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Literature summary for 2.1.1.B140 extracted from

  • Liu, Y.; Martinez, A.; Yamashita, S.; Tomita, K.
    Crystal structure of human cytoplasmic tRNAHis-specific 5'-monomethylphosphate capping enzyme (2020), Nucleic Acids Res., 48, 1572-1582 .
    View publication on PubMedView publication on EuropePMC

Cloned(Commentary)

Cloned (Comment) Organism
expressed in Escherichia coli BL21(DE3) cells Homo sapiens

Crystallization (Commentary)

Crystallization (Comment) Organism
sitting drop vapor diffusion method, using 20% (w/v) PEG 3350 and 200 mM CaCl2 Homo sapiens

Protein Variants

Protein Variants Comment Organism
D110A the mutant shows severely reduced activity compared to the wild type enzyme Homo sapiens
D135A the mutant shows severely reduced activity compared to the wild type enzyme Homo sapiens
D72A the mutant shows severely reduced activity compared to the wild type enzyme Homo sapiens
D72A/G74A the mutant shows severely reduced activity compared to the wild type enzyme Homo sapiens
F136G the mutant shows severely reduced activity compared to the wild type enzyme Homo sapiens
F40A inactive Homo sapiens
G74A the mutant shows severely reduced activity compared to the wild type enzyme Homo sapiens
I111G the mutant shows severely reduced activity compared to the wild type enzyme Homo sapiens
I166G the mutant shows severely reduced activity compared to the wild type enzyme Homo sapiens
K201A the mutant shows severely reduced activity compared to the wild type enzyme Homo sapiens
N76A the mutant shows severely reduced activity compared to the wild type enzyme Homo sapiens
Q198A the mutant shows severely reduced activity compared to the wild type enzyme Homo sapiens
R118A the mutant shows reduced activity compared to the wild type enzyme Homo sapiens
R204A the mutant shows severely reduced activity compared to the wild type enzyme Homo sapiens
R208A the mutant shows severely reduced activity compared to the wild type enzyme Homo sapiens
R208A/R209A the mutant shows severely reduced activity compared to the wild type enzyme Homo sapiens
R211A the mutant shows severely reduced activity compared to the wild type enzyme Homo sapiens
R211A/R212A inactive Homo sapiens
R212A the mutant shows severely reduced activity compared to the wild type enzyme Homo sapiens
R257A the mutant shows severely reduced activity compared to the wild type enzyme Homo sapiens
R46A the mutant shows severely reduced activity compared to the wild type enzyme Homo sapiens
S165A the mutant shows severely reduced activity compared to the wild type enzyme Homo sapiens
W169F the mutant shows severely reduced activity compared to the wild type enzyme Homo sapiens
Y37A the mutant shows severely reduced activity compared to the wild type enzyme Homo sapiens
Y37F inactive Homo sapiens

Localization

Localization Comment Organism GeneOntology No. Textmining
cytoplasm
-
Homo sapiens 5737
-

Metals/Ions

Metals/Ions Comment Organism Structure
Mg2+ 5 mM used in assay conditions Homo sapiens

Natural Substrates/ Products (Substrates)

Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
tRNAHis + S-adenosyl-L-methionine Homo sapiens
-
methylated tRNAHis + S-adenosyl-L-homocysteine
-
?

Organism

Organism UniProt Comment Textmining
Homo sapiens Q7Z5W3
-
-

Purification (Commentary)

Purification (Comment) Organism
Ni-NTA agarose column chromatography, HiTrap heparin column chromatography, and Superdex 200 gel filtration Homo sapiens

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
additional information the enzyme cannot methylate a tRNAHis mutant with a 5'-triphosphate group at its 5'-end in vitro Homo sapiens ?
-
-
tRNAHis + S-adenosyl-L-methionine
-
Homo sapiens methylated tRNAHis + S-adenosyl-L-homocysteine
-
?

Synonyms

Synonyms Comment Organism
BCDIN3D
-
Homo sapiens
tRNAHis-specific 5'-monomethylphosphate capping enzyme
-
Homo sapiens