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Literature summary for 2.1.1.269 extracted from

  • Varaljay, V.A.; Robidart, J.; Preston, C.M.; Gifford, S.M.; Durham, B.P.; Burns, A.S.; Ryan, J.P.; Marin, R.; Kiene, R.P.; Zehr, J.P.; Scholin, C.A.; Moran, M.A.
    Single-taxon field measurements of bacterial gene regulation controlling DMSP fate (2015), ISME J., 9, 1677-1686.
    View publication on PubMedView publication on EuropePMC
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Cloned(Commentary)

Cloned (Comment) Organism
gene dmdA, genotyping and expression analysis Ruegeria pomeroyi
gene dmdA, genotyping and expression analysis in relation to the phytoplankton dynamics in Monterey Bay Roseobacter sp.

Organism

Organism UniProt Comment Textmining
Roseobacter sp.
-
 from Monterey Bay, Canada, gene dmdA
-
Roseobacter sp. HTCC 2255
-
 from Monterey Bay, Canada, gene dmdA
-
Ruegeria pomeroyi
-
 from Monterey Bay, Canada, gene dmdA
-

General Information

General Information Comment Organism
evolution detection of taxon-specific gene expression in Roseobacter sp. HTCC2255 and in situ regulation of the first gene in each DMSP pathway, gene dddP and gene dmdA, that corresponds with shifts in the taxonomy of the phytoplankton community Roseobacter sp.
metabolism the bacterial switch is a proposed regulatory point in the global sulfur cycle that routes dimethylsulfoniopropionate to two fundamentally different fates in seawater through genes encoding either the cleavage or demethylation pathway, and affects the flux of volatile sulfur from ocean surface waters to the atmosphere Roseobacter sp.
metabolism the bacterial switch is a proposed regulatory point in the global sulfur cycle that routes dimethylsulfoniopropionate to two fundamentally different fates in seawater through genes encoding either the cleavage or demethylation pathway, and affects the flux of volatile sulfur from ocean surface waters to the atmosphere Ruegeria pomeroyi
additional information positive correlation of katG expression with gene dmdA but not gene dddP during the period when regulation expression is uncoupled Ruegeria pomeroyi