General Stability | Organism |
---|---|
dodecanethiol stabilizes most effectively | [Candida] boidinii |
dodecanethiol stabilizes most effectively | Ogataea angusta |
Mg2+ or EDTA stablizes | [Candida] boidinii |
Mg2+ or EDTA stablizes | Ogataea angusta |
Inhibitors | Comment | Organism | Structure |
---|---|---|---|
Co2+ | 0.1 mM | [Candida] boidinii | |
Co2+ | 0.1 mM | Ogataea angusta | |
formaldehyde | - |
[Candida] boidinii | |
GSH | - |
[Candida] boidinii | |
Mn2+ | 0.1 mM | [Candida] boidinii | |
Mn2+ | 0.1 mM | Ogataea angusta | |
NEM | - |
[Candida] boidinii | |
Zn2+ | 0.1 mM | [Candida] boidinii | |
Zn2+ | 0.1 mM | Ogataea angusta |
Localization | Comment | Organism | GeneOntology No. | Textmining |
---|---|---|---|---|
peroxisome | - |
[Candida] boidinii | 5777 | - |
peroxisome | - |
Ogataea angusta | 5777 | - |
Metals/Ions | Comment | Organism | Structure |
---|---|---|---|
Mg2+ | activation | [Candida] boidinii | |
additional information | - |
Ogataea angusta | |
additional information | no activation by Ca2+ | [Candida] boidinii | |
additional information | no metal cations | [Candida] boidinii |
Molecular Weight [Da] | Molecular Weight Maximum [Da] | Comment | Organism |
---|---|---|---|
76000 | - |
alpha2, 2 * 76000, SDS-PAGE | [Candida] boidinii |
145000 | - |
gel filtration | [Candida] boidinii |
145000 | - |
PAGE | [Candida] boidinii |
Natural Substrates | Organism | Comment (Nat. Sub.) | Natural Products | Comment (Nat. Pro.) | Rev. | Reac. |
---|---|---|---|---|---|---|
D-xylulose 5-phosphate + formaldehyde | [Candida] boidinii | first step in formaldehyde assimilation via xylulose monophosphate (dihydroxyacetone) cycle | glyceraldehyde 3-phosphate + dihydroxyacetone | i.e. 1,3-dihydroxy-2-propanone | ? | |
D-xylulose 5-phosphate + formaldehyde | Ogataea angusta | first step in formaldehyde assimilation via xylulose monophosphate (dihydroxyacetone) cycle | glyceraldehyde 3-phosphate + dihydroxyacetone | i.e. 1,3-dihydroxy-2-propanone | ? | |
D-xylulose 5-phosphate + formaldehyde | [Candida] boidinii KD1 | first step in formaldehyde assimilation via xylulose monophosphate (dihydroxyacetone) cycle | glyceraldehyde 3-phosphate + dihydroxyacetone | i.e. 1,3-dihydroxy-2-propanone | ? | |
D-xylulose 5-phosphate + formaldehyde | Ogataea angusta DL-1 | first step in formaldehyde assimilation via xylulose monophosphate (dihydroxyacetone) cycle | glyceraldehyde 3-phosphate + dihydroxyacetone | i.e. 1,3-dihydroxy-2-propanone | ? |
Organism | UniProt | Comment | Textmining |
---|---|---|---|
Ogataea angusta | - |
methanol-grown | - |
Ogataea angusta DL-1 | - |
methanol-grown | - |
[Candida] boidinii | - |
- |
- |
[Candida] boidinii | - |
methanol grown | - |
[Candida] boidinii KD1 | - |
- |
- |
Purification (Comment) | Organism |
---|---|
- |
[Candida] boidinii |
- |
Ogataea angusta |
Specific Activity Minimum [µmol/min/mg] | Specific Activity Maximum [µmol/min/mg] | Comment | Organism |
---|---|---|---|
4.1 | - |
- |
[Candida] boidinii |
Storage Stability | Organism |
---|---|
4°C, at least 2-3 weeks under 1 ml dodecanethiol | [Candida] boidinii |
4°C, at least 2-3 weeks under 1 ml dodecanethiol | Ogataea angusta |
4°C, inactivation within a few h in the absence of dodecanethiol | [Candida] boidinii |
4°C, inactivation within a few h in the absence of dodecanethiol | Ogataea angusta |
Substrates | Comment Substrates | Organism | Products | Comment (Products) | Rev. | Reac. |
---|---|---|---|---|---|---|
D-xylulose 5-phosphate + D-glyceraldehyde | - |
[Candida] boidinii | glyceraldehyde 3-phosphate + D-xylulose | - |
? | |
D-xylulose 5-phosphate + D-glyceraldehyde | - |
[Candida] boidinii KD1 | glyceraldehyde 3-phosphate + D-xylulose | - |
? | |
D-xylulose 5-phosphate + formaldehyde | - |
[Candida] boidinii | glyceraldehyde 3-phosphate + dihydroxyacetone | i.e. 1,3-dihydroxy-2-propanone | ? | |
D-xylulose 5-phosphate + formaldehyde | - |
Ogataea angusta | glyceraldehyde 3-phosphate + dihydroxyacetone | i.e. 1,3-dihydroxy-2-propanone | ? | |
D-xylulose 5-phosphate + formaldehyde | first step in formaldehyde assimilation via xylulose monophosphate (dihydroxyacetone) cycle | [Candida] boidinii | glyceraldehyde 3-phosphate + dihydroxyacetone | i.e. 1,3-dihydroxy-2-propanone | ? | |
D-xylulose 5-phosphate + formaldehyde | first step in formaldehyde assimilation via xylulose monophosphate (dihydroxyacetone) cycle | Ogataea angusta | glyceraldehyde 3-phosphate + dihydroxyacetone | i.e. 1,3-dihydroxy-2-propanone | ? | |
D-xylulose 5-phosphate + formaldehyde | - |
[Candida] boidinii KD1 | glyceraldehyde 3-phosphate + dihydroxyacetone | i.e. 1,3-dihydroxy-2-propanone | ? | |
D-xylulose 5-phosphate + formaldehyde | first step in formaldehyde assimilation via xylulose monophosphate (dihydroxyacetone) cycle | [Candida] boidinii KD1 | glyceraldehyde 3-phosphate + dihydroxyacetone | i.e. 1,3-dihydroxy-2-propanone | ? | |
D-xylulose 5-phosphate + formaldehyde | - |
Ogataea angusta DL-1 | glyceraldehyde 3-phosphate + dihydroxyacetone | i.e. 1,3-dihydroxy-2-propanone | ? | |
D-xylulose 5-phosphate + formaldehyde | first step in formaldehyde assimilation via xylulose monophosphate (dihydroxyacetone) cycle | Ogataea angusta DL-1 | glyceraldehyde 3-phosphate + dihydroxyacetone | i.e. 1,3-dihydroxy-2-propanone | ? | |
D-xylulose 5-phosphate + glycolaldehyde | - |
[Candida] boidinii | glyceraldehyde 3-phosphate + 1,3,5-trihydroxypentane-2-one | - |
? | |
D-xylulose 5-phosphate + glycolaldehyde | - |
[Candida] boidinii KD1 | glyceraldehyde 3-phosphate + 1,3,5-trihydroxypentane-2-one | - |
? | |
D-xylulose 5-phosphate + ribose 5-phosphate | - |
[Candida] boidinii | glyceraldehyde 3-phosphate + sedoheptulose 7-phosphate | - |
? | |
D-xylulose 5-phosphate + ribose 5-phosphate | - |
[Candida] boidinii KD1 | glyceraldehyde 3-phosphate + sedoheptulose 7-phosphate | - |
? | |
fructose 6-phosphate + formaldehyde | - |
[Candida] boidinii | dihydroxyacetone + erythrose 4-phosphate | - |
? | |
fructose 6-phosphate + formaldehyde | - |
Ogataea angusta | dihydroxyacetone + erythrose 4-phosphate | - |
? | |
fructose 6-phosphate + formaldehyde | - |
Ogataea angusta DL-1 | dihydroxyacetone + erythrose 4-phosphate | - |
? | |
hydroxypyruvate + formaldehyde | - |
[Candida] boidinii | CO2 + dihydroxyacetone | - |
? | |
sedoheptulose 7-phosphate + formaldehyde | - |
[Candida] boidinii | dihydroxyacetone + ribose | - |
? |
Subunits | Comment | Organism |
---|---|---|
dimer | alpha2, 2 * 76000, SDS-PAGE | [Candida] boidinii |
pH Optimum Minimum | pH Optimum Maximum | Comment | Organism |
---|---|---|---|
additional information | - |
pI: 7.1 | [Candida] boidinii |
6.8 | 7.1 | - |
[Candida] boidinii |
Cofactor | Comment | Organism | Structure |
---|---|---|---|
thiamine diphosphate | tightly bound | [Candida] boidinii |