BRENDA - Enzyme Database
show all sequences of 1.3.1.10

Mechanism and inhibition of saFabI, the enoyl reductase from Staphylococcus aureus

Xu, H.; Sullivan, T.J.; Sekiguchi, J.; Kirikae, T.; Ojima, I.; Stratton, C.F.; Mao, W.; Rock, F.L.; Alley, M.R.; Johnson, F.; Walker, S.G.; Tonge, P.J.; Biochemistry 47, 4228-4236 (2008) View publication on PubMedView publication on EuropePMC

Data extracted from this reference:

Cloned(Commentary)
Cloned (Commentary)
Organism
expressed in Escherichia coli BL21(DE3)pLysS cells
Staphylococcus aureus
Engineering
Protein Variants
Commentary
Organism
A95V
the mutant correlates with resistance to diphenyl ethers and causes a significant reduction in the affinity of the inhibitors for the enzyme
Staphylococcus aureus
F204S
inactive, the mutant correlates with resistance to diphenyl ethers and causes a significant reduction in the affinity of the inhibitors for the enzyme
Staphylococcus aureus
I193S
the mutant correlates with resistance to diphenyl ethers and causes a significant reduction in the affinity of the inhibitors for the enzyme
Staphylococcus aureus
K41N
strongly decreased activity for NADPH and increased activity with NADH
Staphylococcus aureus
R40Q
strongly decreased activity for NADPH and increased activity with NADH
Staphylococcus aureus
R40Q/K41N
strongly decreased activity for NADPH and increased activity with NADH
Staphylococcus aureus
Inhibitors
Inhibitors
Commentary
Organism
Structure
5-chloro-2-phenoxyphenol
-
Staphylococcus aureus
5-ethyl-2-phenoxyphenol
-
Staphylococcus aureus
triclosan
-
Staphylococcus aureus
KM Value [mM]
KM Value [mM]
KM Value Maximum [mM]
Substrate
Commentary
Organism
Structure
0.0045
-
dodecenoyl-[Staphylococcus aureus acyl carrier protein]
wild type enzyme, at 25°C, in 100 mM Na2HPO4 buffer (pH 7.8)
Staphylococcus aureus
0.008
-
Crotonyl-N-acetyl-cysteamine
wild type enzyme, at 25°C, in 100 mM Na2HPO4 buffer (pH 7.8)
Staphylococcus aureus
0.0114
-
dodecenoyl-[Staphylococcus aureus acyl carrier protein]
mutant enzyme A95V, at 25°C, in 100 mM Na2HPO4 buffer (pH 7.8)
Staphylococcus aureus
0.0115
-
crotonyl-[Staphylococcus aureus acyl carrier protein]
wild type enzyme, at 25°C, in 100 mM Na2HPO4 buffer (pH 7.8)
Staphylococcus aureus
0.0184
-
dodecenoyl-[Staphylococcus aureus acyl carrier protein]
mutant enzyme F204S, at 25°C, in 100 mM Na2HPO4 buffer (pH 7.8)
Staphylococcus aureus
0.0233
-
dodecenoyl-N-acetyl-cysteamine
wild type enzyme, at 25°C, in 100 mM Na2HPO4 buffer (pH 7.8)
Staphylococcus aureus
0.0241
-
dodec-2-enoyl-CoA
wild type enzyme, at 25°C, in 100 mM Na2HPO4 buffer (pH 7.8)
Staphylococcus aureus
0.2694
-
NADPH
mutant enzyme A95V, at 25°C, in 100 mM Na2HPO4 buffer (pH 7.8)
Staphylococcus aureus
0.4296
-
NADPH
mutant enzyme F204S, at 25°C, in 100 mM Na2HPO4 buffer (pH 7.8)
Staphylococcus aureus
1
-
NADPH
Km above 1 mM, mutant enzyme I193S, at 25°C, in 100 mM Na2HPO4 buffer (pH 7.8)
Staphylococcus aureus
Molecular Weight [Da]
Molecular Weight [Da]
Molecular Weight Maximum [Da]
Commentary
Organism
30000
-
SDS-PAGE
Staphylococcus aureus
Organism
Organism
UniProt
Commentary
Textmining
Staphylococcus aureus
-
-
-
Purification (Commentary)
Purification (Commentary)
Organism
Ni2+-NTA resin chromatography
Staphylococcus aureus
Substrates and Products (Substrate)
Substrates
Commentary Substrates
Literature (Substrates)
Organism
Products
Commentary (Products)
Literature (Products)
Organism (Products)
Reversibility
Substrate Product ID
crotonyl-N-acetyl-cysteamine + NADPH + H+
-
685233
Staphylococcus aureus
butyryl-N-acetyl-cysteamine + NADP+
-
-
-
?
crotonyl-[Staphylococcus aureus acyl carrier protein] + NADPH + H+
-
685233
Staphylococcus aureus
butyryl-[Staphylococcus aureus acyl carrier protein] + NADP+
-
-
-
?
dodec-2-enoyl-CoA + NADPH + H+
-
685233
Staphylococcus aureus
dodecanoyl-CoA + NADP+
-
-
-
r
dodecenoyl-CoA + NADPH + H+
-
685233
Staphylococcus aureus
dodecanoyl-CoA + NADP+
-
-
-
?
dodecenoyl-N-acetyl-cysteamine + NADPH + H+
-
685233
Staphylococcus aureus
dodecanoyl-N-acetyl-cysteamine + NADP+
-
-
-
?
dodecenoyl-[Staphylococcus aureus acyl carrier protein] + NADPH + H+
-
685233
Staphylococcus aureus
dodecanoyl-[Staphylococcus aureus acyl carrier protein] + NADP+
-
-
-
?
additional information
no activity with crotonyl-CoA and NADH
685233
Staphylococcus aureus
?
-
-
-
?
trans-2,3-dehydroacyl-[acyl-carrier protein] + NADPH + H+
prefers acyl carrier protein substrates carrying fatty acids with long acyl chains
685233
Staphylococcus aureus
acyl-[acyl-carrier protein] + NADP+
-
-
-
?
Synonyms
Synonyms
Commentary
Organism
enoyl reductase
-
Staphylococcus aureus
FabI
-
Staphylococcus aureus
Turnover Number [1/s]
Turnover Number Minimum [1/s]
Turnover Number Maximum [1/s]
Substrate
Commentary
Organism
Structure
1.5
-
Crotonyl-N-acetyl-cysteamine
wild type enzyme, at 25°C, in 100 mM Na2HPO4 buffer (pH 7.8)
Staphylococcus aureus
11.6
-
crotonyl-[Staphylococcus aureus acyl carrier protein]
wild type enzyme, at 25°C, in 100 mM Na2HPO4 buffer (pH 7.8)
Staphylococcus aureus
18
-
dodec-2-enoyl-CoA
wild type enzyme, at 25°C, in 100 mM Na2HPO4 buffer (pH 7.8)
Staphylococcus aureus
18.4
-
dodecenoyl-[Staphylococcus aureus acyl carrier protein]
mutant enzyme A95V, at 25°C, in 100 mM Na2HPO4 buffer (pH 7.8)
Staphylococcus aureus
30.4
-
dodecenoyl-N-acetyl-cysteamine
wild type enzyme, at 25°C, in 100 mM Na2HPO4 buffer (pH 7.8)
Staphylococcus aureus
130.2
-
NADPH
wild type enzyme, at 25°C, in 100 mM Na2HPO4 buffer (pH 7.8)
Staphylococcus aureus
130.2
-
dodecenoyl-[Staphylococcus aureus acyl carrier protein]
wild type enzyme, at 25°C, in 100 mM Na2HPO4 buffer (pH 7.8)
Staphylococcus aureus
157.3
-
dodecenoyl-[Staphylococcus aureus acyl carrier protein]
mutant enzyme F204S, at 25°C, in 100 mM Na2HPO4 buffer (pH 7.8)
Staphylococcus aureus
Cofactor
Cofactor
Commentary
Organism
Structure
NADPH
dependent
Staphylococcus aureus
Cloned(Commentary) (protein specific)
Commentary
Organism
expressed in Escherichia coli BL21(DE3)pLysS cells
Staphylococcus aureus
Cofactor (protein specific)
Cofactor
Commentary
Organism
Structure
NADPH
dependent
Staphylococcus aureus
Engineering (protein specific)
Protein Variants
Commentary
Organism
A95V
the mutant correlates with resistance to diphenyl ethers and causes a significant reduction in the affinity of the inhibitors for the enzyme
Staphylococcus aureus
F204S
inactive, the mutant correlates with resistance to diphenyl ethers and causes a significant reduction in the affinity of the inhibitors for the enzyme
Staphylococcus aureus
I193S
the mutant correlates with resistance to diphenyl ethers and causes a significant reduction in the affinity of the inhibitors for the enzyme
Staphylococcus aureus
K41N
strongly decreased activity for NADPH and increased activity with NADH
Staphylococcus aureus
R40Q
strongly decreased activity for NADPH and increased activity with NADH
Staphylococcus aureus
R40Q/K41N
strongly decreased activity for NADPH and increased activity with NADH
Staphylococcus aureus
Inhibitors (protein specific)
Inhibitors
Commentary
Organism
Structure
5-chloro-2-phenoxyphenol
-
Staphylococcus aureus
5-ethyl-2-phenoxyphenol
-
Staphylococcus aureus
triclosan
-
Staphylococcus aureus
KM Value [mM] (protein specific)
KM Value [mM]
KM Value Maximum [mM]
Substrate
Commentary
Organism
Structure
0.0045
-
dodecenoyl-[Staphylococcus aureus acyl carrier protein]
wild type enzyme, at 25°C, in 100 mM Na2HPO4 buffer (pH 7.8)
Staphylococcus aureus
0.008
-
Crotonyl-N-acetyl-cysteamine
wild type enzyme, at 25°C, in 100 mM Na2HPO4 buffer (pH 7.8)
Staphylococcus aureus
0.0114
-
dodecenoyl-[Staphylococcus aureus acyl carrier protein]
mutant enzyme A95V, at 25°C, in 100 mM Na2HPO4 buffer (pH 7.8)
Staphylococcus aureus
0.0115
-
crotonyl-[Staphylococcus aureus acyl carrier protein]
wild type enzyme, at 25°C, in 100 mM Na2HPO4 buffer (pH 7.8)
Staphylococcus aureus
0.0184
-
dodecenoyl-[Staphylococcus aureus acyl carrier protein]
mutant enzyme F204S, at 25°C, in 100 mM Na2HPO4 buffer (pH 7.8)
Staphylococcus aureus
0.0233
-
dodecenoyl-N-acetyl-cysteamine
wild type enzyme, at 25°C, in 100 mM Na2HPO4 buffer (pH 7.8)
Staphylococcus aureus
0.0241
-
dodec-2-enoyl-CoA
wild type enzyme, at 25°C, in 100 mM Na2HPO4 buffer (pH 7.8)
Staphylococcus aureus
0.2694
-
NADPH
mutant enzyme A95V, at 25°C, in 100 mM Na2HPO4 buffer (pH 7.8)
Staphylococcus aureus
0.4296
-
NADPH
mutant enzyme F204S, at 25°C, in 100 mM Na2HPO4 buffer (pH 7.8)
Staphylococcus aureus
1
-
NADPH
Km above 1 mM, mutant enzyme I193S, at 25°C, in 100 mM Na2HPO4 buffer (pH 7.8)
Staphylococcus aureus
Molecular Weight [Da] (protein specific)
Molecular Weight [Da]
Molecular Weight Maximum [Da]
Commentary
Organism
30000
-
SDS-PAGE
Staphylococcus aureus
Purification (Commentary) (protein specific)
Commentary
Organism
Ni2+-NTA resin chromatography
Staphylococcus aureus
Substrates and Products (Substrate) (protein specific)
Substrates
Commentary Substrates
Literature (Substrates)
Organism
Products
Commentary (Products)
Literature (Products)
Organism (Products)
Reversibility
ID
crotonyl-N-acetyl-cysteamine + NADPH + H+
-
685233
Staphylococcus aureus
butyryl-N-acetyl-cysteamine + NADP+
-
-
-
?
crotonyl-[Staphylococcus aureus acyl carrier protein] + NADPH + H+
-
685233
Staphylococcus aureus
butyryl-[Staphylococcus aureus acyl carrier protein] + NADP+
-
-
-
?
dodec-2-enoyl-CoA + NADPH + H+
-
685233
Staphylococcus aureus
dodecanoyl-CoA + NADP+
-
-
-
r
dodecenoyl-CoA + NADPH + H+
-
685233
Staphylococcus aureus
dodecanoyl-CoA + NADP+
-
-
-
?
dodecenoyl-N-acetyl-cysteamine + NADPH + H+
-
685233
Staphylococcus aureus
dodecanoyl-N-acetyl-cysteamine + NADP+
-
-
-
?
dodecenoyl-[Staphylococcus aureus acyl carrier protein] + NADPH + H+
-
685233
Staphylococcus aureus
dodecanoyl-[Staphylococcus aureus acyl carrier protein] + NADP+
-
-
-
?
additional information
no activity with crotonyl-CoA and NADH
685233
Staphylococcus aureus
?
-
-
-
?
trans-2,3-dehydroacyl-[acyl-carrier protein] + NADPH + H+
prefers acyl carrier protein substrates carrying fatty acids with long acyl chains
685233
Staphylococcus aureus
acyl-[acyl-carrier protein] + NADP+
-
-
-
?
Turnover Number [1/s] (protein specific)
Turnover Number Minimum [1/s]
Turnover Number Maximum [1/s]
Substrate
Commentary
Organism
Structure
1.5
-
Crotonyl-N-acetyl-cysteamine
wild type enzyme, at 25°C, in 100 mM Na2HPO4 buffer (pH 7.8)
Staphylococcus aureus
11.6
-
crotonyl-[Staphylococcus aureus acyl carrier protein]
wild type enzyme, at 25°C, in 100 mM Na2HPO4 buffer (pH 7.8)
Staphylococcus aureus
18
-
dodec-2-enoyl-CoA
wild type enzyme, at 25°C, in 100 mM Na2HPO4 buffer (pH 7.8)
Staphylococcus aureus
18.4
-
dodecenoyl-[Staphylococcus aureus acyl carrier protein]
mutant enzyme A95V, at 25°C, in 100 mM Na2HPO4 buffer (pH 7.8)
Staphylococcus aureus
30.4
-
dodecenoyl-N-acetyl-cysteamine
wild type enzyme, at 25°C, in 100 mM Na2HPO4 buffer (pH 7.8)
Staphylococcus aureus
130.2
-
NADPH
wild type enzyme, at 25°C, in 100 mM Na2HPO4 buffer (pH 7.8)
Staphylococcus aureus
130.2
-
dodecenoyl-[Staphylococcus aureus acyl carrier protein]
wild type enzyme, at 25°C, in 100 mM Na2HPO4 buffer (pH 7.8)
Staphylococcus aureus
157.3
-
dodecenoyl-[Staphylococcus aureus acyl carrier protein]
mutant enzyme F204S, at 25°C, in 100 mM Na2HPO4 buffer (pH 7.8)
Staphylococcus aureus
Other publictions for EC 1.3.1.10
No.
1st author
Pub Med
title
organims
journal
volume
pages
year
Activating Compound
Application
Cloned(Commentary)
Crystallization (Commentary)
Engineering
General Stability
Inhibitors
KM Value [mM]
Localization
Metals/Ions
Molecular Weight [Da]
Natural Substrates/ Products (Substrates)
Organic Solvent Stability
Organism
Oxidation Stability
Posttranslational Modification
Purification (Commentary)
Reaction
Renatured (Commentary)
Source Tissue
Specific Activity [micromol/min/mg]
Storage Stability
Substrates and Products (Substrate)
Subunits
Synonyms
Temperature Optimum [°C]
Temperature Range [°C]
Temperature Stability [°C]
Turnover Number [1/s]
pH Optimum
pH Range
pH Stability
Cofactor
Ki Value [mM]
pI Value
IC50 Value
Activating Compound (protein specific)
Application (protein specific)
Cloned(Commentary) (protein specific)
Cofactor (protein specific)
Crystallization (Commentary) (protein specific)
Engineering (protein specific)
General Stability (protein specific)
IC50 Value (protein specific)
Inhibitors (protein specific)
Ki Value [mM] (protein specific)
KM Value [mM] (protein specific)
Localization (protein specific)
Metals/Ions (protein specific)
Molecular Weight [Da] (protein specific)
Natural Substrates/ Products (Substrates) (protein specific)
Organic Solvent Stability (protein specific)
Oxidation Stability (protein specific)
Posttranslational Modification (protein specific)
Purification (Commentary) (protein specific)
Renatured (Commentary) (protein specific)
Source Tissue (protein specific)
Specific Activity [micromol/min/mg] (protein specific)
Storage Stability (protein specific)
Substrates and Products (Substrate) (protein specific)
Subunits (protein specific)
Temperature Optimum [°C] (protein specific)
Temperature Range [°C] (protein specific)
Temperature Stability [°C] (protein specific)
Turnover Number [1/s] (protein specific)
pH Optimum (protein specific)
pH Range (protein specific)
pH Stability (protein specific)
pI Value (protein specific)
Expression
General Information
General Information (protein specific)
Expression (protein specific)
KCat/KM [mM/s]
KCat/KM [mM/s] (protein specific)
740013
Dutta
Crystal structure of hexanoyl- ...
Mycobacterium tuberculosis
Biochem. J.
450
127-139
2013
-
-
-
-
-
-
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-
-
-
-
1
-
1
-
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-
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3
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2
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1
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1
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1
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-
-
-
3
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
740716
Yao
Resistance to AFN-1252 arises ...
Staphylococcus aureus, Staphylococcus aureus RN4220
J. Biol. Chem.
288
36261-36271
2013
-
-
1
-
3
-
2
-
-
-
-
-
-
27
-
-
1
-
-
-
-
-
4
-
2
-
-
-
3
-
-
-
2
2
-
-
-
-
1
2
-
3
-
-
2
2
-
-
-
-
-
-
-
-
1
-
-
-
-
4
-
-
-
-
3
-
-
-
-
-
-
-
-
-
-
726431
Hevener
Expression, purification and c ...
Porphyromonas gingivalis, Porphyromonas gingivalis W83
Protein Expr. Purif.
85
100-108
2012
1
-
1
-
-
1
1
2
-
-
1
-
1
5
-
-
1
-
-
-
-
1
4
1
2
-
-
-
-
1
-
-
3
1
-
-
1
-
1
3
-
-
1
-
1
1
2
-
-
1
-
1
-
-
1
-
-
-
1
4
1
-
-
-
-
1
-
-
-
-
-
-
-
-
-
711113
Kim
Dimeric and tetrameric forms o ...
Bacillus cereus, Bacillus cereus 6A5, Bacillus cereus DSM 31
Biochem. Biophys. Res. Commun.
400
517-522
2010
-
-
1
2
-
-
2
-
-
-
-
4
-
9
-
-
1
-
-
-
-
-
6
4
6
-
-
-
-
-
-
-
2
1
-
-
-
-
1
2
2
-
-
-
3
1
-
-
-
-
4
-
-
-
1
-
-
-
-
6
4
-
-
-
-
-
-
-
-
-
2
2
-
-
-
703756
Gurvitz
A novel circuit overrides Adr1 ...
Saccharomyces cerevisiae
FEMS Microbiol. Lett.
297
255-260
2009
-
-
-
-
-
-
-
-
3
-
-
-
-
4
-
-
-
-
-
-
-
-
1
-
2
1
-
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-
1
-
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3
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-
-
1
-
1
-
-
-
1
-
-
-
1
-
-
1
-
-
711351
Kwon
Aquastatin A, a new inhibitor ...
Staphylococcus aureus
Biol. Pharm. Bull.
32
2061-2064
2009
-
1
-
-
-
-
2
-
-
-
-
-
-
7
-
-
-
-
-
-
-
-
1
-
3
1
-
-
-
1
-
-
1
2
-
2
-
1
-
1
-
-
-
2
2
2
-
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-
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-
-
-
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-
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-
1
-
1
-
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-
1
-
-
-
-
-
-
-
-
-
685233
Xu
Mechanism and inhibition of sa ...
Staphylococcus aureus
Biochemistry
47
4228-4236
2008
-
-
1
-
6
-
3
10
-
-
1
-
-
4
-
-
1
-
-
-
-
-
8
-
2
-
-
-
8
-
-
-
1
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-
-
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-
1
1
-
6
-
-
3
-
10
-
-
1
-
-
-
-
1
-
-
-
-
8
-
-
-
-
8
-
-
-
-
-
-
-
-
-
-
684170
Kim
Crystallization and preliminar ...
Bacillus subtilis, Bacillus subtilis 168
Acta Crystallogr. Sect. F
63
246-248
2007
-
-
1
1
-
-
-
-
-
-
-
-
-
103
-
-
1
-
-
-
-
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2
-
3
-
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1
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1
1
1
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1
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2
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-
656515
Airenne
Structure-function analysis of ...
Candida tropicalis, Saccharomyces cerevisiae
J. Mol. Biol.
327
47-59
2003
-
-
2
1
2
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4
-
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2
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6
-
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2
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2
-
5
-
8
-
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-
2
-
-
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-
2
2
1
2
-
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-
-
-
4
-
-
2
-
-
-
2
-
-
2
-
5
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
390504
Heath
Inhibition of the Staphylococc ...
Escherichia coli, Staphylococcus aureus
J. Biol. Chem.
275
4654-4659
2000
-
-
1
-
1
-
2
4
-
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2
-
7
-
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1
-
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4
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1
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1
1
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1
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3
-
4
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2
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1
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-
4
-
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-
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-
-
-
-
-
390505
Heath
The enoyl-[acyl-carrier-protei ...
Bacillus subtilis
J. Biol. Chem.
275
40128-40133
2000
-
-
2
-
1
-
1
2
-
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3
-
5
-
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2
-
-
-
4
-
9
-
3
1
-
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-
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1
-
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1
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2
1
-
1
-
1
3
-
2
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-
3
-
-
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2
-
-
4
-
9
-
1
-
-
-
-
-
-
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-
1
1
-
-
-
390508
Heath
A triclosan-resistant bacteria ...
Streptococcus pneumoniae
Nature
406
145-146
2000
-
-
1
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1
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1
1
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1
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1
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2
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2
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1
2
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1
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1
1
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1
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2
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Turnowsky
EnvM genes of Salmonella typhi ...
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390496
Saito
Steric course of reaction cata ...
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390497
Sedgwick
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390501
Saito
Incorporation of hydrogen atom ...
Escherichia coli
Biochim. Biophys. Acta
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202-213
1980
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Seyama
Origin of hydrogen atoms in th ...
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390499
Weeks
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Enoyl acyl carrier protein red ...
Escherichia coli
Methods Enzymol.
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1969
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390500
Weeks
Studies on the mechanism of fa ...
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1968
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