Substrate determinants of the course of tartrate dehydrogenase-catalyzed reactions

Serfozo, P.; Tipton, P.A.; Biochemistry 34, 7517-7524 (1995)

Data extracted from this reference:

KM Value [mM]

KM Value Maximum [mM]

Substrate

Commentary

Organism

Structure

0.011

-

(2R,3S)-3-bromomalate

-

Escherichia coli

0.012

-

(2R,3S)-3-chloromalate

-

Escherichia coli

0.019

-

(2R,3S)-3-fluoromalate

-

Escherichia coli

0.024

-

(2R,3R)-3-iodomalate

-

Escherichia coli

0.027

-

(2R,3S)-3-iodomalate

-

Escherichia coli

0.05

-

D-malate

-

Escherichia coli

0.06

-

(2R,3R)-3-methyltartrate

-

Escherichia coli

0.06

-

meso-tartrate

-

Escherichia coli

0.07

-

(2R,3S)-3-methyltartrate

-

Escherichia coli

0.1

-

(+)-tartrate

-

Escherichia coli

0.22

-

(2R,3R)-3-bromomalate

-

Escherichia coli

0.27

-

(2R,3R)-3-chloromalate

-

Escherichia coli

0.67

-

(2R,3R)-3-fluoromalate

-

Escherichia coli

Substrates

Commentary Substrates

Literature (Substrates)

Organism

Products

Commentary (Products)

Literature (Products)

Organism (Products)

Reversibility

Substrate Product ID

(2R,3R)-3-bromomalate + NAD+

oxidative decarboxylation

349359

Escherichia coli

? + CO2 + NADH

-

-

-

?

(2R,3R)-3-chloromalate + NAD+

oxidative decarboxylation

349359

Escherichia coli

? + CO2 + NADH

-

-

-

?

(2R,3R)-3-fluoromalate + NAD+

oxidative decarboxylation

349359

Escherichia coli

? + CO2 + NADH

-

-

-

?

(2R,3R)-3-iodomalate + NAD+

oxidative decarboxylation

349359

Escherichia coli

? + CO2 + NADH

-

-

-

?

(2R,3R)-3-methyltartrate + NAD+

oxidative decarboxylation

349359

Escherichia coli

? + CO2 + NADH

-

-

-

?

(2R,3R)-3-thiomalate + NAD+

-

349359

Escherichia coli

?

-

-

-

?

(2R,3S)-3-bromomalate + NAD+

oxidative decarboxylation

349359

Escherichia coli

? + CO2 + NADH

-

-

-

?

(2R,3S)-3-chloromalate + NAD+

oxidative decarboxylation

349359

Escherichia coli

? + CO2 + NADH

-

-

-

?

(2R,3S)-3-fluoromalate + NAD+

oxidative decarboxylation

349359

Escherichia coli

? + CO2 + NADH

-

-

-

?

(2R,3S)-3-iodomalate + NAD+

oxidative decarboxylation

349359

Escherichia coli

? + CO2 + NADH

-

-

-

?

(2R,3S)-3-methyltartrate + NAD+

simple oxidation

349359

Escherichia coli

? + NADH

-

-

-

?

(2R,3S)-3-thiomalate + NAD+

net non-oxidative decarboxylation

349359

Escherichia coli

?

-

-

-

?

L-(+)-tartrate + NAD+

-

349359

Pseudomonas putida

(3R)-oxaloglycolate + NADH

-

-

-

?

L-(+)-tartrate + NAD+

in presence of Mn2+ and K+ (+)-tartrate is subject to NAD+-dependent oxidation to form oxaloglycolate

349359

Escherichia coli

(3R)-oxaloglycolate + NADH

-

349359

Escherichia coli

?

malate + NAD+

-

349359

Escherichia coli

pyruvate + CO2 + NADH

-

349359

Escherichia coli

?

meso-tartrate + NAD+

-

349359

Escherichia coli

D-glycerate + CO2 + NADH

-

-

-

?

additional information

3R-oxaloglycolate, (2R,3S)-3-aminomalate and (2R,3R)-3-aminomalate are no substrates

349359

Escherichia coli

?

-

-

-

-

KM Value [mM]

KM Value Maximum [mM]

Substrate

Commentary

Organism

Structure

0.011

-

(2R,3S)-3-bromomalate

-

Escherichia coli

0.012

-

(2R,3S)-3-chloromalate

-

Escherichia coli

0.019

-

(2R,3S)-3-fluoromalate

-

Escherichia coli

0.024

-

(2R,3R)-3-iodomalate

-

Escherichia coli

0.027

-

(2R,3S)-3-iodomalate

-

Escherichia coli

0.05

-

D-malate

-

Escherichia coli

0.06

-

(2R,3R)-3-methyltartrate

-

Escherichia coli

0.06

-

meso-tartrate

-

Escherichia coli

0.07

-

(2R,3S)-3-methyltartrate

-

Escherichia coli

0.1

-

(+)-tartrate

-

Escherichia coli

0.22

-

(2R,3R)-3-bromomalate

-

Escherichia coli

0.27

-

(2R,3R)-3-chloromalate

-

Escherichia coli

0.67

-

(2R,3R)-3-fluoromalate

-

Escherichia coli

Substrates

Commentary Substrates

Literature (Substrates)

Organism

Products

Commentary (Products)

Literature (Products)

Organism (Products)

Reversibility

ID

(2R,3R)-3-bromomalate + NAD+

oxidative decarboxylation

349359

Escherichia coli

? + CO2 + NADH

-

-

-

?

(2R,3R)-3-chloromalate + NAD+

oxidative decarboxylation

349359

Escherichia coli

? + CO2 + NADH

-

-

-

?

(2R,3R)-3-fluoromalate + NAD+

oxidative decarboxylation

349359

Escherichia coli

? + CO2 + NADH

-

-

-

?

(2R,3R)-3-iodomalate + NAD+

oxidative decarboxylation

349359

Escherichia coli

? + CO2 + NADH

-

-

-

?

(2R,3R)-3-methyltartrate + NAD+

oxidative decarboxylation

349359

Escherichia coli

? + CO2 + NADH

-

-

-

?

(2R,3R)-3-thiomalate + NAD+

-

349359

Escherichia coli

?

-

-

-

?

(2R,3S)-3-bromomalate + NAD+

oxidative decarboxylation

349359

Escherichia coli

? + CO2 + NADH

-

-

-

?

(2R,3S)-3-chloromalate + NAD+

oxidative decarboxylation

349359

Escherichia coli

? + CO2 + NADH

-

-

-

?

(2R,3S)-3-fluoromalate + NAD+

oxidative decarboxylation

349359

Escherichia coli

? + CO2 + NADH

-

-

-

?

(2R,3S)-3-iodomalate + NAD+

oxidative decarboxylation

349359

Escherichia coli

? + CO2 + NADH

-

-

-

?

(2R,3S)-3-methyltartrate + NAD+

simple oxidation

349359

Escherichia coli

? + NADH

-

-

-

?

(2R,3S)-3-thiomalate + NAD+

net non-oxidative decarboxylation

349359

Escherichia coli

?

-

-

-

?

L-(+)-tartrate + NAD+

-

349359

Pseudomonas putida

(3R)-oxaloglycolate + NADH

-

-

-

?

L-(+)-tartrate + NAD+

in presence of Mn2+ and K+ (+)-tartrate is subject to NAD+-dependent oxidation to form oxaloglycolate

349359

Escherichia coli

(3R)-oxaloglycolate + NADH

-

349359

Escherichia coli

?

malate + NAD+

-

349359

Escherichia coli

pyruvate + CO2 + NADH

-

349359

Escherichia coli

?

meso-tartrate + NAD+

-

349359

Escherichia coli

D-glycerate + CO2 + NADH

-

-

-

?

additional information

3R-oxaloglycolate, (2R,3S)-3-aminomalate and (2R,3R)-3-aminomalate are no substrates

349359

Escherichia coli

?

-

-

-

-

No.

1st author

Pub Med

title

organims

journal

volume

pages

year

Activating Compound

Application

Cloned(Commentary)

Crystallization (Commentary)

Engineering

General Stability

Inhibitors

KM Value [mM]

Localization

Metals/Ions

Molecular Weight [Da]

Natural Substrates/ Products (Substrates)

Organic Solvent Stability

Organism

Oxidation Stability

Posttranslational Modification

Purification (Commentary)

Reaction

Renatured (Commentary)

Source Tissue

Specific Activity [micromol/min/mg]

Storage Stability

Substrates and Products (Substrate)

Subunits

Synonyms

Temperature Optimum [°C]

Temperature Range [°C]

Temperature Stability [°C]

Turnover Number [1/s]

pH Optimum

pH Range

pH Stability

Cofactor

Ki Value [mM]

pI Value

IC50 Value

Activating Compound (protein specific)

Application (protein specific)

Cloned(Commentary) (protein specific)

Cofactor (protein specific)

Crystallization (Commentary) (protein specific)

Engineering (protein specific)

General Stability (protein specific)

IC50 Value (protein specific)

Inhibitors (protein specific)

Ki Value [mM] (protein specific)

KM Value [mM] (protein specific)

Localization (protein specific)

Metals/Ions (protein specific)

Molecular Weight [Da] (protein specific)

Natural Substrates/ Products (Substrates) (protein specific)

Organic Solvent Stability (protein specific)

Oxidation Stability (protein specific)

Posttranslational Modification (protein specific)

Purification (Commentary) (protein specific)

Renatured (Commentary) (protein specific)

Source Tissue (protein specific)

Specific Activity [micromol/min/mg] (protein specific)

Storage Stability (protein specific)

Substrates and Products (Substrate) (protein specific)

Subunits (protein specific)

Temperature Optimum [°C] (protein specific)

Temperature Range [°C] (protein specific)

Temperature Stability [°C] (protein specific)

Turnover Number [1/s] (protein specific)

pH Optimum (protein specific)

pH Range (protein specific)

pH Stability (protein specific)

pI Value (protein specific)

Expression

General Information

General Information (protein specific)

Expression (protein specific)

KCat/KM [mM/s]

KCat/KM [mM/s] (protein specific)

349359

Serfozo

Substrate determinants of the ...

Escherichia coli, Pseudomonas putida

Biochemistry

34

7517-7524

1995

-

-

1

-

-

-

-

13

-

-

-

-

-

2

-

-

1

-

-

-

-

-

17

-

2

-

-

-

-

-

-

-

-

-

-

-

-

-

1

-

-

-

-

-

-

-

13

-

-

-

-

-

-

-

1

-

-

-

-

17

-

-

-

-

-

-

-

-

-

-

-

-

-

-

-

349358

Beecher

Tartrate dehydrogenase-oxalate ...

Escherichia coli

Arch. Biochem. Biophys.

315

255-261

1994

-

-

1

-

-

-

1

8

-

-

-

-

-

1

-

-

1

1

-

-

-

-

4

-

2

-

-

-

2

-

-

-

4

-

-

-

-

-

1

4

-

-

-

-

1

-

8

-

-

-

-

-

-

-

1

-

-

-

-

4

-

-

-

-

2

-

-

-

-

-

-

-

-

-

-

287509

Do Nascimento

The stereospecificity of seque ...

Pseudomonas putida, Pseudomonas putida ATCC 17642

Biochem. J.

149

553-557

1975

-

-

-

-

-

-

-

-

-

-

-

-

-

2

-

-

1

-

-

-

-

-

2

-

-

-

-

-

-

-

-

-

-

-

-

-

-

-

-

-

-

-

-

-

-

-

-

-

-

-

-

-

-

-

1

-

-

-

-

2

-

-

-

-

-

-

-

-

-

-

-

-

-

-

-

349356

Kohn

-

L- and mesotartaric acid dehyd ...

Bos taurus, Pseudomonas putida, Pseudomonas sp., Pseudomonas sp. A, Rattus norvegicus

Methods Enzymol.

9

236-240

1966

1

-

-

1

-

-

-

4

2

1

-

3

-

9

-

-

1

-

-

-

1

-

5

-

-

-

-

-

-

2

-

-

-

-

-

-

1

-

-

-

1

-

-

-

-

-

4

2

1

-

3

-

-

-

1

-

-

1

-

5

-

-

-

-

-

2

-

-

-

-

-

-

-

-

-