Literature summary for 2.7.2.7 extracted from

Senger, R.S.; Papoutsakis, E.T.
Genome-scale model for Clostridium acetobutylicum: Part I. Metabolic network resolution and analysis (2008), Biotechnol. Bioeng., 101, 1036-1052.

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Protein Variants

Protein Variants	Comment	Organism
additional information	semi-automated reverse engineering algorithm. The reconstructed metabolic network was used to create a genome-scale model that correctly characterized the butyrate kinase knock-out and the asolventogenic M5 pSOL1 megaplasmid degenerate strains. Systematic gene knock-out simulations performed to identify a set of genes encoding clostridial enzymes essential for growth in silico.	Clostridium acetobutylicum

Natural Substrates/ Products (Substrates)

Natural Substrates	Organism	Comment (Nat. Sub.)	Natural Products	Comment (Nat. Pro.)	Rev.	Reac.
additional information	Clostridium acetobutylicum	semi-automated reverse engineering algorithm. The reconstructed metabolic network was used to create a genome-scale model that correctly characterized the butyrate kinase knock-out and the asolventogenic M5 pSOL1 megaplasmid degenerate strains. Systematic gene knock-out simulations performed to identify a set of genes encoding clostridial enzymes essential for growth in silico.	?	-	?

Organism

Organism	UniProt	Comment	Textmining
Clostridium acetobutylicum	-	strain ATCC 824	-

Substrates and Products (Substrate)

Substrates	Comment Substrates	Organism	Products	Comment (Products)	Rev.	Reac.
additional information	semi-automated reverse engineering algorithm. The reconstructed metabolic network was used to create a genome-scale model that correctly characterized the butyrate kinase knock-out and the asolventogenic M5 pSOL1 megaplasmid degenerate strains. Systematic gene knock-out simulations performed to identify a set of genes encoding clostridial enzymes essential for growth in silico.	Clostridium acetobutylicum	?	-	?

Synonyms

Synonyms	Comment	Organism
butyrate kinase	-	Clostridium acetobutylicum

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Release 2023.1 (January 2023)