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Literature summary for 2.3.1.286 extracted from

  • Zhao, K.; Chai, X.; Marmorstein, R.
    Structure and substrate binding properties of cobB, a Sir2 homolog protein deacetylase from Escherichia coli (2004), J. Mol. Biol., 337, 731-741 .
    View publication on PubMed

Cloned(Commentary)

Cloned (Comment) Organism
expressed in Escherichia coli BL21(DE3) and B834 (DE3) cells Escherichia coli

Crystallization (Commentary)

Crystallization (Comment) Organism
native and selenomethionine-derivatized enzyme in complex with an 11-residue peptide containing residues 12-19 of histone H4 and acetylated at lysine 16, hanging drop vapor diffusion method, using Escherichia coli

Metals/Ions

Metals/Ions Comment Organism Structure
Zn2+ the small domain contains a structural zinc ion Escherichia coli

Organism

Organism UniProt Comment Textmining
Escherichia coli P75960
-
-

Purification (Commentary)

Purification (Comment) Organism
Q-Sepharose column chromatography and Superdex 75 gel filtration Escherichia coli

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
[Acs protein]-N6-acetyl-L-lysine609 + NAD+ + H2O
-
Escherichia coli [Acs protein]-L-lysine609 + 2''-O-acetyl-ADP-D-ribose + nicotinamide
-
?
[histone H4]-N6-acetyl-L-lysine16 + NAD+ + H2O KGGAAc-KRHRKIL Escherichia coli [histone H4]-L-lysine16 + 2''-O-acetyl-ADP-D-ribose + nicotinamide
-
?
[p53 peptide]-N6-acetyl-L-lysine382 + NAD+ + H2O
-
Escherichia coli [p53 peptide]-L-lysine382 + 2''-O-acetyl-ADP-D-ribose + nicotinamide
-
?

Synonyms

Synonyms Comment Organism
CobB
-
Escherichia coli
Sir2
-
Escherichia coli

Cofactor

Cofactor Comment Organism Structure
NAD+
-
Escherichia coli