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Literature summary for 2.7.7.106 extracted from

  • Ney, B.; Ahmed, F.; Carere, C.; Biswas, A.; Warden, A.; Morales, S.; Pandey, G.; Watt, S.; Oakeshott, J.; Taylor, M.; Stott, M.; Jackson, C.; Greening, C.
    The methanogenic redox cofactor F420 is widely synthesized by aerobic soil bacteria (2016), ISME J., 11, 125-137 .
    View publication on PubMedView publication on EuropePMC
Search for more literature for 2.7.7.106

Cloned(Commentary)

Cloned (Comment) Organism
gene fbiD, DNA and amino acid sequence determination and analysis, phylogenetic analysis and tree Afipia carboxidovorans

Natural Substrates/ Products (Substrates)

Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
3-phospho-D-glycerate + GTP Afipia carboxidovorans
-
 3-(D-glyceryl)-diphospho-5'-guanosine + diphosphate
-
 ?
3-phospho-D-glycerate + GTP Afipia carboxidovorans DSM 1227
-
 3-(D-glyceryl)-diphospho-5'-guanosine + diphosphate
-
 ?
3-phospho-D-glycerate + GTP Afipia carboxidovorans KCTC 32145
-
 3-(D-glyceryl)-diphospho-5'-guanosine + diphosphate
-
 ?
3-phospho-D-glycerate + GTP Afipia carboxidovorans OM5
-
 3-(D-glyceryl)-diphospho-5'-guanosine + diphosphate
-
 ?

Organism

Organism UniProt Comment Textmining
Afipia carboxidovorans B6JBS5
-
-
Afipia carboxidovorans DSM 1227 B6JBS5
-
-
Afipia carboxidovorans KCTC 32145 B6JBS5
-
-
Afipia carboxidovorans OM5 B6JBS5
-
-

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
3-phospho-D-glycerate + GTP
-
 Afipia carboxidovorans 3-(D-glyceryl)-diphospho-5'-guanosine + diphosphate
-
 ?
3-phospho-D-glycerate + GTP
-
 Afipia carboxidovorans DSM 1227 3-(D-glyceryl)-diphospho-5'-guanosine + diphosphate
-
 ?
3-phospho-D-glycerate + GTP
-
 Afipia carboxidovorans KCTC 32145 3-(D-glyceryl)-diphospho-5'-guanosine + diphosphate
-
 ?
3-phospho-D-glycerate + GTP
-
 Afipia carboxidovorans OM5 3-(D-glyceryl)-diphospho-5'-guanosine + diphosphate
-
 ?

Synonyms

Synonyms Comment Organism
fbiD
-
 Afipia carboxidovorans

General Information

General Information Comment Organism
evolution analysis of the evolution of the F420 biosynthesis enzymes (CofC, CofD, CofE, CofG and CofH) to understand the origin and distribution of the cofactor, phylogenetic analysis and tree, overview. F420 biosynthesis pathways evolved through bacterial-to-archaeal horizontal gene transfers Afipia carboxidovorans