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show all sequences of 1.3.7.8

Genetic diversity of benzoyl coenzyme a reductase genes detected in denitrifying isolates and estuarine sediment communities

Song, B.; Ward, B.B.; Appl. Environ. Microbiol. 71, 2036-2045 (2005)

Data extracted from this reference:

Application
Application
Commentary
Organism
analysis
the detection of benzoyl-CoA reductase genes from bacterial pure cultures and environmental samples can be used to determine the genetic capability for anaerobic degradation of aromatic compounds and to monitor the anaerobic degradation of many different aromatic compounds in the environment. Sequence divergence of benzoyl-CoA reductase genes could be used to identify and distinguish among different bacterial populations degrading aromatic compounds in various environments. Microarray or real-time PCR amplification with specific primers for different types of benzoyl-CoA reductase genes could be applicable in environmental studies to determine which types are dominant and activated in particular environmental conditions and to evaluate the population response to variation in environmental factors. The first step in this approach is described
Acidovorax sp.
analysis
the detection of benzoyl-CoA reductase genes from bacterial pure cultures and environmental samples can be used to determine the genetic capability for anaerobic degradation of aromatic compounds and to monitor the anaerobic degradation of many different aromatic compounds in the environment. Sequence divergence of benzoyl-CoA reductase genes could be used to identify and distinguish among different bacterial populations degrading aromatic compounds in various environments. Microarray or real-time PCR amplification with specific primers for different types of benzoyl-CoA reductase genes could be applicable in environmental studies to determine which types are dominant and activated in particular environmental conditions and to evaluate the population response to variation in environmental factors. The first step in this approach is described; the detection of benzoyl-CoA reductase genes from bacterial pure cultures and environmental samples can be used to determine the genetic capability for anaerobic degradation of aromatic compounds and to monitor the anaerobic degradation of many different aromatic compounds in the environment. Sequence divergence of benzoyl-CoA reductase genes could be used to identify and distinguish among different bacterial populations degrading aromatic compounds in various environments. Microarray or real-time PCR amplification with specific primers for different types of benzoyl-CoA reductase genes could be applicable in environmental studies to determine which types are dominant and activated in particular environmental conditions and to evaluate the population response to variation in environmental factors. The first step in this approach is described; the detection of benzoyl-CoA reductase genes from bacterial pure cultures and environmental samples can be used to determine the genetic capability for anaerobic degradation of aromatic compounds and to monitor the anaerobic degradation of many different aromatic compounds in the environment. Sequence divergence of benzoyl-CoA reductase genes could be used to identify and distinguish among different bacterial populations degrading aromatic compounds in various environments. Microarray or real-time PCR amplification with specific primers for different types of benzoyl-CoA reductase genes could be applicable in environmental studies to determine which types are dominant and activated in particular environmental conditions and to evaluate the population response to variation in environmental factors. The first step in this approach is described; the detection of benzoyl-CoA reductase genes from bacterial pure cultures and environmental samples can be used to determine the genetic capability for anaerobic degradation of aromatic compounds and to monitor the anaerobic degradation of many different aromatic compounds in the environment. Sequence divergence of benzoyl-CoA reductase genes could be used to identify and distinguish among different bacterial populations degrading aromatic compounds in various environments. Microarray or real-time PCR amplification with specific primers for different types of benzoyl-CoA reductase genes could be applicable in environmental studies to determine which types are dominant and activated in particular environmental conditions and to evaluate the population response to variation in environmental factors. The first step in this approach is described; the detection of benzoyl-CoA reductase genes from bacterial pure cultures and environmental samples can be used to determine the genetic capability for anaerobic degradation of aromatic compounds and to monitor the anaerobic degradation of many different aromatic compounds in the environment. Sequence divergence of benzoyl-CoA reductase genes could be used to identify and distinguish among different bacterial populations degrading aromatic compounds in various environments. Microarray or real-time PCR amplification with specific primers for different types of benzoyl-CoA reductase genes could be applicable in environmental studies to determine which types are dominant and activated in particular environmental conditions and to evaluate the population response to variation in environmental factors. The first step in this approach is described
Azoarcus evansii
analysis
the detection of benzoyl-CoA reductase genes from bacterial pure cultures and environmental samples can be used to determine the genetic capability for anaerobic degradation of aromatic compounds and to monitor the anaerobic degradation of many different aromatic compounds in the environment. Sequence divergence of benzoyl-CoA reductase genes could be used to identify and distinguish among different bacterial populations degrading aromatic compounds in various environments. Microarray or real-time PCR amplification with specific primers for different types of benzoyl-CoA reductase genes could be applicable in environmental studies to determine which types are dominant and activated in particular environmental conditions and to evaluate the population response to variation in environmental factors. The first step in this approach is described
Azoarcus toluclasticus
analysis
the detection of benzoyl-CoA reductase genes from bacterial pure cultures and environmental samples can be used to determine the genetic capability for anaerobic degradation of aromatic compounds and to monitor the anaerobic degradation of many different aromatic compounds in the environment. Sequence divergence of benzoyl-CoA reductase genes could be used to identify and distinguish among different bacterial populations degrading aromatic compounds in various environments. Microarray or real-time PCR amplification with specific primers for different types of benzoyl-CoA reductase genes could be applicable in environmental studies to determine which types are dominant and activated in particular environmental conditions and to evaluate the population response to variation in environmental factors. The first step in this approach is described
Azoarcus tolulyticus
analysis
the detection of benzoyl-CoA reductase genes from bacterial pure cultures and environmental samples can be used to determine the genetic capability for anaerobic degradation of aromatic compounds and to monitor the anaerobic degradation of many different aromatic compounds in the environment. Sequence divergence of benzoyl-CoA reductase genes could be used to identify and distinguish among different bacterial populations degrading aromatic compounds in various environments. Microarray or real-time PCR amplification with specific primers for different types of benzoyl-CoA reductase genes could be applicable in environmental studies to determine which types are dominant and activated in particular environmental conditions and to evaluate the population response to variation in environmental factors. The first step in this approach is described
Azoarcus toluvorans
analysis
the detection of benzoyl-CoA reductase genes from bacterial pure cultures and environmental samples can be used to determine the genetic capability for anaerobic degradation of aromatic compounds and to monitor the anaerobic degradation of many different aromatic compounds in the environment. Sequence divergence of benzoyl-CoA reductase genes could be used to identify and distinguish among different bacterial populations degrading aromatic compounds in various environments. Microarray or real-time PCR amplification with specific primers for different types of benzoyl-CoA reductase genes could be applicable in environmental studies to determine which types are dominant and activated in particular environmental conditions and to evaluate the population response to variation in environmental factors. The first step in this approach is described
Magnetospirillum magnetotacticum
analysis
the detection of benzoyl-CoA reductase genes from bacterial pure cultures and environmental samples can be used to determine the genetic capability for anaerobic degradation of aromatic compounds and to monitor the anaerobic degradation of many different aromatic compounds in the environment. Sequence divergence of benzoyl-CoA reductase genes could be used to identify and distinguish among different bacterial populations degrading aromatic compounds in various environments. Microarray or real-time PCR amplification with specific primers for different types of benzoyl-CoA reductase genes could be applicable in environmental studies to determine which types are dominant and activated in particular environmental conditions and to evaluate the population response to variation in environmental factors. The first step in this approach is described; the detection of benzoyl-CoA reductase genes from bacterial pure cultures and environmental samples can be used to determine the genetic capability for anaerobic degradation of aromatic compounds and to monitor the anaerobic degradation of many different aromatic compounds in the environment. Sequence divergence of benzoyl-CoA reductase genes could be used to identify and distinguish among different bacterial populations degrading aromatic compounds in various environments. Microarray or real-time PCR amplification with specific primers for different types of benzoyl-CoA reductase genes could be applicable in environmental studies to determine which types are dominant and activated in particular environmental conditions and to evaluate the population response to variation in environmental factors. The first step in this approach is described; the detection of benzoyl-CoA reductase genes from bacterial pure cultures and environmental samples can be used to determine the genetic capability for anaerobic degradation of aromatic compounds and to monitor the anaerobic degradation of many different aromatic compounds in the environment. Sequence divergence of benzoyl-CoA reductase genes could be used to identify and distinguish among different bacterial populations degrading aromatic compounds in various environments. Microarray or real-time PCR amplification with specific primers for different types of benzoyl-CoA reductase genes could be applicable in environmental studies to determine which types are dominant and activated in particular environmental conditions and to evaluate the population response to variation in environmental factors. The first step in this approach is described; the detection of benzoyl-CoA reductase genes from bacterial pure cultures and environmental samples can be used to determine the genetic capability for anaerobic degradation of aromatic compounds and to monitor the anaerobic degradation of many different aromatic compounds in the environment. Sequence divergence of benzoyl-CoA reductase genes could be used to identify and distinguish among different bacterial populations degrading aromatic compounds in various environments. Microarray or real-time PCR amplification with specific primers for different types of benzoyl-CoA reductase genes could be applicable in environmental studies to determine which types are dominant and activated in particular environmental conditions and to evaluate the population response to variation in environmental factors. The first step in this approach is described
Rhodopseudomonas palustris
analysis
the detection of benzoyl-CoA reductase genes from bacterial pure cultures and environmental samples can be used to determine the genetic capability for anaerobic degradation of aromatic compounds and to monitor the anaerobic degradation of many different aromatic compounds in the environment. Sequence divergence of benzoyl-CoA reductase genes could be used to identify and distinguish among different bacterial populations degrading aromatic compounds in various environments. Microarray or real-time PCR amplification with specific primers for different types of benzoyl-CoA reductase genes could be applicable in environmental studies to determine which types are dominant and activated in particular environmental conditions and to evaluate the population response to variation in environmental factors. The first step in this approach is described
Thauera aromatica
analysis
the detection of benzoyl-CoA reductase genes from bacterial pure cultures and environmental samples can be used to determine the genetic capability for anaerobic degradation of aromatic compounds and to monitor the anaerobic degradation of many different aromatic compounds in the environment. Sequence divergence of benzoyl-CoA reductase genes could be used to identify and distinguish among different bacterial populations degrading aromatic compounds in various environments. Microarray or real-time PCR amplification with specific primers for different types of benzoyl-CoA reductase genes could be applicable in environmental studies to determine which types are dominant and activated in particular environmental conditions and to evaluate the population response to variation in environmental factors. The first step in this approach is described
Thauera chlorobenzoica
analysis
the detection of benzoyl-CoA reductase genes from bacterial pure cultures and environmental samples can be used to determine the genetic capability for anaerobic degradation of aromatic compounds and to monitor the anaerobic degradation of many different aromatic compounds in the environment. Sequence divergence of benzoyl-CoA reductase genes could be used to identify and distinguish among different bacterial populations degrading aromatic compounds in various environments. Microarray or real-time PCR amplification with specific primers for different types of benzoyl-CoA reductase genes could be applicable in environmental studies to determine which types are dominant and activated in particular environmental conditions and to evaluate the population response to variation in environmental factors. The first step in this approach is described
Thauera selenatis
Natural Substrates/ Products (Substrates)
Natural Substrates
Organism
Commentary (Nat. Sub.)
Natural Products
Commentary (Nat. Pro.)
Organism (Nat. Pro.)
Reversibility
benzoyl-CoA + reduced acceptor + ATP + H2O
Acidovorax sp.
central enzyme in the anaerobic degradation of organic carbon
cyclohexa-1,5-diene-1-carbonyl-CoA + acceptor + ADP + phosphate
-
-
?
benzoyl-CoA + reduced acceptor + ATP + H2O
Magnetospirillum magnetotacticum
central enzyme in the anaerobic degradation of organic carbon
cyclohexa-1,5-diene-1-carbonyl-CoA + acceptor + ADP + phosphate
-
-
?
benzoyl-CoA + reduced acceptor + ATP + H2O
Thauera selenatis
central enzyme in the anaerobic degradation of organic carbon
cyclohexa-1,5-diene-1-carbonyl-CoA + acceptor + ADP + phosphate
-
-
?
benzoyl-CoA + reduced acceptor + ATP + H2O
Thauera aromatica
central enzyme in the anaerobic degradation of organic carbon
cyclohexa-1,5-diene-1-carbonyl-CoA + acceptor + ADP + phosphate
-
-
?
benzoyl-CoA + reduced acceptor + ATP + H2O
Azoarcus evansii
central enzyme in the anaerobic degradation of organic carbon
cyclohexa-1,5-diene-1-carbonyl-CoA + acceptor + ADP + phosphate
-
-
?
benzoyl-CoA + reduced acceptor + ATP + H2O
Azoarcus tolulyticus
central enzyme in the anaerobic degradation of organic carbon
cyclohexa-1,5-diene-1-carbonyl-CoA + acceptor + ADP + phosphate
-
-
?
benzoyl-CoA + reduced acceptor + ATP + H2O
Thauera chlorobenzoica
central enzyme in the anaerobic degradation of organic carbon
cyclohexa-1,5-diene-1-carbonyl-CoA + acceptor + ADP + phosphate
-
-
?
benzoyl-CoA + reduced acceptor + ATP + H2O
Azoarcus toluvorans
central enzyme in the anaerobic degradation of organic carbon
cyclohexa-1,5-diene-1-carbonyl-CoA + acceptor + ADP + phosphate
-
-
?
benzoyl-CoA + reduced acceptor + ATP + H2O
Azoarcus toluclasticus
central enzyme in the anaerobic degradation of organic carbon
cyclohexa-1,5-diene-1-carbonyl-CoA + acceptor + ADP + phosphate
-
-
?
benzoyl-CoA + reduced acceptor + ATP + H2O
Rhodopseudomonas palustris
central enzyme in the anaerobic degradation of organic carbon
cyclohexa-1,5-diene-1-carbonyl-CoA + acceptor + ADP + phosphate
-
-
?
benzoyl-CoA + reduced acceptor + ATP + H2O
Thauera selenatis 3CB-1
central enzyme in the anaerobic degradation of organic carbon
cyclohexa-1,5-diene-1-carbonyl-CoA + acceptor + ADP + phosphate
-
-
?
benzoyl-CoA + reduced acceptor + ATP + H2O
Acidovorax sp. 2FB7
central enzyme in the anaerobic degradation of organic carbon
cyclohexa-1,5-diene-1-carbonyl-CoA + acceptor + ADP + phosphate
-
-
?
benzoyl-CoA + reduced acceptor + ATP + H2O
Thauera chlorobenzoica 3CB-1
central enzyme in the anaerobic degradation of organic carbon
cyclohexa-1,5-diene-1-carbonyl-CoA + acceptor + ADP + phosphate
-
-
?
Organism
Organism
Primary Accession No. (UniProt)
Commentary
Textmining
Acidovorax sp.
-
-
-
Acidovorax sp. 2FB7
-
-
-
Azoarcus evansii
Q8VUF1
subunit of benzoyl-CoA reductase, gene name: bzdA
-
Azoarcus evansii
Q8VUG0
subunit of benzoyl-CoA reductase, gene name: bzdQ
-
Azoarcus evansii
Q8VUG1
subunit of benzoyl-CoA reductase, gene name: bzdP
-
Azoarcus evansii
Q8VUG2
subunit of benzoyl-CoA reductase, gene name: bzdO
-
Azoarcus evansii
Q8VUG3
subunit of benzoyl-CoA reductase, gene name: bzdN
-
Azoarcus toluclasticus
-
-
-
Azoarcus tolulyticus
Q4Z8X5
putative benzoyl-CoA reductase, gene name: bzdQ
-
Azoarcus toluvorans
-
-
-
Magnetospirillum magnetotacticum
-
-
-
Rhodopseudomonas palustris
O07460
subunit of benzoyl-CoA reductase, gene name badD
-
Rhodopseudomonas palustris
O07461
subunit of benzoyl-CoA reductase, gene name badE
-
Rhodopseudomonas palustris
O07462
subunit of benzoyl-CoA reductase, gene name badF
-
Rhodopseudomonas palustris
O07463
subunit of benzoyl-CoA reductase, gene name badG
-
Thauera aromatica
O87876
A-subunit of benzoyl-CoA reductase; all the Thauera strains and the isolates from the genera Acidovorax, Bradyrhizobium, Paracoccus, Ensifer, and Pseudomonas have bcr-type benzoyl-CoA reductases with amino acid sequence similarities of more than 97%
-
Thauera chlorobenzoica
-
all the Thauera strains and the isolates from the genera Acidovorax, Bradyrhizobium, Paracoccus, Ensifer, and Pseudomonas have bcr-type benzoyl-CoA reductases with amino acid sequence similarities of more than 97%
-
Thauera chlorobenzoica 3CB-1
-
all the Thauera strains and the isolates from the genera Acidovorax, Bradyrhizobium, Paracoccus, Ensifer, and Pseudomonas have bcr-type benzoyl-CoA reductases with amino acid sequence similarities of more than 97%
-
Thauera selenatis
-
all the Thauera strains and the isolates from the genera Acidovorax, Bradyrhizobium, Paracoccus, Ensifer, and Pseudomonas have bcr-type benzoyl-CoA reductases with amino acid sequence similarities of more than 97%
-
Thauera selenatis 3CB-1
-
all the Thauera strains and the isolates from the genera Acidovorax, Bradyrhizobium, Paracoccus, Ensifer, and Pseudomonas have bcr-type benzoyl-CoA reductases with amino acid sequence similarities of more than 97%
-
Substrates and Products (Substrate)
Substrates
Commentary Substrates
Literature (Substrates)
Organism
Products
Commentary (Products)
Literature (Products)
Organism (Products)
Reversibility
benzoyl-CoA + reduced acceptor + ATP + H2O
central enzyme in the anaerobic degradation of organic carbon
671412
Acidovorax sp.
cyclohexa-1,5-diene-1-carbonyl-CoA + acceptor + ADP + phosphate
-
-
-
?
benzoyl-CoA + reduced acceptor + ATP + H2O
central enzyme in the anaerobic degradation of organic carbon
671412
Magnetospirillum magnetotacticum
cyclohexa-1,5-diene-1-carbonyl-CoA + acceptor + ADP + phosphate
-
-
-
?
benzoyl-CoA + reduced acceptor + ATP + H2O
central enzyme in the anaerobic degradation of organic carbon
671412
Thauera selenatis
cyclohexa-1,5-diene-1-carbonyl-CoA + acceptor + ADP + phosphate
-
-
-
?
benzoyl-CoA + reduced acceptor + ATP + H2O
central enzyme in the anaerobic degradation of organic carbon
671412
Thauera aromatica
cyclohexa-1,5-diene-1-carbonyl-CoA + acceptor + ADP + phosphate
-
-
-
?
benzoyl-CoA + reduced acceptor + ATP + H2O
central enzyme in the anaerobic degradation of organic carbon
671412
Azoarcus evansii
cyclohexa-1,5-diene-1-carbonyl-CoA + acceptor + ADP + phosphate
-
-
-
?
benzoyl-CoA + reduced acceptor + ATP + H2O
central enzyme in the anaerobic degradation of organic carbon
671412
Azoarcus tolulyticus
cyclohexa-1,5-diene-1-carbonyl-CoA + acceptor + ADP + phosphate
-
-
-
?
benzoyl-CoA + reduced acceptor + ATP + H2O
central enzyme in the anaerobic degradation of organic carbon
671412
Thauera chlorobenzoica
cyclohexa-1,5-diene-1-carbonyl-CoA + acceptor + ADP + phosphate
-
-
-
?
benzoyl-CoA + reduced acceptor + ATP + H2O
central enzyme in the anaerobic degradation of organic carbon
671412
Azoarcus toluvorans
cyclohexa-1,5-diene-1-carbonyl-CoA + acceptor + ADP + phosphate
-
-
-
?
benzoyl-CoA + reduced acceptor + ATP + H2O
central enzyme in the anaerobic degradation of organic carbon
671412
Azoarcus toluclasticus
cyclohexa-1,5-diene-1-carbonyl-CoA + acceptor + ADP + phosphate
-
-
-
?
benzoyl-CoA + reduced acceptor + ATP + H2O
central enzyme in the anaerobic degradation of organic carbon
671412
Rhodopseudomonas palustris
cyclohexa-1,5-diene-1-carbonyl-CoA + acceptor + ADP + phosphate
-
-
-
?
benzoyl-CoA + reduced acceptor + ATP + H2O
central enzyme in the anaerobic degradation of organic carbon
671412
Thauera selenatis 3CB-1
cyclohexa-1,5-diene-1-carbonyl-CoA + acceptor + ADP + phosphate
-
-
-
?
benzoyl-CoA + reduced acceptor + ATP + H2O
central enzyme in the anaerobic degradation of organic carbon
671412
Acidovorax sp. 2FB7
cyclohexa-1,5-diene-1-carbonyl-CoA + acceptor + ADP + phosphate
-
-
-
?
benzoyl-CoA + reduced acceptor + ATP + H2O
central enzyme in the anaerobic degradation of organic carbon
671412
Thauera chlorobenzoica 3CB-1
cyclohexa-1,5-diene-1-carbonyl-CoA + acceptor + ADP + phosphate
-
-
-
?
Application (protein specific)
Application
Commentary
Organism
analysis
the detection of benzoyl-CoA reductase genes from bacterial pure cultures and environmental samples can be used to determine the genetic capability for anaerobic degradation of aromatic compounds and to monitor the anaerobic degradation of many different aromatic compounds in the environment. Sequence divergence of benzoyl-CoA reductase genes could be used to identify and distinguish among different bacterial populations degrading aromatic compounds in various environments. Microarray or real-time PCR amplification with specific primers for different types of benzoyl-CoA reductase genes could be applicable in environmental studies to determine which types are dominant and activated in particular environmental conditions and to evaluate the population response to variation in environmental factors. The first step in this approach is described
Acidovorax sp.
analysis
the detection of benzoyl-CoA reductase genes from bacterial pure cultures and environmental samples can be used to determine the genetic capability for anaerobic degradation of aromatic compounds and to monitor the anaerobic degradation of many different aromatic compounds in the environment. Sequence divergence of benzoyl-CoA reductase genes could be used to identify and distinguish among different bacterial populations degrading aromatic compounds in various environments. Microarray or real-time PCR amplification with specific primers for different types of benzoyl-CoA reductase genes could be applicable in environmental studies to determine which types are dominant and activated in particular environmental conditions and to evaluate the population response to variation in environmental factors. The first step in this approach is described
Azoarcus evansii
analysis
the detection of benzoyl-CoA reductase genes from bacterial pure cultures and environmental samples can be used to determine the genetic capability for anaerobic degradation of aromatic compounds and to monitor the anaerobic degradation of many different aromatic compounds in the environment. Sequence divergence of benzoyl-CoA reductase genes could be used to identify and distinguish among different bacterial populations degrading aromatic compounds in various environments. Microarray or real-time PCR amplification with specific primers for different types of benzoyl-CoA reductase genes could be applicable in environmental studies to determine which types are dominant and activated in particular environmental conditions and to evaluate the population response to variation in environmental factors. The first step in this approach is described
Azoarcus toluclasticus
analysis
the detection of benzoyl-CoA reductase genes from bacterial pure cultures and environmental samples can be used to determine the genetic capability for anaerobic degradation of aromatic compounds and to monitor the anaerobic degradation of many different aromatic compounds in the environment. Sequence divergence of benzoyl-CoA reductase genes could be used to identify and distinguish among different bacterial populations degrading aromatic compounds in various environments. Microarray or real-time PCR amplification with specific primers for different types of benzoyl-CoA reductase genes could be applicable in environmental studies to determine which types are dominant and activated in particular environmental conditions and to evaluate the population response to variation in environmental factors. The first step in this approach is described
Azoarcus tolulyticus
analysis
the detection of benzoyl-CoA reductase genes from bacterial pure cultures and environmental samples can be used to determine the genetic capability for anaerobic degradation of aromatic compounds and to monitor the anaerobic degradation of many different aromatic compounds in the environment. Sequence divergence of benzoyl-CoA reductase genes could be used to identify and distinguish among different bacterial populations degrading aromatic compounds in various environments. Microarray or real-time PCR amplification with specific primers for different types of benzoyl-CoA reductase genes could be applicable in environmental studies to determine which types are dominant and activated in particular environmental conditions and to evaluate the population response to variation in environmental factors. The first step in this approach is described
Azoarcus toluvorans
analysis
the detection of benzoyl-CoA reductase genes from bacterial pure cultures and environmental samples can be used to determine the genetic capability for anaerobic degradation of aromatic compounds and to monitor the anaerobic degradation of many different aromatic compounds in the environment. Sequence divergence of benzoyl-CoA reductase genes could be used to identify and distinguish among different bacterial populations degrading aromatic compounds in various environments. Microarray or real-time PCR amplification with specific primers for different types of benzoyl-CoA reductase genes could be applicable in environmental studies to determine which types are dominant and activated in particular environmental conditions and to evaluate the population response to variation in environmental factors. The first step in this approach is described
Magnetospirillum magnetotacticum
analysis
the detection of benzoyl-CoA reductase genes from bacterial pure cultures and environmental samples can be used to determine the genetic capability for anaerobic degradation of aromatic compounds and to monitor the anaerobic degradation of many different aromatic compounds in the environment. Sequence divergence of benzoyl-CoA reductase genes could be used to identify and distinguish among different bacterial populations degrading aromatic compounds in various environments. Microarray or real-time PCR amplification with specific primers for different types of benzoyl-CoA reductase genes could be applicable in environmental studies to determine which types are dominant and activated in particular environmental conditions and to evaluate the population response to variation in environmental factors. The first step in this approach is described
Rhodopseudomonas palustris
analysis
the detection of benzoyl-CoA reductase genes from bacterial pure cultures and environmental samples can be used to determine the genetic capability for anaerobic degradation of aromatic compounds and to monitor the anaerobic degradation of many different aromatic compounds in the environment. Sequence divergence of benzoyl-CoA reductase genes could be used to identify and distinguish among different bacterial populations degrading aromatic compounds in various environments. Microarray or real-time PCR amplification with specific primers for different types of benzoyl-CoA reductase genes could be applicable in environmental studies to determine which types are dominant and activated in particular environmental conditions and to evaluate the population response to variation in environmental factors. The first step in this approach is described
Thauera aromatica
analysis
the detection of benzoyl-CoA reductase genes from bacterial pure cultures and environmental samples can be used to determine the genetic capability for anaerobic degradation of aromatic compounds and to monitor the anaerobic degradation of many different aromatic compounds in the environment. Sequence divergence of benzoyl-CoA reductase genes could be used to identify and distinguish among different bacterial populations degrading aromatic compounds in various environments. Microarray or real-time PCR amplification with specific primers for different types of benzoyl-CoA reductase genes could be applicable in environmental studies to determine which types are dominant and activated in particular environmental conditions and to evaluate the population response to variation in environmental factors. The first step in this approach is described
Thauera chlorobenzoica
analysis
the detection of benzoyl-CoA reductase genes from bacterial pure cultures and environmental samples can be used to determine the genetic capability for anaerobic degradation of aromatic compounds and to monitor the anaerobic degradation of many different aromatic compounds in the environment. Sequence divergence of benzoyl-CoA reductase genes could be used to identify and distinguish among different bacterial populations degrading aromatic compounds in various environments. Microarray or real-time PCR amplification with specific primers for different types of benzoyl-CoA reductase genes could be applicable in environmental studies to determine which types are dominant and activated in particular environmental conditions and to evaluate the population response to variation in environmental factors. The first step in this approach is described
Thauera selenatis
Natural Substrates/ Products (Substrates) (protein specific)
Natural Substrates
Organism
Commentary (Nat. Sub.)
Natural Products
Commentary (Nat. Pro.)
Organism (Nat. Pro.)
Reversibility
benzoyl-CoA + reduced acceptor + ATP + H2O
Acidovorax sp.
central enzyme in the anaerobic degradation of organic carbon
cyclohexa-1,5-diene-1-carbonyl-CoA + acceptor + ADP + phosphate
-
-
?
benzoyl-CoA + reduced acceptor + ATP + H2O
Magnetospirillum magnetotacticum
central enzyme in the anaerobic degradation of organic carbon
cyclohexa-1,5-diene-1-carbonyl-CoA + acceptor + ADP + phosphate
-
-
?
benzoyl-CoA + reduced acceptor + ATP + H2O
Thauera selenatis
central enzyme in the anaerobic degradation of organic carbon
cyclohexa-1,5-diene-1-carbonyl-CoA + acceptor + ADP + phosphate
-
-
?
benzoyl-CoA + reduced acceptor + ATP + H2O
Thauera aromatica
central enzyme in the anaerobic degradation of organic carbon
cyclohexa-1,5-diene-1-carbonyl-CoA + acceptor + ADP + phosphate
-
-
?
benzoyl-CoA + reduced acceptor + ATP + H2O
Azoarcus evansii
central enzyme in the anaerobic degradation of organic carbon
cyclohexa-1,5-diene-1-carbonyl-CoA + acceptor + ADP + phosphate
-
-
?
benzoyl-CoA + reduced acceptor + ATP + H2O
Azoarcus tolulyticus
central enzyme in the anaerobic degradation of organic carbon
cyclohexa-1,5-diene-1-carbonyl-CoA + acceptor + ADP + phosphate
-
-
?
benzoyl-CoA + reduced acceptor + ATP + H2O
Thauera chlorobenzoica
central enzyme in the anaerobic degradation of organic carbon
cyclohexa-1,5-diene-1-carbonyl-CoA + acceptor + ADP + phosphate
-
-
?
benzoyl-CoA + reduced acceptor + ATP + H2O
Azoarcus toluvorans
central enzyme in the anaerobic degradation of organic carbon
cyclohexa-1,5-diene-1-carbonyl-CoA + acceptor + ADP + phosphate
-
-
?
benzoyl-CoA + reduced acceptor + ATP + H2O
Azoarcus toluclasticus
central enzyme in the anaerobic degradation of organic carbon
cyclohexa-1,5-diene-1-carbonyl-CoA + acceptor + ADP + phosphate
-
-
?
benzoyl-CoA + reduced acceptor + ATP + H2O
Rhodopseudomonas palustris
central enzyme in the anaerobic degradation of organic carbon
cyclohexa-1,5-diene-1-carbonyl-CoA + acceptor + ADP + phosphate
-
-
?
benzoyl-CoA + reduced acceptor + ATP + H2O
Thauera selenatis 3CB-1
central enzyme in the anaerobic degradation of organic carbon
cyclohexa-1,5-diene-1-carbonyl-CoA + acceptor + ADP + phosphate
-
-
?
benzoyl-CoA + reduced acceptor + ATP + H2O
Acidovorax sp. 2FB7
central enzyme in the anaerobic degradation of organic carbon
cyclohexa-1,5-diene-1-carbonyl-CoA + acceptor + ADP + phosphate
-
-
?
benzoyl-CoA + reduced acceptor + ATP + H2O
Thauera chlorobenzoica 3CB-1
central enzyme in the anaerobic degradation of organic carbon
cyclohexa-1,5-diene-1-carbonyl-CoA + acceptor + ADP + phosphate
-
-
?
Substrates and Products (Substrate) (protein specific)
Substrates
Commentary Substrates
Literature (Substrates)
Organism
Products
Commentary (Products)
Literature (Products)
Organism (Products)
Reversibility
benzoyl-CoA + reduced acceptor + ATP + H2O
central enzyme in the anaerobic degradation of organic carbon
671412
Acidovorax sp.
cyclohexa-1,5-diene-1-carbonyl-CoA + acceptor + ADP + phosphate
-
-
-
?
benzoyl-CoA + reduced acceptor + ATP + H2O
central enzyme in the anaerobic degradation of organic carbon
671412
Magnetospirillum magnetotacticum
cyclohexa-1,5-diene-1-carbonyl-CoA + acceptor + ADP + phosphate
-
-
-
?
benzoyl-CoA + reduced acceptor + ATP + H2O
central enzyme in the anaerobic degradation of organic carbon
671412
Thauera selenatis
cyclohexa-1,5-diene-1-carbonyl-CoA + acceptor + ADP + phosphate
-
-
-
?
benzoyl-CoA + reduced acceptor + ATP + H2O
central enzyme in the anaerobic degradation of organic carbon
671412
Thauera aromatica
cyclohexa-1,5-diene-1-carbonyl-CoA + acceptor + ADP + phosphate
-
-
-
?
benzoyl-CoA + reduced acceptor + ATP + H2O
central enzyme in the anaerobic degradation of organic carbon
671412
Azoarcus evansii
cyclohexa-1,5-diene-1-carbonyl-CoA + acceptor + ADP + phosphate
-
-
-
?
benzoyl-CoA + reduced acceptor + ATP + H2O
central enzyme in the anaerobic degradation of organic carbon
671412
Azoarcus tolulyticus
cyclohexa-1,5-diene-1-carbonyl-CoA + acceptor + ADP + phosphate
-
-
-
?
benzoyl-CoA + reduced acceptor + ATP + H2O
central enzyme in the anaerobic degradation of organic carbon
671412
Thauera chlorobenzoica
cyclohexa-1,5-diene-1-carbonyl-CoA + acceptor + ADP + phosphate
-
-
-
?
benzoyl-CoA + reduced acceptor + ATP + H2O
central enzyme in the anaerobic degradation of organic carbon
671412
Azoarcus toluvorans
cyclohexa-1,5-diene-1-carbonyl-CoA + acceptor + ADP + phosphate
-
-
-
?
benzoyl-CoA + reduced acceptor + ATP + H2O
central enzyme in the anaerobic degradation of organic carbon
671412
Azoarcus toluclasticus
cyclohexa-1,5-diene-1-carbonyl-CoA + acceptor + ADP + phosphate
-
-
-
?
benzoyl-CoA + reduced acceptor + ATP + H2O
central enzyme in the anaerobic degradation of organic carbon
671412
Rhodopseudomonas palustris
cyclohexa-1,5-diene-1-carbonyl-CoA + acceptor + ADP + phosphate
-
-
-
?
benzoyl-CoA + reduced acceptor + ATP + H2O
central enzyme in the anaerobic degradation of organic carbon
671412
Thauera selenatis 3CB-1
cyclohexa-1,5-diene-1-carbonyl-CoA + acceptor + ADP + phosphate
-
-
-
?
benzoyl-CoA + reduced acceptor + ATP + H2O
central enzyme in the anaerobic degradation of organic carbon
671412
Acidovorax sp. 2FB7
cyclohexa-1,5-diene-1-carbonyl-CoA + acceptor + ADP + phosphate
-
-
-
?
benzoyl-CoA + reduced acceptor + ATP + H2O
central enzyme in the anaerobic degradation of organic carbon
671412
Thauera chlorobenzoica 3CB-1
cyclohexa-1,5-diene-1-carbonyl-CoA + acceptor + ADP + phosphate
-
-
-
?
Other publictions for EC 1.3.7.8
No.
1st author
Pub Med
title
organims
journal
volume
pages
year
Activating Compound
Application
Cloned(Commentary)
Crystallization (Commentary)
Engineering
General Stability
Inhibitors
KM Value [mM]
Localization
Metals/Ions
Molecular Weight [Da]
Natural Substrates/ Products (Substrates)
Organic Solvent Stability
Organism
Oxidation Stability
Posttranslational Modification
Purification (Commentary)
Reaction
Renatured (Commentary)
Source Tissue
Specific Activity [micromol/min/mg]
Storage Stability
Substrates and Products (Substrate)
Subunits
Temperature Optimum [°C]
Temperature Range [°C]
Temperature Stability [°C]
Turnover Number [1/s]
pH Optimum
pH Range
pH Stability
Cofactor
Ki Value [mM]
pI Value
IC50 Value
Activating Compound (protein specific)
Application (protein specific)
Cloned(Commentary) (protein specific)
Cofactor (protein specific)
Crystallization (Commentary) (protein specific)
Engineering (protein specific)
General Stability (protein specific)
IC50 Value (protein specific)
Inhibitors (protein specific)
Ki Value [mM] (protein specific)
KM Value [mM] (protein specific)
Localization (protein specific)
Metals/Ions (protein specific)
Molecular Weight [Da] (protein specific)
Natural Substrates/ Products (Substrates) (protein specific)
Organic Solvent Stability (protein specific)
Oxidation Stability (protein specific)
Posttranslational Modification (protein specific)
Purification (Commentary) (protein specific)
Renatured (Commentary) (protein specific)
Source Tissue (protein specific)
Specific Activity [micromol/min/mg] (protein specific)
Storage Stability (protein specific)
Substrates and Products (Substrate) (protein specific)
Subunits (protein specific)
Temperature Optimum [°C] (protein specific)
Temperature Range [°C] (protein specific)
Temperature Stability [°C] (protein specific)
Turnover Number [1/s] (protein specific)
pH Optimum (protein specific)
pH Range (protein specific)
pH Stability (protein specific)
pI Value (protein specific)
Expression
General Information
General Information (protein specific)
Expression (protein specific)
KCat/KM [mM/s]
KCat/KM [mM/s] (protein specific)
729651
Schmid
Enzymes of the benzoyl-coenzym ...
Ferroglobus placidus
Environ. Microbiol.
17
3289-3300
2015
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726004
Kuntze
Enzymes involved in the anaero ...
Thauera chlorobenzoica, Thauera chlorobenzoica 3CB-1
Mol. Microbiol.
82
758-769
2011
1
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1
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1
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9
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3
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6
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9
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6
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12
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1
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1
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1
2
2
1
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700199
Heintz
Differential membrane proteome ...
Geobacter metallireducens
Mol. Cell. Proteomics
8
2159-2169
2009
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1
4
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1
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4
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1
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692753
Thiele
Mechanism of enzymatic Birch r ...
Thauera aromatica
J. Am. Chem. Soc.
130
14050-14051
2008
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1
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1
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674313
Peres
BadM is a transcriptional repr ...
Rhodopseudomonas palustris
J. Bacteriol.
188
8662-8665
2006
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1
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1
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-
671412
Song
Genetic diversity of benzoyl c ...
Acidovorax sp., Acidovorax sp. 2FB7, Azoarcus evansii, Azoarcus toluclasticus, Azoarcus tolulyticus, Azoarcus toluvorans, Magnetospirillum magnetotacticum, Rhodopseudomonas palustris, Thauera aromatica, Thauera chlorobenzoica, Thauera chlorobenzoica 3CB-1, Thauera selenatis, Thauera selenatis 3CB-1
Appl. Environ. Microbiol.
71
2036-2045
2005
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10
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20
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30
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20
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17
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20
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20
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676054
Carmona
Iron-reducing bacteria unravel ...
Azoarcus sp., Thauera aromatica
Mol. Microbiol.
58
1210-1215
2005
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2
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4
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4
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654733
Mobitz
Substrate binding and reductio ...
Thauera aromatica
Biochemistry
43
1376-1385
2004
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1
11
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3
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1
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12
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1
1
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1
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1
1
11
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12
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1
1
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657182
Unciuleac
Mechanism of ATP-driven electr ...
Thauera aromatica
Proc. Natl. Acad. Sci. USA
98
13619-13624
2001
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285200
Boll
Nonaromatic products from anox ...
Thauera aromatica
J. Biol. Chem.
275
21889-21895
2000
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3
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12557
Boll
Identification, and characteri ...
Thauera aromatica
Eur. J. Biochem.
251
946-954
1998
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1
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1
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4
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12562
Breese
Genes coding the benzoyl-CoA p ...
Thauera aromatica
Eur. J. Biochem.
256
148-154
1998
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1
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5
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1
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288500
Heider
Differential induction of enzy ...
Thauera aromatica
Arch. Microbiol.
170
120-131
1998
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3
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1
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718
Schneider
Anaerobic metabolism of L-phen ...
Thauera aromatica
Arch. Microbiol.
168
310-320
1997
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12558
Boll
Benzoyl-CoA reductase (dearoma ...
Thauera aromatica, Thauera aromatica K172
Eur. J. Biochem.
244
840-851
1997
2
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12559
Boll
Benzoyl-coenzyme A reductase ( ...
Thauera aromatica
Eur. J. Biochem.
234
921-933
1995
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3
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5
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14
1
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1
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14
1
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1
1
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12563
Koch
Enzymatic reduction of benzoyl ...
Pseudomonas sp.
Eur. J. Biochem.
205
195-202
1992
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