KM Value [mM] | KM Value Maximum [mM] | Substrate | Comment | Organism | Structure |
---|---|---|---|---|---|
additional information | - |
additional information | binding kinetics, ligand-binding free energy calculations, modeling | Homo sapiens |
Localization | Comment | Organism | GeneOntology No. | Textmining |
---|---|---|---|---|
Golgi apparatus | - |
Homo sapiens | 5794 | - |
Natural Substrates | Organism | Comment (Nat. Sub.) | Natural Products | Comment (Nat. Pro.) | Rev. | Reac. |
---|---|---|---|---|---|---|
3'-phosphoadenylyl sulfate + [heparan sulfate]-glucosamine | Homo sapiens | - |
adenosine 3',5'-bisphosphate + [heparan sulfate]-N-sulfoglucosamine | - |
? |
Organism | UniProt | Comment | Textmining |
---|---|---|---|
Homo sapiens | - |
- |
- |
Reaction | Comment | Organism | Reaction ID |
---|---|---|---|
3'-phosphoadenylyl sulfate + [heparan sulfate]-glucosamine = adenosine 3',5'-bisphosphate + [heparan sulfate]-N-sulfoglucosamine | complex mechanism of GAG biosynthesis, mechanism of forward motion and hydrogen bond network analysis, overview | Homo sapiens |
Substrates | Comment Substrates | Organism | Products | Comment (Products) | Rev. | Reac. |
---|---|---|---|---|---|---|
3'-phosphoadenylyl sulfate + [heparan sulfate]-glucosamine | - |
Homo sapiens | adenosine 3',5'-bisphosphate + [heparan sulfate]-N-sulfoglucosamine | - |
? | |
additional information | substrate binding structures, overview | Homo sapiens | ? | - |
- |
Synonyms | Comment | Organism |
---|---|---|
GAG sulfotransferase | - |
Homo sapiens |
glycosaminoglycan sulfotransferase | - |
Homo sapiens |
NDST | - |
Homo sapiens |
General Information | Comment | Organism |
---|---|---|
malfunction | heparan sulfate (HS) is a sulfated polysaccharide that plays a key role in morphogenesis, physiology and pathogenesis. The biosynthesis of HS takes place in the Golgi apparatus by a group of enzymes that polymerize, epimerize and sulfate the sugar chain. This biosynthetic process introduces varying degrees of sulfate substitution, which are tightly regulated and directly dictate binding specificity to different cytokines, morphogens and growth factors. Molecular dynamics simulations to investigate the dynamics of substrate recognition of two glycosaminoglycan (GAG) sulfotransferases, N-deacetylase-N-sulfotransferase and 2-O-sulfotransferaseto the HS chain during the biosynthetic process. Fine-tuned complex mechanism of GAG biosynthesis | Homo sapiens |
additional information | sulfotransferases contain a conserved interspaced positively charged amino acid residues that form a patch which controls the protein-GAG binding equilibrium. The amphipathic random coil positions the putative charged active site residue side chains of Glu641 and Glu642 toward the center of the cleft, while the opposing region of the cleft contains side chains of residues required for binding, His716, Gln717 and His720, molecular dynamics simulations | Homo sapiens |
physiological function | NDST, the first modifying enzyme, removes the acetyl group from GlcNAc and adds a sulfate group, generating N-sulfoglucosamine (GlcNS). The generation of GlcNS introduces N-sulfated (NS) domains along the HS chain. When these NS domains are flanked by unmodified N-acetylated domains (NA domains) NA/NS domains are generated. This organization specifies different protein-binding motifs, overview | Homo sapiens |