicum
expression in Escherichia coli XL1
Bradyrhizobium sp.
expression in Escherichia coli XL1
Cupriavidus oxalaticus
expression in Escherichia coli XL1
Herminiimonas saxobsidens
expression in Escherichia coli XL1
Janthinobacterium sp. Marseille
expression in Escherichia coli XL1
Methylobacterium organophilum
expression in Escherichia coli XL1
Methylorubrum extorquens
expression in Escherichia coli XL1
Methylorubrum thiocyanatum
expression in Escherichia coli XL1
Oxalicibacterium flavum
expression in Escherichia coli XL1
Oxalobacter formigenes
expression in Escherichia coli XL1
Pandoraea sp.
expression in Escherichia coli XL1
Paraburkholderia xenovorans
expression in Escherichia coli XL1
Rhodopseudomonas palustris
expression in Escherichia coli XL1
Shigella flexneri
expression in Escherichia coli XL1
Starkeya novella
expression in Escherichia coli XL1
Streptomyces avermitilis
expression in Escherichia coli XL1
Streptomyces coelicolor
expression in Escherichia coli XL1
Streptomyces violaceoruber
expression in Escherichia coli XL1
Variovorax paradoxus
expression in Escherichia coli XL1
Xanthobacter autotrophicus
expression in Escherichia coli XL1
Xanthobacter flavus
expression in Escherichia coli XL1
Xanthomonas sp.
expression in Escherichia coli XL1; expression in Escherichia coli XL1
Escherichia coli
expression in Escherichia coli XL1; expression in Escherichia coli XL1
Herminiimonas arsenicoxydans
expression in Escherichia coli XL1; expression in Escherichia coli XL1; expression in Escherichia coli XL1
Cupriavidus necator
Natural Substrates/ Products (Substrates)
Natural Substrates
Organism
Commentary (Nat. Sub.)
Natural Products
Commentary (Nat. Pro.)
Organism (Nat. Pro.)
Reversibility
formyl-CoA + oxalate
Escherichia coli
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
formate + oxalyl-CoA
-
-
?
formyl-CoA + oxalate
Starkeya novella
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
formate + oxalyl-CoA
-
-
?
formyl-CoA + oxalate
Azospirillum brasilense
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
formate + oxalyl-CoA
-
-
?
formyl-CoA + oxalate
Streptomyces violaceoruber
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
formate + oxalyl-CoA
-
-
?
formyl-CoA + oxalate
Xanthomonas sp.
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
formate + oxalyl-CoA
-
-
?
formyl-CoA + oxalate
Xanthobacter flavus
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
formate + oxalyl-CoA
-
-
?
formyl-CoA + oxalate
Cupriavidus oxalaticus
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
formate + oxalyl-CoA
-
-
?
formyl-CoA + oxalate
Methylorubrum extorquens
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
formate + oxalyl-CoA
-
-
?
formyl-CoA + oxalate
Methylobacterium organophilum
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
formate + oxalyl-CoA
-
-
?
formyl-CoA + oxalate
Variovorax paradoxus
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
formate + oxalyl-CoA
-
-
?
formyl-CoA + oxalate
Azospirillum lipoferum
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
formate + oxalyl-CoA
-
-
?
formyl-CoA + oxalate
Oxalobacter formigenes
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
formate + oxalyl-CoA
-
-
?
formyl-CoA + oxalate
Cupriavidus necator
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
formate + oxalyl-CoA
-
-
?
formyl-CoA + oxalate
Rhodopseudomonas palustris
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
formate + oxalyl-CoA
-
-
?
formyl-CoA + oxalate
Shigella flexneri
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
formate + oxalyl-CoA
-
-
?
formyl-CoA + oxalate
Streptomyces avermitilis
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
formate + oxalyl-CoA
-
-
?
formyl-CoA + oxalate
Streptomyces coelicolor
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
formate + oxalyl-CoA
-
-
?
formyl-CoA + oxalate
Xanthobacter autotrophicus
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
formate + oxalyl-CoA
-
-
?
formyl-CoA + oxalate
Ancylobacter polymorphus
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
formate + oxalyl-CoA
-
-
?
formyl-CoA + oxalate
Ancylobacter oerskovii
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
formate + oxalyl-CoA
-
-
?
formyl-CoA + oxalate
Bradyrhizobium japonicum
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
formate + oxalyl-CoA
-
-
?
formyl-CoA + oxalate
Methylorubrum thiocyanatum
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
formate + oxalyl-CoA
-
-
?
formyl-CoA + oxalate
Pandoraea sp.
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
formate + oxalyl-CoA
-
-
?
formyl-CoA + oxalate
Oxalicibacterium flavum
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
formate + oxalyl-CoA
-
-
?
formyl-CoA + oxalate
Bradyrhizobium sp.
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
formate + oxalyl-CoA
-
-
?
formyl-CoA + oxalate
Arquibacter sp.
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
formate + oxalyl-CoA
-
-
?
formyl-CoA + oxalate
Herminiimonas saxobsidens
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
formate + oxalyl-CoA
-
-
?
formyl-CoA + oxalate
Azorhizobium sp.
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
formate + oxalyl-CoA
-
-
?
formyl-CoA + oxalate
Paraburkholderia xenovorans
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
formate + oxalyl-CoA
-
-
?
formyl-CoA + oxalate
Herminiimonas arsenicoxydans
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
formate + oxalyl-CoA
-
-
?
formyl-CoA + oxalate
Janthinobacterium sp. Marseille
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
formate + oxalyl-CoA
-
-
?
formyl-CoA + oxalate
Cupriavidus necator JMP 134-1
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
formate + oxalyl-CoA
-
-
?
Organism
Organism
Primary Accession No. (UniProt)
Commentary
Textmining
Ancylobacter oerskovii
-
-
-
Ancylobacter polymorphus
B3VMH8
fragment
-
Arquibacter sp.
-
-
-
Azorhizobium sp.
-
-
-
Azospirillum brasilense
-
-
-
Azospirillum lipoferum
-
-
-
Bradyrhizobium japonicum
Q89QH2
USDA 110, gene frc, no detection of the frc-gene in Klebsiella oxytoca, Bacillus subtilis, Micrococcus luteus, Microvirgula aerodenitrificans, Paracoccus denitrificans, Rhodococcus opacus, Xanthobacter agilis and Pseudomonas aeruginosa
-
Bradyrhizobium sp.
A5EGD7
BTAi1, frc gene
-
Cupriavidus necator
Q0K0H8
H16 gene
-
Cupriavidus necator
Q46S66
JMP134, Reut_B4669 gene
-
Cupriavidus necator
Q46S72
JMP 134
-
Cupriavidus necator JMP 134-1
Q46S72
JMP 134
-
Cupriavidus oxalaticus
-
-
-
Escherichia coli
-
B, frc gene, but no Ca-oxalat utilization
-
Escherichia coli
P69902
K12, frc gene
-
Herminiimonas arsenicoxydans
A4G241
frcA gene
-
Herminiimonas arsenicoxydans
A4G242
frcB gene
-
Herminiimonas saxobsidens
-
-
-
Janthinobacterium sp. Marseille
A6T0J2
caiB3 gene
-
Methylobacterium organophilum
-
-
-
Methylorubrum extorquens
-
-
-
Methylorubrum thiocyanatum
-
-
-
Oxalicibacterium flavum
-
-
-
Oxalobacter formigenes
O06644
frc gene
-
Pandoraea sp.
-
-
-
Paraburkholderia xenovorans
Q13RQ4
LB400, frc gene
-
Rhodopseudomonas palustris
Q6N8F8
CGA009, frc gene
-
Shigella flexneri
P69903
2a strain 301, frc gene
-
Starkeya novella
-
-
-
Streptomyces avermitilis
Q82M40
MA-4680, frc gene
-
Streptomyces coelicolor
O87838
A3, frc gene
-
Streptomyces violaceoruber
-
-
-
Variovorax paradoxus
-
-
-
Xanthobacter autotrophicus
A7ICK2
Py2, Xaut_0487 gene
-
Xanthobacter flavus
-
-
-
Xanthomonas sp.
-
frc gene, but no Ca-oxalate utilization
-
Source Tissue
Source Tissue
Commentary
Organism
Textmining
enrichment culture
oxalate enrichment culture
Ancylobacter oerskovii
-
enrichment culture
oxalate enrichment culture
Ancylobacter polymorphus
-
enrichment culture
oxalate enrichment culture
Arquibacter sp.
-
enrichment culture
oxalate enrichment culture
Azorhizobium sp.
-
enrichment culture
oxalate enrichment culture
Azospirillum brasilense
-
enrichment culture
oxalate enrichment culture
Azospirillum lipoferum
-
enrichment culture
oxalate enrichment culture
Bradyrhizobium japonicum
-
enrichment culture
oxalate enrichment culture
Bradyrhizobium sp.
-
enrichment culture
oxalate enrichment culture; oxalate enrichment culture; oxalate enrichment culture
Cupriavidus necator
-
enrichment culture
oxalate enrichment culture
Cupriavidus oxalaticus
-
enrichment culture
oxalate enrichment culture; oxalate enrichment culture
Escherichia coli
-
enrichment culture
oxalate enrichment culture; oxalate enrichment culture
Herminiimonas arsenicoxydans
-
enrichment culture
oxalate enrichment culture
Herminiimonas saxobsidens
-
enrichment culture
oxalate enrichment culture
Janthinobacterium sp. Marseille
-
enrichment culture
oxalate enrichment culture
Methylobacterium organophilum
-
enrichment culture
oxalate enrichment culture
Methylorubrum extorquens
-
enrichment culture
oxalate enrichment culture
Methylorubrum thiocyanatum
-
enrichment culture
oxalate enrichment culture
Oxalicibacterium flavum
-
enrichment culture
oxalate enrichment culture
Oxalobacter formigenes
-
enrichment culture
oxalate enrichment culture
Pandoraea sp.
-
enrichment culture
oxalate enrichment culture
Paraburkholderia xenovorans
-
enrichment culture
oxalate enrichment culture
Rhodopseudomonas palustris
-
enrichment culture
oxalate enrichment culture
Shigella flexneri
-
enrichment culture
oxalate enrichment culture
Starkeya novella
-
enrichment culture
oxalate enrichment culture
Streptomyces avermitilis
-
enrichment culture
oxalate enrichment culture
Streptomyces coelicolor
-
enrichment culture
oxalate enrichment culture
Streptomyces violaceoruber
-
enrichment culture
oxalate enrichment culture
Variovorax paradoxus
-
enrichment culture
oxalate enrichment culture
Xanthobacter autotrophicus
-
enrichment culture
oxalate enrichment culture
Xanthobacter flavus
-
enrichment culture
oxalate enrichment culture
Xanthomonas sp.
-
soil
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Ancylobacter oerskovii
-
soil
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Ancylobacter polymorphus
-
soil
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Arquibacter sp.
-
soil
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Azorhizobium sp.
-
soil
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Azospirillum brasilense
-
soil
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Azospirillum lipoferum
-
soil
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Bradyrhizobium japonicum
-
soil
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Bradyrhizobium sp.
-
soil
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees; soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees; soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Cupriavidus necator
-
soil
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Cupriavidus oxalaticus
-
soil
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees; soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Escherichia coli
-
soil
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees; soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Herminiimonas arsenicoxydans
-
soil
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Herminiimonas saxobsidens
-
soil
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Janthinobacterium sp. Marseille
-
soil
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Methylobacterium organophilum
-
soil
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Methylorubrum extorquens
-
soil
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Methylorubrum thiocyanatum
-
soil
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Oxalicibacterium flavum
-
soil
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Oxalobacter formigenes
-
soil
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Pandoraea sp.
-
soil
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Paraburkholderia xenovorans
-
soil
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Rhodopseudomonas palustris
-
soil
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Shigella flexneri
-
soil
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Starkeya novella
-
soil
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Streptomyces avermitilis
-
soil
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Streptomyces coelicolor
-
soil
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Streptomyces violaceoruber
-
soil
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Variovorax paradoxus
-
soil
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Xanthobacter autotrophicus
-
soil
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Xanthobacter flavus
-
soil
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Xanthomonas sp.
-
Substrates and Products (Substrate)
Substrates
Commentary Substrates
Literature (Substrates)
Organism
Products
Commentary (Products)
Literature (Products)
Organism (Products)
Reversibility
formyl-CoA + oxalate
-
693608
Escherichia coli
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
-
693608
Starkeya novella
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
-
693608
Azospirillum brasilense
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
-
693608
Streptomyces violaceoruber
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
-
693608
Xanthomonas sp.
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
-
693608
Xanthobacter flavus
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
-
693608
Cupriavidus oxalaticus
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
-
693608
Methylorubrum extorquens
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
-
693608
Methylobacterium organophilum
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
-
693608
Variovorax paradoxus
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
-
693608
Azospirillum lipoferum
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
-
693608
Oxalobacter formigenes
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
-
693608
Cupriavidus necator
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
-
693608
Rhodopseudomonas palustris
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
-
693608
Shigella flexneri
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
-
693608
Streptomyces avermitilis
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
-
693608
Streptomyces coelicolor
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
-
693608
Xanthobacter autotrophicus
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
-
693608
Ancylobacter polymorphus
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
-
693608
Ancylobacter oerskovii
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
-
693608
Bradyrhizobium japonicum
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
-
693608
Methylorubrum thiocyanatum
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
-
693608
Pandoraea sp.
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
-
693608
Oxalicibacterium flavum
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
-
693608
Bradyrhizobium sp.
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
-
693608
Arquibacter sp.
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
-
693608
Herminiimonas saxobsidens
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
-
693608
Azorhizobium sp.
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
-
693608
Paraburkholderia xenovorans
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
-
693608
Herminiimonas arsenicoxydans
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
-
693608
Janthinobacterium sp. Marseille
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
693608
Escherichia coli
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
693608
Starkeya novella
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
693608
Azospirillum brasilense
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
693608
Streptomyces violaceoruber
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
693608
Xanthomonas sp.
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
693608
Xanthobacter flavus
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
693608
Cupriavidus oxalaticus
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
693608
Methylorubrum extorquens
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
693608
Methylobacterium organophilum
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
693608
Variovorax paradoxus
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
693608
Azospirillum lipoferum
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
693608
Oxalobacter formigenes
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
693608
Cupriavidus necator
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
693608
Rhodopseudomonas palustris
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
693608
Shigella flexneri
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
693608
Streptomyces avermitilis
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
693608
Streptomyces coelicolor
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
693608
Xanthobacter autotrophicus
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
693608
Ancylobacter polymorphus
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
693608
Ancylobacter oerskovii
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
693608
Bradyrhizobium japonicum
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
693608
Methylorubrum thiocyanatum
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
693608
Pandoraea sp.
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
693608
Oxalicibacterium flavum
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
693608
Bradyrhizobium sp.
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
693608
Arquibacter sp.
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
693608
Herminiimonas saxobsidens
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
693608
Azorhizobium sp.
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
693608
Paraburkholderia xenovorans
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
693608
Herminiimonas arsenicoxydans
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
693608
Janthinobacterium sp. Marseille
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
-
693608
Cupriavidus necator JMP 134-1
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
693608
Cupriavidus necator JMP 134-1
formate + oxalyl-CoA
-
-
-
?
Application (protein specific)
Application
Commentary
Organism
environmental protection
bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.
Ancylobacter oerskovii
environmental protection
bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.
Ancylobacter polymorphus
environmental protection
bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.
Arquibacter sp.
environmental protection
bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.
Azorhizobium sp.
environmental protection
bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.
Azospirillum brasilense
environmental protection
bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.
Azospirillum lipoferum
environmental protection
bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.
Bradyrhizobium japonicum
environmental protection
bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.
Bradyrhizobium sp.
environmental protection
bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.
Cupriavidus necator
environmental protection
bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.
Cupriavidus oxalaticus
environmental protection
bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.
Escherichia coli
environmental protection
bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.
Herminiimonas arsenicoxydans
environmental protection
bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.
Herminiimonas saxobsidens
environmental protection
bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.
Janthinobacterium sp. Marseille
environmental protection
bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.
Methylobacterium organophilum
environmental protection
bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.
Methylorubrum extorquens
environmental protection
bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.
Methylorubrum thiocyanatum
environmental protection
bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.
Oxalicibacterium flavum
environmental protection
bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.
Oxalobacter formigenes
environmental protection
bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.
Pandoraea sp.
environmental protection
bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.
Paraburkholderia xenovorans
environmental protection
bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.
Rhodopseudomonas palustris
environmental protection
bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.
Shigella flexneri
environmental protection
bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.
Starkeya novella
environmental protection
bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.
Streptomyces avermitilis
environmental protection
bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.
Streptomyces coelicolor
environmental protection
bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.
Streptomyces violaceoruber
environmental protection
bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.
Variovorax paradoxus
environmental protection
bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.
Xanthobacter autotrophicus
environmental protection
bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.
Xanthobacter flavus
environmental protection
bacterial oxalate-degrading function, microbiological processes are considered as the main oxalate sinks in natural environments, in soil oxalate from fungi, plant root exudates and decaying plant tissues display powerful metal chelating properties. Oxalate takes part in plant nutrition status by increasing the availability of phosphate and other poorly soluble micro-nutriments, through its ability to complex and remove excess metal cations. It also plays an important role in the detoxification of heavy metals in the vicinity of plant roots.
Xanthomonas sp.
medicine
bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders
Ancylobacter oerskovii
medicine
bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders
Ancylobacter polymorphus
medicine
bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders
Arquibacter sp.
medicine
bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders
Azorhizobium sp.
medicine
bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders
Azospirillum brasilense
medicine
bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders
Azospirillum lipoferum
medicine
bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders
Bradyrhizobium japonicum
medicine
bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders
Bradyrhizobium sp.
medicine
bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders
Cupriavidus necator
medicine
bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders
Cupriavidus oxalaticus
medicine
bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders
Escherichia coli
medicine
bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders
Herminiimonas arsenicoxydans
medicine
bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders
Herminiimonas saxobsidens
medicine
bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders
Janthinobacterium sp. Marseille
medicine
bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders
Methylobacterium organophilum
medicine
bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders
Methylorubrum extorquens
medicine
bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders
Methylorubrum thiocyanatum
medicine
bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders
Oxalicibacterium flavum
medicine
bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders
Oxalobacter formigenes
medicine
bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders
Pandoraea sp.
medicine
bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders
Paraburkholderia xenovorans
medicine
bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders
Rhodopseudomonas palustris
medicine
bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders
Shigella flexneri
medicine
bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders
Starkeya novella
medicine
bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders
Streptomyces avermitilis
medicine
bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders
Streptomyces coelicolor
medicine
bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders
Streptomyces violaceoruber
medicine
bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders
Variovorax paradoxus
medicine
bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders
Xanthobacter autotrophicus
medicine
bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders
Xanthobacter flavus
medicine
bacterial oxalate-degrading function, in humans an accumulation of oxalic acid can result in a number of pathologic conditions, including hyperoxaluria, urolithiasis, renal failure, cardiomyopathy and cardiac conductance disorders
Xanthomonas sp.
molecular biology
use of the frc gene as template for PCR to detect oxalotrophic bacteria
Ancylobacter oerskovii
molecular biology
use of the frc gene as template for PCR to detect oxalotrophic bacteria
Ancylobacter polymorphus
molecular biology
use of the frc gene as template for PCR to detect oxalotrophic bacteria
Arquibacter sp.
molecular biology
use of the frc gene as template for PCR to detect oxalotrophic bacteria
Azorhizobium sp.
molecular biology
use of the frc gene as template for PCR to detect oxalotrophic bacteria
Azospirillum brasilense
molecular biology
use of the frc gene as template for PCR to detect oxalotrophic bacteria
Azospirillum lipoferum
molecular biology
use of the frc gene as template for PCR to detect oxalotrophic bacteria
Bradyrhizobium japonicum
molecular biology
use of the frc gene as template for PCR to detect oxalotrophic bacteria
Bradyrhizobium sp.
molecular biology
use of the frc gene as template for PCR to detect oxalotrophic bacteria
Cupriavidus necator
molecular biology
use of the frc gene as template for PCR to detect oxalotrophic bacteria
Cupriavidus oxalaticus
molecular biology
use of the frc gene as template for PCR to detect oxalotrophic bacteria
Escherichia coli
molecular biology
use of the frc gene as template for PCR to detect oxalotrophic bacteria
Herminiimonas arsenicoxydans
molecular biology
use of the frc gene as template for PCR to detect oxalotrophic bacteria
Herminiimonas saxobsidens
molecular biology
use of the frc gene as template for PCR to detect oxalotrophic bacteria
Janthinobacterium sp. Marseille
molecular biology
use of the frc gene as template for PCR to detect oxalotrophic bacteria
Methylobacterium organophilum
molecular biology
use of the frc gene as template for PCR to detect oxalotrophic bacteria
Methylorubrum extorquens
molecular biology
use of the frc gene as template for PCR to detect oxalotrophic bacteria
Methylorubrum thiocyanatum
molecular biology
use of the frc gene as template for PCR to detect oxalotrophic bacteria
Oxalicibacterium flavum
molecular biology
use of the frc gene as template for PCR to detect oxalotrophic bacteria
Oxalobacter formigenes
molecular biology
use of the frc gene as template for PCR to detect oxalotrophic bacteria
Pandoraea sp.
molecular biology
use of the frc gene as template for PCR to detect oxalotrophic bacteria
Paraburkholderia xenovorans
molecular biology
use of the frc gene as template for PCR to detect oxalotrophic bacteria
Rhodopseudomonas palustris
molecular biology
use of the frc gene as template for PCR to detect oxalotrophic bacteria
Shigella flexneri
molecular biology
use of the frc gene as template for PCR to detect oxalotrophic bacteria
Starkeya novella
molecular biology
use of the frc gene as template for PCR to detect oxalotrophic bacteria
Streptomyces avermitilis
molecular biology
use of the frc gene as template for PCR to detect oxalotrophic bacteria
Streptomyces coelicolor
molecular biology
use of the frc gene as template for PCR to detect oxalotrophic bacteria
Streptomyces violaceoruber
molecular biology
use of the frc gene as template for PCR to detect oxalotrophic bacteria
Variovorax paradoxus
molecular biology
use of the frc gene as template for PCR to detect oxalotrophic bacteria
Xanthobacter autotrophicus
molecular biology
use of the frc gene as template for PCR to detect oxalotrophic bacteria
Xanthobacter flavus
molecular biology
use of the frc gene as template for PCR to detect oxalotrophic bacteria
Xanthomonas sp.
Cloned(Commentary) (protein specific)
Commentary
Organism
expression in Escherichia coli XL1
Ancylobacter oerskovii
expression in Escherichia coli XL1
Ancylobacter polymorphus
expression in Escherichia coli XL1
Arquibacter sp.
expression in Escherichia coli XL1
Azorhizobium sp.
expression in Escherichia coli XL1
Azospirillum brasilense
expression in Escherichia coli XL1
Azospirillum lipoferum
expression in Escherichia coli XL1
Bradyrhizobium japonicum
expression in Escherichia coli XL1
Bradyrhizobium sp.
expression in Escherichia coli XL1
Cupriavidus necator
expression in Escherichia coli XL1
Cupriavidus oxalaticus
expression in Escherichia coli XL1
Escherichia coli
expression in Escherichia coli XL1
Herminiimonas arsenicoxydans
expression in Escherichia coli XL1
Herminiimonas saxobsidens
expression in Escherichia coli XL1
Janthinobacterium sp. Marseille
expression in Escherichia coli XL1
Methylobacterium organophilum
expression in Escherichia coli XL1
Methylorubrum extorquens
expression in Escherichia coli XL1
Methylorubrum thiocyanatum
expression in Escherichia coli XL1
Oxalicibacterium flavum
expression in Escherichia coli XL1
Oxalobacter formigenes
expression in Escherichia coli XL1
Pandoraea sp.
expression in Escherichia coli XL1
Paraburkholderia xenovorans
expression in Escherichia coli XL1
Rhodopseudomonas palustris
expression in Escherichia coli XL1
Shigella flexneri
expression in Escherichia coli XL1
Starkeya novella
expression in Escherichia coli XL1
Streptomyces avermitilis
expression in Escherichia coli XL1
Streptomyces coelicolor
expression in Escherichia coli XL1
Streptomyces violaceoruber
expression in Escherichia coli XL1
Variovorax paradoxus
expression in Escherichia coli XL1
Xanthobacter autotrophicus
expression in Escherichia coli XL1
Xanthobacter flavus
expression in Escherichia coli XL1
Xanthomonas sp.
Natural Substrates/ Products (Substrates) (protein specific)
Natural Substrates
Organism
Commentary (Nat. Sub.)
Natural Products
Commentary (Nat. Pro.)
Organism (Nat. Pro.)
Reversibility
formyl-CoA + oxalate
Escherichia coli
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
formate + oxalyl-CoA
-
-
?
formyl-CoA + oxalate
Starkeya novella
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
formate + oxalyl-CoA
-
-
?
formyl-CoA + oxalate
Azospirillum brasilense
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
formate + oxalyl-CoA
-
-
?
formyl-CoA + oxalate
Streptomyces violaceoruber
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
formate + oxalyl-CoA
-
-
?
formyl-CoA + oxalate
Xanthomonas sp.
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
formate + oxalyl-CoA
-
-
?
formyl-CoA + oxalate
Xanthobacter flavus
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
formate + oxalyl-CoA
-
-
?
formyl-CoA + oxalate
Cupriavidus oxalaticus
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
formate + oxalyl-CoA
-
-
?
formyl-CoA + oxalate
Methylorubrum extorquens
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
formate + oxalyl-CoA
-
-
?
formyl-CoA + oxalate
Methylobacterium organophilum
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
formate + oxalyl-CoA
-
-
?
formyl-CoA + oxalate
Variovorax paradoxus
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
formate + oxalyl-CoA
-
-
?
formyl-CoA + oxalate
Azospirillum lipoferum
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
formate + oxalyl-CoA
-
-
?
formyl-CoA + oxalate
Oxalobacter formigenes
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
formate + oxalyl-CoA
-
-
?
formyl-CoA + oxalate
Cupriavidus necator
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
formate + oxalyl-CoA
-
-
?
formyl-CoA + oxalate
Rhodopseudomonas palustris
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
formate + oxalyl-CoA
-
-
?
formyl-CoA + oxalate
Shigella flexneri
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
formate + oxalyl-CoA
-
-
?
formyl-CoA + oxalate
Streptomyces avermitilis
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
formate + oxalyl-CoA
-
-
?
formyl-CoA + oxalate
Streptomyces coelicolor
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
formate + oxalyl-CoA
-
-
?
formyl-CoA + oxalate
Xanthobacter autotrophicus
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
formate + oxalyl-CoA
-
-
?
formyl-CoA + oxalate
Ancylobacter polymorphus
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
formate + oxalyl-CoA
-
-
?
formyl-CoA + oxalate
Ancylobacter oerskovii
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
formate + oxalyl-CoA
-
-
?
formyl-CoA + oxalate
Bradyrhizobium japonicum
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
formate + oxalyl-CoA
-
-
?
formyl-CoA + oxalate
Methylorubrum thiocyanatum
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
formate + oxalyl-CoA
-
-
?
formyl-CoA + oxalate
Pandoraea sp.
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
formate + oxalyl-CoA
-
-
?
formyl-CoA + oxalate
Oxalicibacterium flavum
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
formate + oxalyl-CoA
-
-
?
formyl-CoA + oxalate
Bradyrhizobium sp.
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
formate + oxalyl-CoA
-
-
?
formyl-CoA + oxalate
Arquibacter sp.
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
formate + oxalyl-CoA
-
-
?
formyl-CoA + oxalate
Herminiimonas saxobsidens
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
formate + oxalyl-CoA
-
-
?
formyl-CoA + oxalate
Azorhizobium sp.
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
formate + oxalyl-CoA
-
-
?
formyl-CoA + oxalate
Paraburkholderia xenovorans
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
formate + oxalyl-CoA
-
-
?
formyl-CoA + oxalate
Herminiimonas arsenicoxydans
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
formate + oxalyl-CoA
-
-
?
formyl-CoA + oxalate
Janthinobacterium sp. Marseille
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
formate + oxalyl-CoA
-
-
?
formyl-CoA + oxalate
Cupriavidus necator JMP 134-1
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
formate + oxalyl-CoA
-
-
?
Source Tissue (protein specific)
Source Tissue
Commentary
Organism
Textmining
enrichment culture
oxalate enrichment culture
Ancylobacter oerskovii
-
enrichment culture
oxalate enrichment culture
Ancylobacter polymorphus
-
enrichment culture
oxalate enrichment culture
Arquibacter sp.
-
enrichment culture
oxalate enrichment culture
Azorhizobium sp.
-
enrichment culture
oxalate enrichment culture
Azospirillum brasilense
-
enrichment culture
oxalate enrichment culture
Azospirillum lipoferum
-
enrichment culture
oxalate enrichment culture
Bradyrhizobium japonicum
-
enrichment culture
oxalate enrichment culture
Bradyrhizobium sp.
-
enrichment culture
oxalate enrichment culture
Cupriavidus necator
-
enrichment culture
oxalate enrichment culture
Cupriavidus oxalaticus
-
enrichment culture
oxalate enrichment culture
Escherichia coli
-
enrichment culture
oxalate enrichment culture
Herminiimonas arsenicoxydans
-
enrichment culture
oxalate enrichment culture
Herminiimonas saxobsidens
-
enrichment culture
oxalate enrichment culture
Janthinobacterium sp. Marseille
-
enrichment culture
oxalate enrichment culture
Methylobacterium organophilum
-
enrichment culture
oxalate enrichment culture
Methylorubrum extorquens
-
enrichment culture
oxalate enrichment culture
Methylorubrum thiocyanatum
-
enrichment culture
oxalate enrichment culture
Oxalicibacterium flavum
-
enrichment culture
oxalate enrichment culture
Oxalobacter formigenes
-
enrichment culture
oxalate enrichment culture
Pandoraea sp.
-
enrichment culture
oxalate enrichment culture
Paraburkholderia xenovorans
-
enrichment culture
oxalate enrichment culture
Rhodopseudomonas palustris
-
enrichment culture
oxalate enrichment culture
Shigella flexneri
-
enrichment culture
oxalate enrichment culture
Starkeya novella
-
enrichment culture
oxalate enrichment culture
Streptomyces avermitilis
-
enrichment culture
oxalate enrichment culture
Streptomyces coelicolor
-
enrichment culture
oxalate enrichment culture
Streptomyces violaceoruber
-
enrichment culture
oxalate enrichment culture
Variovorax paradoxus
-
enrichment culture
oxalate enrichment culture
Xanthobacter autotrophicus
-
enrichment culture
oxalate enrichment culture
Xanthobacter flavus
-
enrichment culture
oxalate enrichment culture
Xanthomonas sp.
-
soil
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Ancylobacter oerskovii
-
soil
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Ancylobacter polymorphus
-
soil
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Arquibacter sp.
-
soil
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Azorhizobium sp.
-
soil
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Azospirillum brasilense
-
soil
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Azospirillum lipoferum
-
soil
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Bradyrhizobium japonicum
-
soil
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Bradyrhizobium sp.
-
soil
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Cupriavidus necator
-
soil
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Cupriavidus oxalaticus
-
soil
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Escherichia coli
-
soil
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Herminiimonas arsenicoxydans
-
soil
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Herminiimonas saxobsidens
-
soil
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Janthinobacterium sp. Marseille
-
soil
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Methylobacterium organophilum
-
soil
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Methylorubrum extorquens
-
soil
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Methylorubrum thiocyanatum
-
soil
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Oxalicibacterium flavum
-
soil
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Oxalobacter formigenes
-
soil
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Pandoraea sp.
-
soil
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Paraburkholderia xenovorans
-
soil
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Rhodopseudomonas palustris
-
soil
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Shigella flexneri
-
soil
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Starkeya novella
-
soil
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Streptomyces avermitilis
-
soil
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Streptomyces coelicolor
-
soil
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Streptomyces violaceoruber
-
soil
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Variovorax paradoxus
-
soil
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Xanthobacter autotrophicus
-
soil
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Xanthobacter flavus
-
soil
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Xanthomonas sp.
-
Substrates and Products (Substrate) (protein specific)
Substrates
Commentary Substrates
Literature (Substrates)
Organism
Products
Commentary (Products)
Literature (Products)
Organism (Products)
Reversibility
formyl-CoA + oxalate
-
693608
Escherichia coli
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
-
693608
Starkeya novella
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
-
693608
Azospirillum brasilense
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
-
693608
Streptomyces violaceoruber
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
-
693608
Xanthomonas sp.
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
-
693608
Xanthobacter flavus
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
-
693608
Cupriavidus oxalaticus
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
-
693608
Methylorubrum extorquens
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
-
693608
Methylobacterium organophilum
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
-
693608
Variovorax paradoxus
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
-
693608
Azospirillum lipoferum
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
-
693608
Oxalobacter formigenes
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
-
693608
Cupriavidus necator
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
-
693608
Rhodopseudomonas palustris
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
-
693608
Shigella flexneri
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
-
693608
Streptomyces avermitilis
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
-
693608
Streptomyces coelicolor
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
-
693608
Xanthobacter autotrophicus
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
-
693608
Ancylobacter polymorphus
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
-
693608
Ancylobacter oerskovii
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
-
693608
Bradyrhizobium japonicum
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
-
693608
Methylorubrum thiocyanatum
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
-
693608
Pandoraea sp.
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
-
693608
Oxalicibacterium flavum
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
-
693608
Bradyrhizobium sp.
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
-
693608
Arquibacter sp.
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
-
693608
Herminiimonas saxobsidens
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
-
693608
Azorhizobium sp.
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
-
693608
Paraburkholderia xenovorans
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
-
693608
Herminiimonas arsenicoxydans
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
-
693608
Janthinobacterium sp. Marseille
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
693608
Escherichia coli
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
693608
Starkeya novella
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
693608
Azospirillum brasilense
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
693608
Streptomyces violaceoruber
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
693608
Xanthomonas sp.
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
693608
Xanthobacter flavus
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
693608
Cupriavidus oxalaticus
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
693608
Methylorubrum extorquens
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
693608
Methylobacterium organophilum
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
693608
Variovorax paradoxus
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
693608
Azospirillum lipoferum
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
693608
Oxalobacter formigenes
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
693608
Cupriavidus necator
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
693608
Rhodopseudomonas palustris
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
693608
Shigella flexneri
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
693608
Streptomyces avermitilis
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
693608
Streptomyces coelicolor
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
693608
Xanthobacter autotrophicus
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
693608
Ancylobacter polymorphus
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
693608
Ancylobacter oerskovii
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
693608
Bradyrhizobium japonicum
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
693608
Methylorubrum thiocyanatum
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
693608
Pandoraea sp.
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
693608
Oxalicibacterium flavum
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
693608
Bradyrhizobium sp.
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
693608
Arquibacter sp.
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
693608
Herminiimonas saxobsidens
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
693608
Azorhizobium sp.
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
693608
Paraburkholderia xenovorans
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
693608
Herminiimonas arsenicoxydans
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
693608
Janthinobacterium sp. Marseille
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
-
693608
Cupriavidus necator JMP 134-1
formate + oxalyl-CoA
-
-
-
?
formyl-CoA + oxalate
oxalate is a highly oxidized compound that may be used as C- and energy sources by oxalotrophic bacteria
693608
Cupriavidus necator JMP 134-1
formate + oxalyl-CoA
-
-
-
?
Other publictions for EC 2.8.3.16
No.
1st author
Pub Med
title
organims
journal
volume
pages
year
Activating Compound
Application
Cloned(Commentary)
Crystallization (Commentary)
Engineering
General Stability
Inhibitors
KM Value [mM]
Localization
Metals/Ions
Molecular Weight [Da]
Natural Substrates/ Products (Substrates)
Organic Solvent Stability
Organism
Oxidation Stability
Posttranslational Modification
Purification (Commentary)
Reaction
Renatured (Commentary)
Source Tissue
Specific Activity [micromol/min/mg]
Storage Stability
Substrates and Products (Substrate)
Subunits
Temperature Optimum [°C]
Temperature Range [°C]
Temperature Stability [°C]
Turnover Number [1/s]
pH Optimum
pH Range
pH Stability
Cofactor
Ki Value [mM]
pI Value
IC50 Value
Activating Compound (protein specific)
Application (protein specific)
Cloned(Commentary) (protein specific)
Cofactor (protein specific)
Crystallization (Commentary) (protein specific)
Engineering (protein specific)
General Stability (protein specific)
IC50 Value (protein specific)
Inhibitors (protein specific)
Ki Value [mM] (protein specific)
KM Value [mM] (protein specific)
Localization (protein specific)
Metals/Ions (protein specific)
Molecular Weight [Da] (protein specific)
Natural Substrates/ Products (Substrates) (protein specific)
Organic Solvent Stability (protein specific)
Oxidation Stability (protein specific)
Posttranslational Modification (protein specific)
Purification (Commentary) (protein specific)
Renatured (Commentary) (protein specific)
Source Tissue (protein specific)
Specific Activity [micromol/min/mg] (protein specific)
Storage Stability (protein specific)
Substrates and Products (Substrate) (protein specific)
Subunits (protein specific)
Temperature Optimum [°C] (protein specific)
Temperature Range [°C] (protein specific)
Temperature Stability [°C] (protein specific)
Turnover Number [1/s] (protein specific)
pH Optimum (protein specific)
pH Range (protein specific)
pH Stability (protein specific)
pI Value (protein specific)
Expression
General Information
General Information (protein specific)
Expression (protein specific)
KCat/KM [mM/s]
KCat/KM [mM/s] (protein specific)
739759
Herve
Diversity and ecology of oxalo ...
Actinobacteria, Firmicutes, Proteobacteria
World J. Microbiol. Biotechnol.
32
28
2016
-
-
-
-
-
-
-
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3
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3
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3
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-
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-
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3
-
-
-
-
-
-
-
-
3
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
726452
Mullins
Formyl-coenzyme A (CoA):oxalat ...
Acetobacter aceti 1023, Acetobacter aceti
Protein Sci.
21
686-696
2012
-
-
1
1
-
-
-
2
1
-
4
2
-
4
-
-
1
-
-
-
-
-
2
1
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-
-
2
-
-
-
-
-
-
-
-
-
1
-
1
-
-
-
-
-
2
1
-
4
2
-
-
-
1
-
-
-
-
2
1
-
-
-
2
-
-
-
-
1
-
-
1
2
2
692851
Toyota
Differential substrate specifi ...
Escherichia coli, Escherichia coli MG1655, Oxalobacter formigenes
J. Bacteriol.
190
2556-2564
2008
-
-
2
1
2
-
4
10
-
-
-
3
-
31
-
-
2
-
-
-
-
-
6
-
-
-
-
-
-
-
-
-
2
-
-
-
-
2
-
1
2
-
-
4
2
10
-
-
-
3
-
-
-
2
-
-
-
-
6
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
693216
Berthold
Reinvestigation of the catalyt ...
Oxalobacter formigenes
J. Biol. Chem.
283
6519-6529
2008
-
-
1
1
3
-
2
8
-
-
-
1
-
2
-
-
1
-
-
-
-
1
2
1
-
-
-
-
-
-
-
-
2
-
-
-
-
1
-
1
3
-
-
2
2
8
-
-
-
1
-
-
-
1
-
-
-
1
2
1
-
-
-
-
-
-
-
-
-
-
-
-
-
-
693608
Khammar
Use of the frc gene as a molec ...
Ancylobacter oerskovii, Ancylobacter polymorphus, Arquibacter sp., Azorhizobium sp., Azospirillum brasilense, Azospirillum lipoferum, Bradyrhizobium japonicum, Bradyrhizobium sp., Cupriavidus necator, Cupriavidus necator JMP 134-1, Cupriavidus oxalaticus, Escherichia coli, Herminiimonas arsenicoxydans, Herminiimonas saxobsidens, Janthinobacterium sp. Marseille, Methylobacterium organophilum, Methylorubrum extorquens, Methylorubrum thiocyanatum, Oxalicibacterium flavum, Oxalobacter formigenes, Pandoraea sp., Paraburkholderia xenovorans, Rhodopseudomonas palustris, Shigella flexneri, Starkeya novella, Streptomyces avermitilis, Streptomyces coelicolor, Streptomyces violaceoruber, Variovorax paradoxus, Xanthobacter autotrophicus, Xanthobacter flavus, Xanthomonas sp.
J. Microbiol. Methods
76
120-127
2008
-
93
31
-
-
-
-
-
-
-
-
36
-
39
-
-
-
-
-
62
-
-
72
-
-
-
-
-
-
-
-
-
-
-
-
-
105
35
-
-
-
-
-
-
-
-
-
-
-
36
-
-
-
-
-
70
-
-
72
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
674225
Turroni
Oxalate consumption by lactoba ...
Lactobacillus acidophilus
J. Appl. Microbiol.
103
1600-1609
2007
-
-
1
-
-
-
-
-
-
-
1
1
-
5
-
-
-
-
-
-
-
-
2
1
1
-
-
-
1
-
-
-
-
-
-
-
-
1
-
-
-
-
-
-
-
-
-
-
1
1
-
-
-
-
-
-
-
-
2
1
1
-
-
-
1
-
-
-
-
-
-
-
-
-
692373
Lewanika
Lactobacillus gasseri Gasser A ...
Lactobacillus gasseri, Lactobacillus gasseri Gasser AM63T
FEMS Microbiol. Ecol.
61
110-120
2007
-
1
-
-
-
-
-
-
-
-
-
2
-
6
-
-
-
-
-
-
-
-
4
-
-
-
-
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-
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-
-
-
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-
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1
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2
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-
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-
4
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
692677
Ye
Stable expression of the oxc a ...
Oxalobacter formigenes
Int. J. Mol. Med.
20
521-526
2007
-
1
1
-
-
-
-
-
1
-
-
1
-
4
-
-
-
-
-
-
-
-
2
-
-
-
-
-
-
-
-
-
-
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1
1
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-
-
-
-
-
-
-
1
-
-
1
-
-
-
-
-
-
-
-
2
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
671452
Azcarate-Peril
Transcriptional and functional ...
Bifidobacterium animalis subsp. lactis, Lactobacillus acidophilus, Lactobacillus acidophilus NCFM, Lactobacillus gasseri
Appl. Environ. Microbiol.
72
1891-1899
2006
1
-
3
-
1
-
-
-
-
-
-
2
-
14
-
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-
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-
4
-
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1
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3
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-
1
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2
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4
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-
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-
662253
Jonsson
Kinetic and mechanistic charac ...
Oxalobacter formigenes
J. Biol. Chem.
279
36003-36012
2004
-
-
-
1
3
-
2
-
-
-
1
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-
3
-
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1
-
-
-
-
-
1
1
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-
2
-
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-
-
1
-
-
-
-
-
-
1
3
-
-
2
1
-
-
-
1
-
-
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1
-
-
-
-
1
1
-
-
-
2
-
-
-
-
-
-
-
-
-
-
645962
Ricagno
Crystallization and preliminar ...
Oxalobacter formigenes
Acta Crystallogr. Sect. D
59
1276-1277
2003
-
-
-
1
-
-
-
-
-
-
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1
-
3
-
-
1
-
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-
-
-
1
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
1
-
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-
-
-
-
-
-
-
1
-
-
-
1
-
-
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-
1
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
645963
Ricagno
Formyl-CoA transferase enclose ...
Oxalobacter formigenes
EMBO J.
22
3210-3219
2003
-
-
1
1
-
-
-
-
-
-
-
1
-
4
-
-
1
1
-
3
-
-
4
1
-
-
-
-
-
-
-
-
-
-
-
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-
1
-
1
-
-
-
-
-
-
-
-
-
1
-
-
-
1
-
3
-
-
4
1
-
-
-
-
-
-
-
-
-
-
-
-
-
-
645961
Sidhu
DNA sequencing and expression ...
Oxalobacter formigenes
J. Bacteriol.
179
3378-3381
1997
-
-
1
-
-
-
-
-
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1
1
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4
-
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1
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3
1
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1
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1
1
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1
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3
1
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-
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-
-
-
-
-
-
-
-
-
-
645960
Baetz
-
Localization of oxalyl-coenzym ...
Oxalobacter formigenes, Oxalobacter formigenes OxB / ATCC 35274
Syst. Appl. Microbiol.
15
167-171
1992
-
-
-
-
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1
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2
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2
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1
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1
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1
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1
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1
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2
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-
-
-
-
-
-
-
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-
-
645959
Baetz
Purification and characterizat ...
Oxalobacter formigenes
J. Bacteriol.
172
3537-3540
1990
-
-
-
-
-
-
2
3
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2
1
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2
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1
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1
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3
1
1
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1
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1
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-
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2
-
3
-
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2
1
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1
-
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1
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3
1
1
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-
1
-
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1
-
-
-
-
-
-