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Literature summary for 2.7.11.23 extracted from

  • Phatnani, H.P.; Jones, J.C.; Greenleaf, A.L.
    Expanding the functional repertoire of CTD kinase I and RNA polymerase II: novel phosphoCTD-associating proteins in the yeast proteome (2004), Biochemistry, 43, 15702-15719.
    View publication on PubMedView publication on EuropePMC

Protein Variants

Protein Variants Comment Organism
additional information the ctk1DELTA cells are defective in splicing Saccharomyces cerevisiae

Localization

Localization Comment Organism GeneOntology No. Textmining
nucleus
-
Saccharomyces cerevisiae 5634
-

Natural Substrates/ Products (Substrates)

Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
ATP + [DNA-directed RNA polymerase] Saccharomyces cerevisiae hyperphosphorylation of the C-terminal repeat domain CTD of the RNA polymerase II large subunit is required for elongation of mRNA, the enzyme is involved in functional organization of transcription and nuclear metabolism ADP + phospho-[DNA-directed RNA polymerase]
-
?

Organism

Organism UniProt Comment Textmining
Saccharomyces cerevisiae
-
gene ctk1
-

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
ATP + [DNA-directed RNA polymerase] hyperphosphorylation of the C-terminal repeat domain CTD of the RNA polymerase II large subunit is required for elongation of mRNA, the enzyme is involved in functional organization of transcription and nuclear metabolism Saccharomyces cerevisiae ADP + phospho-[DNA-directed RNA polymerase]
-
?
ATP + [DNA-directed RNA polymerase] CTD kinase 1 hyperphosphorylates the C-terminal repeat domain CTD of the RNA polymerase II large subunit, phosphorylation of CTD leads to interaction/binding of several proteins with nuclear functions in vitro, i.e. phosphoCTD-associating proteins, purification and analysis of PCAPs, e.g. Ess1, Hrr25, Prp40, Ssd1, SSd1, and Set2, overview Saccharomyces cerevisiae ADP + phospho-[DNA-directed RNA polymerase]
-
?

Synonyms

Synonyms Comment Organism
CTD kinase I
-
Saccharomyces cerevisiae
Ctdk-1
-
Saccharomyces cerevisiae

Cofactor

Cofactor Comment Organism Structure
ATP
-
Saccharomyces cerevisiae