BRENDA - Enzyme Database
show all sequences of 1.8.5.4

Purification and characterization of sulfide:quinone oxidoreductase from an acidophilic iron-oxidizing bacterium, Acidithiobacillus ferrooxidans

Wakai, S.; Tsujita, M.; Kikumoto, M.; Manchur, M.A.; Kanao, T.; Kamimura, K.; Biosci. Biotechnol. Biochem. 71, 2735-2742 (2007)

Data extracted from this reference:

Cloned(Commentary)
Commentary
Organism
expressed in Escherichia coli BL21(DE3) or Rosetta-gami(DE3) cells as a thioredoxin-fusion protein in inclusion bodies in an inactive form
Acidithiobacillus ferrooxidans
Inhibitors
Inhibitors
Commentary
Organism
Structure
2-n-heptyl-4-hydroxy-quinone-N-oxide
-
Acidithiobacillus ferrooxidans
antimycin A
-
Acidithiobacillus ferrooxidans
cyanide
-
Acidithiobacillus ferrooxidans
Myxothiazol
-
Acidithiobacillus ferrooxidans
KM Value [mM]
KM Value [mM]
KM Value Maximum [mM]
Substrate
Commentary
Organism
Structure
0.014
-
ubiquinone-2
apparent value, at pH 7.0, temperature not specified in the publication
Acidithiobacillus ferrooxidans
0.042
-
Sulfide
apparent value, at pH 7.0, temperature not specified in the publication
Acidithiobacillus ferrooxidans
Localization
Localization
Commentary
Organism
GeneOntology No.
Textmining
membrane
-
Acidithiobacillus ferrooxidans
16020
-
Molecular Weight [Da]
Molecular Weight [Da]
Molecular Weight Maximum [Da]
Commentary
Organism
47000
-
x * 47000, SDS-PAGE
Acidithiobacillus ferrooxidans
47290
-
x * 47290, deduced from amino acid sequence
Acidithiobacillus ferrooxidans
60000
65000
native enzyme, gel filtration
Acidithiobacillus ferrooxidans
Organism
Organism
Primary Accession No. (UniProt)
Commentary
Textmining
Acidithiobacillus ferrooxidans
-
-
-
Acidithiobacillus ferrooxidans NASF-1
-
-
-
Purification (Commentary)
Commentary
Organism
ammonium sulfate precipitation, phenyl-Toyopearl column chromatography, and TSKgel G3000 gel filtration
Acidithiobacillus ferrooxidans
Source Tissue
Source Tissue
Commentary
Organism
Textmining
culture condition:sulfur-grown cell
-
Acidithiobacillus ferrooxidans
-
Specific Activity [micromol/min/mg]
Specific Activity Minimum [Ámol/min/mg]
Specific Activity Maximum [Ámol/min/mg]
Commentary
Organism
0.11
-
cell-free extract, at pH 7.0, temperature not specified in the publication
Acidithiobacillus ferrooxidans
20.55
-
after 186.8fold purification, at pH 7.0, temperature not specified in the publication
Acidithiobacillus ferrooxidans
Substrates and Products (Substrate)
Substrates
Commentary Substrates
Literature (Substrates)
Organism
Products
Commentary (Products)
Literature (Products)
Organism (Products)
Reversibility
sulfide + ubiquinone-2
-
714519
Acidithiobacillus ferrooxidans
sulfur + ubiquinol-2
-
-
-
?
sulfide + ubiquinone-2
-
714519
Acidithiobacillus ferrooxidans NASF-1
sulfur + ubiquinol-2
-
-
-
?
Subunits
Subunits
Commentary
Organism
?
x * 47000, SDS-PAGE; x * 47290, deduced from amino acid sequence
Acidithiobacillus ferrooxidans
pH Optimum
pH Optimum Minimum
pH Optimum Maximum
Commentary
Organism
7
-
-
Acidithiobacillus ferrooxidans
Cofactor
Cofactor
Commentary
Organism
Structure
FAD
-
Acidithiobacillus ferrooxidans
pI Value
Organism
Commentary
pI Value Maximum
pI Value
Acidithiobacillus ferrooxidans
deduced from amino acid sequence
-
6.5
IC50 Value
IC50 Value
IC50 Value Maximum
Commentary
Organism
Inhibitor
Structure
0.039
-
at pH 7.0, temperature not specified in the publication
Acidithiobacillus ferrooxidans
Myxothiazol
0.05
-
at pH 7.0, temperature not specified in the publication
Acidithiobacillus ferrooxidans
2-n-heptyl-4-hydroxy-quinone-N-oxide
0.22
-
at pH 7.0, temperature not specified in the publication
Acidithiobacillus ferrooxidans
antimycin A
0.54
-
at pH 7.0, temperature not specified in the publication
Acidithiobacillus ferrooxidans
cyanide
Cloned(Commentary) (protein specific)
Commentary
Organism
expressed in Escherichia coli BL21(DE3) or Rosetta-gami(DE3) cells as a thioredoxin-fusion protein in inclusion bodies in an inactive form
Acidithiobacillus ferrooxidans
Cofactor (protein specific)
Cofactor
Commentary
Organism
Structure
FAD
-
Acidithiobacillus ferrooxidans
IC50 Value (protein specific)
IC50 Value
IC50 Value Maximum
Commentary
Organism
Inhibitor
Structure
0.039
-
at pH 7.0, temperature not specified in the publication
Acidithiobacillus ferrooxidans
Myxothiazol
0.05
-
at pH 7.0, temperature not specified in the publication
Acidithiobacillus ferrooxidans
2-n-heptyl-4-hydroxy-quinone-N-oxide
0.22
-
at pH 7.0, temperature not specified in the publication
Acidithiobacillus ferrooxidans
antimycin A
0.54
-
at pH 7.0, temperature not specified in the publication
Acidithiobacillus ferrooxidans
cyanide
Inhibitors (protein specific)
Inhibitors
Commentary
Organism
Structure
2-n-heptyl-4-hydroxy-quinone-N-oxide
-
Acidithiobacillus ferrooxidans
antimycin A
-
Acidithiobacillus ferrooxidans
cyanide
-
Acidithiobacillus ferrooxidans
Myxothiazol
-
Acidithiobacillus ferrooxidans
KM Value [mM] (protein specific)
KM Value [mM]
KM Value Maximum [mM]
Substrate
Commentary
Organism
Structure
0.014
-
ubiquinone-2
apparent value, at pH 7.0, temperature not specified in the publication
Acidithiobacillus ferrooxidans
0.042
-
Sulfide
apparent value, at pH 7.0, temperature not specified in the publication
Acidithiobacillus ferrooxidans
Localization (protein specific)
Localization
Commentary
Organism
GeneOntology No.
Textmining
membrane
-
Acidithiobacillus ferrooxidans
16020
-
Molecular Weight [Da] (protein specific)
Molecular Weight [Da]
Molecular Weight Maximum [Da]
Commentary
Organism
47000
-
x * 47000, SDS-PAGE
Acidithiobacillus ferrooxidans
47290
-
x * 47290, deduced from amino acid sequence
Acidithiobacillus ferrooxidans
60000
65000
native enzyme, gel filtration
Acidithiobacillus ferrooxidans
Purification (Commentary) (protein specific)
Commentary
Organism
ammonium sulfate precipitation, phenyl-Toyopearl column chromatography, and TSKgel G3000 gel filtration
Acidithiobacillus ferrooxidans
Source Tissue (protein specific)
Source Tissue
Commentary
Organism
Textmining
culture condition:sulfur-grown cell
-
Acidithiobacillus ferrooxidans
-
Specific Activity [micromol/min/mg] (protein specific)
Specific Activity Minimum [Ámol/min/mg]
Specific Activity Maximum [Ámol/min/mg]
Commentary
Organism
0.11
-
cell-free extract, at pH 7.0, temperature not specified in the publication
Acidithiobacillus ferrooxidans
20.55
-
after 186.8fold purification, at pH 7.0, temperature not specified in the publication
Acidithiobacillus ferrooxidans
Substrates and Products (Substrate) (protein specific)
Substrates
Commentary Substrates
Literature (Substrates)
Organism
Products
Commentary (Products)
Literature (Products)
Organism (Products)
Reversibility
sulfide + ubiquinone-2
-
714519
Acidithiobacillus ferrooxidans
sulfur + ubiquinol-2
-
-
-
?
sulfide + ubiquinone-2
-
714519
Acidithiobacillus ferrooxidans NASF-1
sulfur + ubiquinol-2
-
-
-
?
Subunits (protein specific)
Subunits
Commentary
Organism
?
x * 47000, SDS-PAGE; x * 47290, deduced from amino acid sequence
Acidithiobacillus ferrooxidans
pH Optimum (protein specific)
pH Optimum Minimum
pH Optimum Maximum
Commentary
Organism
7
-
-
Acidithiobacillus ferrooxidans
pI Value (protein specific)
Organism
Commentary
pI Value Maximum
pI Value
Acidithiobacillus ferrooxidans
deduced from amino acid sequence
-
6.5
General Information
General Information
Commentary
Organism
metabolism
SQR is involved in elemental sulfur oxidation in sulfur-grown cells
Acidithiobacillus ferrooxidans
General Information (protein specific)
General Information
Commentary
Organism
metabolism
SQR is involved in elemental sulfur oxidation in sulfur-grown cells
Acidithiobacillus ferrooxidans
Other publictions for EC 1.8.5.4
No.
1st author
Pub Med
title
organims
journal
volume
pages
year
Activating Compound
Application
Cloned(Commentary)
Crystallization (Commentary)
Engineering
General Stability
Inhibitors
KM Value [mM]
Localization
Metals/Ions
Molecular Weight [Da]
Natural Substrates/ Products (Substrates)
Organic Solvent Stability
Organism
Oxidation Stability
Posttranslational Modification
Purification (Commentary)
Reaction
Renatured (Commentary)
Source Tissue
Specific Activity [micromol/min/mg]
Storage Stability
Substrates and Products (Substrate)
Subunits
Temperature Optimum [░C]
Temperature Range [░C]
Temperature Stability [░C]
Turnover Number [1/s]
pH Optimum
pH Range
pH Stability
Cofactor
Ki Value [mM]
pI Value
IC50 Value
Activating Compound (protein specific)
Application (protein specific)
Cloned(Commentary) (protein specific)
Cofactor (protein specific)
Crystallization (Commentary) (protein specific)
Engineering (protein specific)
General Stability (protein specific)
IC50 Value (protein specific)
Inhibitors (protein specific)
Ki Value [mM] (protein specific)
KM Value [mM] (protein specific)
Localization (protein specific)
Metals/Ions (protein specific)
Molecular Weight [Da] (protein specific)
Natural Substrates/ Products (Substrates) (protein specific)
Organic Solvent Stability (protein specific)
Oxidation Stability (protein specific)
Posttranslational Modification (protein specific)
Purification (Commentary) (protein specific)
Renatured (Commentary) (protein specific)
Source Tissue (protein specific)
Specific Activity [micromol/min/mg] (protein specific)
Storage Stability (protein specific)
Substrates and Products (Substrate) (protein specific)
Subunits (protein specific)
Temperature Optimum [░C] (protein specific)
Temperature Range [░C] (protein specific)
Temperature Stability [░C] (protein specific)
Turnover Number [1/s] (protein specific)
pH Optimum (protein specific)
pH Range (protein specific)
pH Stability (protein specific)
pI Value (protein specific)
Expression
General Information
General Information (protein specific)
Expression (protein specific)
KCat/KM [mM/s]
KCat/KM [mM/s] (protein specific)
742905
Landry
H2S oxidation by nanodisc-emb ...
Homo sapiens
J. Biol. Chem.
292
11641-11649
2017
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2
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1
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2
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2
2
742387
Xin
Recombinant Escherichia coli ...
Cupriavidus pinatubonensis
Environ. Microbiol.
18
5123-5136
2016
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1
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1
-
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4
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1
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1
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1
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742540
Shuman
A sulfidequinone oxidoreducta ...
Chlorobaculum tepidum
FEMS Microbiol. Lett.
363
1-8
2016
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1
-
-
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1
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1
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3
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1
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1
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1
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742790
Han
Sulfide consumption in Sulfur ...
Sulfurimonas denitrificans, Sulfurimonas denitrificans DSM-1251
J. Bacteriol.
198
1260-1267
2016
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1
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6
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2
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742453
Harb
Insertion and self-diffusion ...
Aquifex aeolicus
Eur. Phys. J. E Soft Matter
38
110
2015
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1
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742883
Mishanina
Transient kinetic analysis of ...
Homo sapiens
J. Biol. Chem.
290
25072-25080
2015
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743229
Jackson
Role of human sulfide quinone ...
Homo sapiens
Methods Enzymol.
554
255-270
2015
2
-
1
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-
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-
7
1
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1
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3
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1
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2
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4
1
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8
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1
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2
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1
1
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7
1
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1
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1
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2
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4
1
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8
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7
7
738630
Libiad
Organization of the human mito ...
Homo sapiens
J. Biol. Chem.
289
30901-30910
2014
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1
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4
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4
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1
1
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4
4
741767
Zhang
Characterization of the kinet ...
Acidithiobacillus ferrooxidans
Arch. Biochem. Biophys.
564
110-119
2014
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1
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8
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8
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7
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8
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8
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1
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1
1
1
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1
7
1
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8
8
742246
Ackermann
The vertebrate homologue of s ...
Mus musculus, Rattus norvegicus
Cell Tissue Res.
358
779-792
2014
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2
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1
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4
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24
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24
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2
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727080
Lencina
Characterization of the type I ...
Caldivirga maquilingensis, Caldivirga maquilingensis IC-167
Biochim. Biophys. Acta
1827
266-275
2013
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1
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7
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2
7
2
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12
1
1
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2
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12
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8
1
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1
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742250
Bauzai
On the importance of anion-pi ...
Acidithiobacillus ferrooxidans
Chem. Asian J.
8
2708-2713
2013
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1
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724350
Jackson
Human sulfide:Quinone oxidored ...
Homo sapiens
Biochemistry
51
6804-6815
2012
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7
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7
7
724681
Linden
Sulphide quinone reductase con ...
Mus musculus
Br. J. Pharmacol.
165
2178-2190
2012
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1
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725835
Cherney
Structure-activity characteriz ...
Acidithiobacillus ferrooxidans, Acidithiobacillus ferrooxidans DSM 14882
J. Struct. Biol.
178
319-328
2012
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1
1
7
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5
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725857
Ma
Response of sulfide: quinone o ...
Urechis unicinctus
Mar. Biotechnol.
14
245-251
2012
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726049
Ackermann
The vertebrate homolog of sulf ...
Rattus norvegicus
Neuroscience
199
1-12
2011
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Preliminary X-ray crystallogra ...
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2009
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716746
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The structure of Aquifex aeoli ...
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2009
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714950
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Sulfide:quinone oxidoreductase ...
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716170
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714148
Griesbeck
Mechanism of sulfide-quinone r ...
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713985
Nuebel
Sulfide:quinone oxidoreductase ...
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2000
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715343
Bronstein
Cyanobacterial sulfide-quinone ...
Aphanothece halophytica, Pseudanabaena limnetica
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2000
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Schuetz
Sulfide-quinone reductase from ...
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1999
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Sulfide oxidation in the photo ...
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714994
Shahak
Sulfide quinone reductase (SQR ...
Chlorobaculum thiosulfatiphilum
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