BRENDA - Enzyme Database show
show all sequences of 1.8.2.1

Bacterial sulfite dehydrogenases in organotrophic metabolism: separation and identification in Cupriavidus necator H16 and in Delftia acidovorans SPH-1

Denger, K.; Weinitschke, S.; Smits, T.H.; Schleheck, D.; Cook, A.M.; Microbiology 154, 256-263 (2008)

Data extracted from this reference:

Application
Application
Commentary
Organism
additional information
N-terminal amino acid sequence of the mature SorA from Cupriavidus necator H16 is currently unique
Cupriavidus necator H16
additional information
the N-terminal amino acid sequence of the mature SorA from Delftia acidovorans SPH-1 is found in about 500 proteins
Delftia acidovorans SPH-1
Localization
Localization
Commentary
Organism
GeneOntology No.
Textmining
periplasm
SorA
Cupriavidus necator H16
-
-
Molecular Weight [Da]
Molecular Weight [Da]
Molecular Weight Maximum [Da]
Commentary
Organism
39800
-
sequence analysis
Delftia acidovorans SPH-1
40000
-
denatured protein, sequence analysis
Cupriavidus necator H16
40000
-
2 * 40000, SDS-PAGE
Delftia acidovorans SPH-1
40700
-
sequence analysis
Cupriavidus necator H16
67000
-
gel filtration, SorA
Delftia acidovorans SPH-1
Organism
Organism
Primary Accession No. (UniProt)
Commentary
Textmining
Cupriavidus necator H16
-
-
-
Delftia acidovorans SPH-1
-
-
-
Purification (Commentary)
Commentary
Organism
by anion-exchange chromatography and gel filtration, 270fold
Delftia acidovorans SPH-1
by anion-exchange chromatography and gel filtration, 320fold
Cupriavidus necator H16
Storage Stability
Storage Stability
Organism
-20C, MES, phosphate, Tris or CAPS buffer, pH 5.5-10.5, for at least 3 months
Cupriavidus necator H16
Substrates and Products (Substrate)
Substrates
Commentary Substrates
Literature (Substrates)
Organism
Products
Commentary (Products)
Literature (Products)
Organism (Products)
Reversibility
sulfite + ferricyanide + H2O
-
694036
Cupriavidus necator H16
sulfate + ferrocyanide + H+
-
-
-
?
sulfite + ferricyanide + H2O
-
694036
Delftia acidovorans SPH-1
sulfate + ferrocyanide + H+
-
-
-
?
Subunits
Subunits
Commentary
Organism
homodimer
2 * 40000, SDS-PAGE
Delftia acidovorans SPH-1
monomer
-
Cupriavidus necator H16
pI Value
Organism
Commentary
pI Value Maximum
pI Value
Delftia acidovorans SPH-1
-
-
8.7
Application (protein specific)
Application
Commentary
Organism
additional information
N-terminal amino acid sequence of the mature SorA from Cupriavidus necator H16 is currently unique
Cupriavidus necator H16
additional information
the N-terminal amino acid sequence of the mature SorA from Delftia acidovorans SPH-1 is found in about 500 proteins
Delftia acidovorans SPH-1
Localization (protein specific)
Localization
Commentary
Organism
GeneOntology No.
Textmining
periplasm
SorA
Cupriavidus necator H16
-
-
Molecular Weight [Da] (protein specific)
Molecular Weight [Da]
Molecular Weight Maximum [Da]
Commentary
Organism
39800
-
sequence analysis
Delftia acidovorans SPH-1
40000
-
denatured protein, sequence analysis
Cupriavidus necator H16
40000
-
2 * 40000, SDS-PAGE
Delftia acidovorans SPH-1
40700
-
sequence analysis
Cupriavidus necator H16
67000
-
gel filtration, SorA
Delftia acidovorans SPH-1
Purification (Commentary) (protein specific)
Commentary
Organism
by anion-exchange chromatography and gel filtration, 270fold
Delftia acidovorans SPH-1
by anion-exchange chromatography and gel filtration, 320fold
Cupriavidus necator H16
Storage Stability (protein specific)
Storage Stability
Organism
-20C, MES, phosphate, Tris or CAPS buffer, pH 5.5-10.5, for at least 3 months
Cupriavidus necator H16
Substrates and Products (Substrate) (protein specific)
Substrates
Commentary Substrates
Literature (Substrates)
Organism
Products
Commentary (Products)
Literature (Products)
Organism (Products)
Reversibility
sulfite + ferricyanide + H2O
-
694036
Cupriavidus necator H16
sulfate + ferrocyanide + H+
-
-
-
?
sulfite + ferricyanide + H2O
-
694036
Delftia acidovorans SPH-1
sulfate + ferrocyanide + H+
-
-
-
?
Subunits (protein specific)
Subunits
Commentary
Organism
homodimer
2 * 40000, SDS-PAGE
Delftia acidovorans SPH-1
monomer
-
Cupriavidus necator H16
pI Value (protein specific)
Organism
Commentary
pI Value Maximum
pI Value
Delftia acidovorans SPH-1
-
-
8.7
Other publictions for EC 1.8.2.1
No.
1st author
Pub Med
title
organims
journal
volume
pages
year
Activating Compound
Application
Cloned(Commentary)
Crystallization (Commentary)
Engineering
General Stability
Inhibitors
KM Value [mM]
Localization
Metals/Ions
Molecular Weight [Da]
Natural Substrates/ Products (Substrates)
Organic Solvent Stability
Organism
Oxidation Stability
Posttranslational Modification
Purification (Commentary)
Reaction
Renatured (Commentary)
Source Tissue
Specific Activity [micromol/min/mg]
Storage Stability
Substrates and Products (Substrate)
Subunits
Temperature Optimum [C]
Temperature Range [C]
Temperature Stability [C]
Turnover Number [1/s]
pH Optimum
pH Range
pH Stability
Cofactor
Ki Value [mM]
pI Value
IC50 Value
Activating Compound (protein specific)
Application (protein specific)
Cloned(Commentary) (protein specific)
Cofactor (protein specific)
Crystallization (Commentary) (protein specific)
Engineering (protein specific)
General Stability (protein specific)
IC50 Value (protein specific)
Inhibitors (protein specific)
Ki Value [mM] (protein specific)
KM Value [mM] (protein specific)
Localization (protein specific)
Metals/Ions (protein specific)
Molecular Weight [Da] (protein specific)
Natural Substrates/ Products (Substrates) (protein specific)
Organic Solvent Stability (protein specific)
Oxidation Stability (protein specific)
Posttranslational Modification (protein specific)
Purification (Commentary) (protein specific)
Renatured (Commentary) (protein specific)
Source Tissue (protein specific)
Specific Activity [micromol/min/mg] (protein specific)
Storage Stability (protein specific)
Substrates and Products (Substrate) (protein specific)
Subunits (protein specific)
Temperature Optimum [C] (protein specific)
Temperature Range [C] (protein specific)
Temperature Stability [C] (protein specific)
Turnover Number [1/s] (protein specific)
pH Optimum (protein specific)
pH Range (protein specific)
pH Stability (protein specific)
pI Value (protein specific)
Expression
General Information
General Information (protein specific)
Expression (protein specific)
KCat/KM [mM/s]
KCat/KM [mM/s] (protein specific)
743146
Kalimuthu
Catalytic voltammetry of the ...
Sinorhizobium meliloti
J. Phys. Chem. B
118
7091-7099
2014
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1
2
1
1
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4
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1
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3
-
3
1
1
-
1
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2
1
1
-
-
-
-
-
-
-
724418
Rapson
Short circuiting a sulfite oxi ...
Starkeya novella
Biochim. Biophys. Acta
1807
108-118
2011
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1
-
4
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710857
Kalimuthu
Highly sensitive and stable el ...
Starkeya novella
Anal. Chem.
82
7374-7379
2010
-
1
1
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3
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2
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1
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1
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-
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-
711223
Johnson-Winters
Effects of interdomain tether ...
Homo sapiens
Biochemistry
49
1290-1296
2010
-
-
-
-
3
-
-
7
1
1
-
1
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1
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1
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1
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7
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1
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1
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3
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7
1
1
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1
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1
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-
1
-
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-
-
7
-
-
-
-
-
-
-
-
6
6
711242
Qiu
The structures of the C185S an ...
Gallus gallus
Biochemistry
49
3989-4000
2010
-
-
1
1
2
-
-
-
-
-
-
1
-
1
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1
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1
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2
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2
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1
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1
2
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1
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1
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1
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2
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-
-
711780
Spricigo
-
Sulfite biosensor based on osm ...
Homo sapiens
Colloids Surf. A Physicochem. Eng. Asp.
354
314-319
2010
-
1
1
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-
-
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1
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1
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1
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724587
Ogawa
Biochemical studies of a soxF- ...
Chlorobaculum tepidum
Biosci. Biotechnol. Biochem.
74
771-780
2010
-
-
-
-
-
-
-
1
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3
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1
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1
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1
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1
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-
1
1
-
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-
1
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-
1
1
-
-
-
700633
Astashkin
Exchangeable oxygens in the vi ...
Starkeya novella
Phys. Chem. Chem. Phys.
11
6733-6742
2009
-
-
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-
1
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1
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712157
Hernandez-Marin
Theoretical study of the oxida ...
Gallus gallus
Inorg. Chem.
48
1323-1333
2009
-
-
-
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1
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1
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1
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1
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-
1
-
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-
722663
Bailey
Molecular basis for enzymatic ...
Starkeya novella
J. Biol. Chem.
284
2053-2063
2009
-
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-
1
3
-
-
32
-
1
-
1
-
1
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2
-
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-
-
30
1
1
-
2
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2
1
3
-
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-
-
32
-
1
-
1
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-
2
-
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-
30
1
1
-
-
-
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-
-
32
32
691057
Rapson
Direct catalytic electrochemis ...
Starkeya novella
Biochim. Biophys. Acta
1777
1319-1325
2008
1
-
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-
4
6
-
1
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2
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1
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1
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1
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4
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6
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1
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1
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694023
Workun
Evolutionary persistence of th ...
Starkeya novella
Microbiol. Mol. Biol. Rev.
72
228-48
2008
-
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1
1
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7
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1
1
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1
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694036
Denger
Bacterial sulfite dehydrogenas ...
Cupriavidus necator H16, Delftia acidovorans SPH-1
Microbiology
154
256-263
2008
-
2
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1
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5
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7
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2
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1
2
2
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1
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1
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5
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2
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1
2
2
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1
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667714
Wilson
The G473D mutation impairs dim ...
Homo sapiens
Biochemistry
45
2149-2160
2006
-
-
1
-
4
-
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8
-
1
5
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1
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1
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1
2
1
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4
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8
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1
5
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1
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1
2
1
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1
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667744
Kappler
Kinetic and structural evidenc ...
Starkeya novella
Biochemistry
45
9696-9705
2006
-
-
1
1
1
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-
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1
2
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-
2
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1
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1
1
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6
-
2
-
1
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1
1
1
1
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2
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1
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1
1
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6
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2
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668939
Doonan
Structure of the active site o ...
Starkeya novella
Inorg. Chem.
45
7488-7492
2006
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695918
Gorzynska
Inducible transcription of gen ...
Ruegeria pomeroyi
Arch. Microbiol.
185
402-406
2006
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667688
Sibille
Solution structure of the sulf ...
Escherichia coli
Biochemistry
44
9086-9095
2005
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668937
Raitsimring
Pulsed EPR studies of a bacter ...
Starkeya novella
Inorg. Chem.
44
7283-7285
2005
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1
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4
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1
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-
669353
Kappler
Molecular basis of intramolecu ...
Starkeya novella
J. Biol. Chem.
280
24999-25007
2005
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1
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6
-
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1
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1
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2
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2
1
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1
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1
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657461
Kappler
Crystallization and preliminar ...
Starkeya novella
Acta Crystallogr. Sect. D
60
2070-2072
2004
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1
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2
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1
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658228
Frederiksen
Sulfite-oxido-reductase is inv ...
Desulfocapsa sulfexigens
Biodegradation
14
189-198
2003
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1
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2
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1
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Rhodotorula sp.
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Partial purification and resol ...
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Purification of Thiobacillus n ...
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The sulfite oxidase of Thiobac ...
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Enzymes involved in the metabo ...
Thiobacillus thioparus
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394077
Charles
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Purification and properties of ...
Starkeya novella
Biochim. Biophys. Acta
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Charles
Mechanism of thiosulfate oxida ...
Starkeya novella, Thiobacillus denitrificans
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1966
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