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Literature summary for 2.3.2.2 extracted from

  • Bindal, S.; Sharma, S.; Singh, T.P.; Gupta, R.
    Evolving transpeptidase and hydrolytic variants of gamma-glutamyl transpeptidase from Bacillus licheniformis by targeted mutations of conserved residue Arg109 and their biotechnological relevance (2017), J. Biotechnol., 249, 82-90 .
    View publication on PubMed

Cloned(Commentary)

Cloned (Comment) Organism
gene ggt, sequence comparisons, recombinant expression of Strep-tagged wild-type and mutant enzymes in Escherichia coli strain BL21(DE3) Bacillus licheniformis

Protein Variants

Protein Variants Comment Organism
R109E site-directed mutagenesis, the mutation reduces the enzyme's affinity for L-Gln Bacillus licheniformis
R109F site-directed mutagenesis, the mutation reduces the enzyme's affinity for L-Gln Bacillus licheniformis
R109K site-directed mutagenesis of the catalytic residue results in low enzyme consumption, the mutation reduces the enzyme's affinity for L-Gln. The Arg109Lys mutant has increased transpeptidation activity and catalytic efficiency compared to the other R109 mutants. The Arg109Lys mutant shows high conversion rates for L-theanine synthesis as well Bacillus licheniformis
R109L site-directed mutagenesis, the mutation reduces the enzyme's affinity for L-Gln, highly reduced transpeptidase activity compared to wild-type Bacillus licheniformis
R109M site-directed mutagenesis of the catalytic residue results in reduced activity and high salt stability of the mutant, the mutation reduces the enzyme's affinity for L-Gln. The Arg109Met mutant shows increased hydrolytic activity as it completely alters the binding of L-Gln at the active site. Also, the salt stability of the mutant enzyme is significantly improved. Highly reduced transpeptidase activity compared to wild-type Bacillus licheniformis
R109S site-directed mutagenesis, the mutation reduces the enzyme's affinity for L-Gln Bacillus licheniformis

Inhibitors

Inhibitors Comment Organism Structure
NaCl
-
Bacillus licheniformis

KM Value [mM]

KM Value [mM] KM Value Maximum [mM] Substrate Comment Organism Structure
additional information
-
additional information enzyme kinetics analysis is done according to the ping-pong mechanism when both the substrates L-gamma-glutamyl-4-nitroanilide and glycyl-glycine are used Bacillus licheniformis
0.3
-
L-gamma-glutamyl-4-nitroanilide recombinant mutant R109F, pH 9.0, 60°C Bacillus licheniformis
0.4
-
L-gamma-glutamyl-4-nitroanilide recombinant mutant R109E, pH 9.0, 60°C Bacillus licheniformis
0.4
-
L-gamma-glutamyl-4-nitroanilide recombinant mutant R109S, pH 9.0, 60°C Bacillus licheniformis
0.4
-
L-gamma-glutamyl-4-nitroanilide recombinant wild-type enzyme, pH 9.0, 60°C Bacillus licheniformis
0.7
-
glycylglycine recombinant mutant R109E, pH 9.0, 60°C Bacillus licheniformis
0.7
-
L-gamma-glutamyl-4-nitroanilide recombinant mutant R109K, pH 9.0, 60°C Bacillus licheniformis
0.8
-
glycylglycine recombinant mutant R109F, pH 9.0, 60°C Bacillus licheniformis
0.94
-
glycylglycine recombinant wild-type enzyme, pH 9.0, 60°C Bacillus licheniformis
1.5
-
glycylglycine recombinant mutant R109K, pH 9.0, 60°C Bacillus licheniformis
1.6
-
glycylglycine recombinant mutant R109S, pH 9.0, 60°C Bacillus licheniformis
8.2
-
L-gamma-glutamyl-4-nitroanilide recombinant mutant R109L, pH 9.0, 60°C Bacillus licheniformis
10.6
-
L-gamma-glutamyl-4-nitroanilide recombinant mutant R109M, pH 9.0, 60°C Bacillus licheniformis

Natural Substrates/ Products (Substrates)

Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
a (5-L-glutamyl)-peptide + an amino acid Bacillus licheniformis
-
a peptide + a 5-L-glutamyl amino acid
-
?
a (5-L-glutamyl)-peptide + an amino acid Bacillus licheniformis ER-15
-
a peptide + a 5-L-glutamyl amino acid
-
?
a (5-L-glutamyl)-peptide + an amino acid Bacillus licheniformis ER15
-
a peptide + a 5-L-glutamyl amino acid
-
?

Organism

Organism UniProt Comment Textmining
Bacillus licheniformis A9YTT0
-
-
Bacillus licheniformis ER15 A9YTT0
-
-

Purification (Commentary)

Purification (Comment) Organism
recombinant Strep-tagged wild-type and mutant enzymes from Escherichia coli strain BL21(DE3) by affinity chromatography and ultrafiltration, to homogeneity Bacillus licheniformis

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
a (5-L-glutamyl)-peptide + an amino acid
-
Bacillus licheniformis a peptide + a 5-L-glutamyl amino acid
-
?
a (5-L-glutamyl)-peptide + an amino acid
-
Bacillus licheniformis ER-15 a peptide + a 5-L-glutamyl amino acid
-
?
a (5-L-glutamyl)-peptide + an amino acid
-
Bacillus licheniformis ER15 a peptide + a 5-L-glutamyl amino acid
-
?
L-gamma-glutamyl-4-nitroanilide + glycylglycine
-
Bacillus licheniformis 4-nitroaniline + 5-L-glutamyl-glycylglycine
-
?
L-gamma-glutamyl-4-nitroanilide + glycylglycine
-
Bacillus licheniformis ER-15 4-nitroaniline + 5-L-glutamyl-glycylglycine
-
?
L-gamma-glutamyl-4-nitroanilide + glycylglycine
-
Bacillus licheniformis ER15 4-nitroaniline + 5-L-glutamyl-glycylglycine
-
?
L-glutamine + ethylamine formation of gamma-glutamylethylamine (L-theanine) Bacillus licheniformis NH3 + gamma-glutamylethylamine
-
?
L-glutamine + ethylamine formation of gamma-glutamylethylamine (L-theanine) Bacillus licheniformis ER-15 NH3 + gamma-glutamylethylamine
-
?
L-glutamine + ethylamine formation of gamma-glutamylethylamine (L-theanine) Bacillus licheniformis ER15 NH3 + gamma-glutamylethylamine
-
?
additional information GGT is known to catalyze three types of reactions: (a) transpeptidation- when the acceptor is an NH2- group containing compound to which GGT can transfer the gamma-glutamyl moiety, (b) hydrolysis- when gamma-glutamyl moiety is transferred to a water molecule and glutamic acid is released as a product and (c) auto-transpeptidation- when the free NH2- group of a donor acts as an acceptor itself. Amino acid acceptor substrate specificity, overview Bacillus licheniformis ?
-
-
additional information GGT is known to catalyze three types of reactions: (a) transpeptidation- when the acceptor is an NH2- group containing compound to which GGT can transfer the gamma-glutamyl moiety, (b) hydrolysis- when gamma-glutamyl moiety is transferred to a water molecule and glutamic acid is released as a product and (c) auto-transpeptidation- when the free NH2- group of a donor acts as an acceptor itself. Amino acid acceptor substrate specificity, overview Bacillus licheniformis ER-15 ?
-
-
additional information GGT is known to catalyze three types of reactions: (a) transpeptidation- when the acceptor is an NH2- group containing compound to which GGT can transfer the gamma-glutamyl moiety, (b) hydrolysis- when gamma-glutamyl moiety is transferred to a water molecule and glutamic acid is released as a product and (c) auto-transpeptidation- when the free NH2- group of a donor acts as an acceptor itself. Amino acid acceptor substrate specificity, overview Bacillus licheniformis ER15 ?
-
-

Subunits

Subunits Comment Organism
heterodimer 1 * 45000, large subunit, + 1 * 22000, small subunit, His6-tagged enzyme, SDS-PAGE Bacillus licheniformis

Synonyms

Synonyms Comment Organism
BlGGT
-
Bacillus licheniformis
gamma-glutamyl transpeptidase
-
Bacillus licheniformis
GGT
-
Bacillus licheniformis

Temperature Optimum [°C]

Temperature Optimum [°C] Temperature Optimum Maximum [°C] Comment Organism
60
-
recombinant enzyme mutants R109K and R109M Bacillus licheniformis
70
-
recombinant wild-type enzyme Bacillus licheniformis

Turnover Number [1/s]

Turnover Number Minimum [1/s] Turnover Number Maximum [1/s] Substrate Comment Organism Structure
1.7
-
L-gamma-glutamyl-4-nitroanilide recombinant mutant R109E, pH 9.0, 60°C Bacillus licheniformis
1.7
-
L-gamma-glutamyl-4-nitroanilide recombinant mutant R109F, pH 9.0, 60°C Bacillus licheniformis
8.3
-
L-gamma-glutamyl-4-nitroanilide recombinant mutant R109L, pH 9.0, 60°C Bacillus licheniformis
21.7
-
L-gamma-glutamyl-4-nitroanilide recombinant mutant R109M, pH 9.0, 60°C Bacillus licheniformis
95
-
L-gamma-glutamyl-4-nitroanilide recombinant mutant R109S, pH 9.0, 60°C Bacillus licheniformis
106.7
-
L-gamma-glutamyl-4-nitroanilide recombinant wild-type enzyme, pH 9.0, 60°C Bacillus licheniformis
305
-
L-gamma-glutamyl-4-nitroanilide recombinant mutant R109K, pH 9.0, 60°C Bacillus licheniformis

pH Optimum

pH Optimum Minimum pH Optimum Maximum Comment Organism
8
-
recombinant enzyme mutant R109M Bacillus licheniformis
9
-
recombinant enzyme mutants R109S and R109K Bacillus licheniformis
9 10 recombinant wild-type enzyme Bacillus licheniformis

General Information

General Information Comment Organism
evolution gamma-glutamyl transpeptidase enzyme (GGT) is a member of the N-terminal nucleophile hydrolase superfamily Bacillus licheniformis
additional information GGT enzymes follow a ping-pong mechanism of enzyme catalysis wherein the second substrate binds only when the first substrate is already bound to the enzyme and forms an enzyme-substrate complex. The C-alpha carboxyl group interacts with Arg109, Ser460 and Ser461 and the C-alpha amino group forms contacts with Glu438 and Asp441 while the side chain carboxylic group is oriented towards Thr399, Gly481, and Gly482. Arg109 interacts with C-alpha carboxyl group of the substrate Bacillus licheniformis
physiological function gamma-glutamyl transpeptidase (GGT) catalyzes the transfer of the gamma-glutamyl moiety from donor compounds such as L-glutamine (Gln) and glutathione (GSH) to an acceptor Bacillus licheniformis

kcat/KM [mM/s]

kcat/KM Value [1/mMs-1] kcat/KM Value Maximum [1/mMs-1] Substrate Comment Organism Structure
1.01
-
L-gamma-glutamyl-4-nitroanilide recombinant mutant R109L, pH 9.0, 60°C Bacillus licheniformis
2.05
-
L-gamma-glutamyl-4-nitroanilide recombinant mutant R109M, pH 9.0, 60°C Bacillus licheniformis
4.25
-
L-gamma-glutamyl-4-nitroanilide recombinant mutant R109E, pH 9.0, 60°C Bacillus licheniformis
5.67
-
L-gamma-glutamyl-4-nitroanilide recombinant mutant R109F, pH 9.0, 60°C Bacillus licheniformis
237.5
-
L-gamma-glutamyl-4-nitroanilide recombinant mutant R109S, pH 9.0, 60°C Bacillus licheniformis
266.75
-
L-gamma-glutamyl-4-nitroanilide recombinant wild-type enzyme, pH 9.0, 60°C Bacillus licheniformis
435.7
-
L-gamma-glutamyl-4-nitroanilide recombinant mutant R109K, pH 9.0, 60°C Bacillus licheniformis